RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 KCTD19Q17RG1 926 aaPredicted RBP17.5■□□□□ 0.39
CPSF4-201ENST00000292476 MDH1BQ5I0G3 518 aa17.5■□□□□ 0.39
CPSF4-201ENST00000292476 EFHC1Q5JVL4 640 aa17.5■□□□□ 0.39
CPSF4-201ENST00000292476 POLNQ7Z5Q5 900 aa17.5■□□□□ 0.39
CPSF4-201ENST00000292476 PIGWQ7Z7B1 504 aa17.5■□□□□ 0.39
CPSF4-201ENST00000292476 ZNF280BQ86YH2 543 aa17.5■□□□□ 0.39
CPSF4-201ENST00000292476 FUKQ8N0W3 1084 aa17.5■□□□□ 0.39
CPSF4-201ENST00000292476 CASD1Q96PB1 797 aa17.5■□□□□ 0.39
CPSF4-201ENST00000292476 USTQ9Y2C2 406 aa17.5■□□□□ 0.39
CPSF4-201ENST00000292476 R3HDM2Q9Y2K5 976 aaKnown RBP17.5■□□□□ 0.39
CPSF4-201ENST00000292476 ZBBXA8MT70 800 aa17.49■□□□□ 0.39
CPSF4-201ENST00000292476 H0YHG0 523 aa17.49■□□□□ 0.39
CPSF4-201ENST00000292476 TJP3O95049 919 aa17.49■□□□□ 0.39
CPSF4-201ENST00000292476 ACAT1P24752 427 aaKnown RBP17.49■□□□□ 0.39
CPSF4-201ENST00000292476 KLRC2P26717 231 aa17.49■□□□□ 0.39
CPSF4-201ENST00000292476 BRCC3P46736 316 aa17.49■□□□□ 0.39
CPSF4-201ENST00000292476 RGS7P49802 495 aa17.49■□□□□ 0.39
CPSF4-201ENST00000292476 ZNF143P52747 638 aaPredicted RBP17.49■□□□□ 0.39
CPSF4-201ENST00000292476 STAT4Q14765 748 aa17.49■□□□□ 0.39
CPSF4-201ENST00000292476 CD300LGQ6UXG3 332 aa17.49■□□□□ 0.39
CPSF4-201ENST00000292476 FAM183BPQ6ZVS7 135 aa17.49■□□□□ 0.39
CPSF4-201ENST00000292476 EXOC3L1Q86VI1 746 aa17.49■□□□□ 0.39
CPSF4-201ENST00000292476 CCDC77Q9BR77 488 aa17.49■□□□□ 0.39
CPSF4-201ENST00000292476 CNPY3Q9BT09 278 aa17.49■□□□□ 0.39
CPSF4-201ENST00000292476 LRRC4Q9HBW1 653 aa17.49■□□□□ 0.39
CPSF4-201ENST00000292476 DRG1Q9Y295 367 aaKnown RBP17.49■□□□□ 0.39
CPSF4-201ENST00000292476 ABHD14A-ACY1A0A1B0GW23 586 aa17.48■□□□□ 0.39
CPSF4-201ENST00000292476 SMIM23A6NLE4 172 aa17.48■□□□□ 0.39
CPSF4-201ENST00000292476 FBXO21O94952 628 aa17.48■□□□□ 0.39
CPSF4-201ENST00000292476 GPD1P21695 349 aa17.48■□□□□ 0.39
CPSF4-201ENST00000292476 PCK1P35558 622 aa17.48■□□□□ 0.39
CPSF4-201ENST00000292476 CHKAP35790 457 aa17.48■□□□□ 0.39
CPSF4-201ENST00000292476 ANKRD20A8PQ5CZ79 823 aa17.48■□□□□ 0.39
CPSF4-201ENST00000292476 INTS6LQ5JSJ4 861 aaKnown RBP17.48■□□□□ 0.39
CPSF4-201ENST00000292476 HIBCHQ6NVY1 386 aaPredicted RBP17.48■□□□□ 0.39
CPSF4-201ENST00000292476 FAM171BQ6P995 826 aa17.48■□□□□ 0.39
CPSF4-201ENST00000292476 OLFML1Q6UWY5 402 aa17.48■□□□□ 0.39
CPSF4-201ENST00000292476 C4orf50Q6ZRC1 276 aa17.48■□□□□ 0.39
CPSF4-201ENST00000292476 CCDC13Q8IYE1 715 aa17.48■□□□□ 0.39
CPSF4-201ENST00000292476 CRIPAKQ8N1N5 446 aa17.48■□□□□ 0.39
CPSF4-201ENST00000292476 LRRC43Q8N309 656 aa17.48■□□□□ 0.39
CPSF4-201ENST00000292476 ZCCHC9Q8N567 271 aaKnown RBP17.48■□□□□ 0.39
CPSF4-201ENST00000292476 HERVK_113Q902F9 699 aa17.48■□□□□ 0.39
CPSF4-201ENST00000292476 SMARCD1Q96GM5 515 aa17.48■□□□□ 0.39
CPSF4-201ENST00000292476 TTC25Q96NG3 672 aa17.48■□□□□ 0.39
CPSF4-201ENST00000292476 SLITRK1Q96PX8 696 aa17.48■□□□□ 0.39
CPSF4-201ENST00000292476 DDX23Q9BUQ8 820 aaKnown RBP17.48■□□□□ 0.39
CPSF4-201ENST00000292476 OXCT2Q9BYC2 517 aaPredicted RBP17.48■□□□□ 0.39
CPSF4-201ENST00000292476 FRMD8P1Q9BZ68 369 aaPredicted RBP17.48■□□□□ 0.39
CPSF4-201ENST00000292476 PPCSQ9HAB8 311 aa17.48■□□□□ 0.39
CPSF4-201ENST00000292476 CRTAC1Q9NQ79 661 aa17.48■□□□□ 0.39
CPSF4-201ENST00000292476 NINJ2Q9NZG7 142 aa17.48■□□□□ 0.39
CPSF4-201ENST00000292476 SAMD15Q9P1V8 674 aa17.48■□□□□ 0.39
CPSF4-201ENST00000292476 EFR3BQ9Y2G0 817 aa17.48■□□□□ 0.39
CPSF4-201ENST00000292476 TIMM13Q9Y5L4 95 aaPredicted RBP17.48■□□□□ 0.39
CPSF4-201ENST00000292476 SZT2Q5T011 3432 aa17.48■□□□□ 0.39
CPSF4-201ENST00000292476 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.48■□□□□ 0.39
CPSF4-201ENST00000292476 HCRTO43612 131 aa17.48■□□□□ 0.39
CPSF4-201ENST00000292476 LIASO43766 372 aa17.48■□□□□ 0.39
CPSF4-201ENST00000292476 ATP2C2O75185 946 aa17.48■□□□□ 0.39
CPSF4-201ENST00000292476 CDH16O75309 829 aa17.48■□□□□ 0.39
CPSF4-201ENST00000292476 ACSL3O95573 720 aa17.48■□□□□ 0.39
CPSF4-201ENST00000292476 GSTA1P08263 222 aa17.48■□□□□ 0.39
CPSF4-201ENST00000292476 TCTN1Q2MV58 587 aa17.48■□□□□ 0.39
CPSF4-201ENST00000292476 PAN2Q504Q3 1202 aaKnown RBP17.48■□□□□ 0.39
CPSF4-201ENST00000292476 UBAP2Q5T6F2 1119 aaKnown RBP17.48■□□□□ 0.39
CPSF4-201ENST00000292476 IZUMO3Q5VZ72 239 aa17.48■□□□□ 0.39
CPSF4-201ENST00000292476 FAM109BQ6ICB4 259 aaPredicted RBP17.48■□□□□ 0.39
CPSF4-201ENST00000292476 SLC26A9Q7LBE3 791 aa17.48■□□□□ 0.39
CPSF4-201ENST00000292476 FAM35AQ86V20 835 aa17.48■□□□□ 0.39
CPSF4-201ENST00000292476 DCP1BQ8IZD4 617 aaKnown RBP17.48■□□□□ 0.39
CPSF4-201ENST00000292476 CCT6BQ92526 530 aa17.48■□□□□ 0.39
CPSF4-201ENST00000292476 ARHGEF2Q92974 986 aaKnown RBP17.48■□□□□ 0.39
CPSF4-201ENST00000292476 PCED1BQ96HM7 432 aa17.48■□□□□ 0.39
CPSF4-201ENST00000292476 B3GNT5Q9BYG0 378 aa17.48■□□□□ 0.39
CPSF4-201ENST00000292476 PHACTR1Q9C0D0 580 aa17.48■□□□□ 0.39
CPSF4-201ENST00000292476 TJP2Q9UDY2 1190 aa17.48■□□□□ 0.39
CPSF4-201ENST00000292476 ADAM28Q9UKQ2 775 aa17.48■□□□□ 0.39
CPSF4-201ENST00000292476 F8VP50 259 aa17.47■□□□□ 0.39
CPSF4-201ENST00000292476 DPYSL4O14531 572 aa17.47■□□□□ 0.39
CPSF4-201ENST00000292476 OAZ2O95190 189 aa17.47■□□□□ 0.39
CPSF4-201ENST00000292476 GJB6O95452 261 aa17.47■□□□□ 0.39
CPSF4-201ENST00000292476 PDGFRAP16234 1089 aa17.47■□□□□ 0.39
CPSF4-201ENST00000292476 TKTP29401 623 aaKnown RBP17.47■□□□□ 0.39
CPSF4-201ENST00000292476 SDC4P31431 198 aa17.47■□□□□ 0.39
CPSF4-201ENST00000292476 SLCO1A2P46721 670 aa17.47■□□□□ 0.39
CPSF4-201ENST00000292476 NR1H3Q13133 447 aa17.47■□□□□ 0.39
CPSF4-201ENST00000292476 LONRF1Q17RB8 773 aa17.47■□□□□ 0.39
CPSF4-201ENST00000292476 ZFYVE27Q5T4F4 411 aa17.47■□□□□ 0.39
CPSF4-201ENST00000292476 RASIP1Q5U651 963 aa17.47■□□□□ 0.39
CPSF4-201ENST00000292476 PIGZQ86VD9 579 aa17.47■□□□□ 0.39
CPSF4-201ENST00000292476 SCUBE3Q8IX30 993 aa17.47■□□□□ 0.39
CPSF4-201ENST00000292476 SIX6OS1Q8N1H7 587 aa17.47■□□□□ 0.39
CPSF4-201ENST00000292476 JOSD2Q8TAC2 188 aa17.47■□□□□ 0.39
CPSF4-201ENST00000292476 HASPINQ8TF76 798 aa17.47■□□□□ 0.39
CPSF4-201ENST00000292476 NRDE2Q9H7Z3 1164 aa17.47■□□□□ 0.39
CPSF4-201ENST00000292476 PNPLA8Q9NP80 782 aa17.47■□□□□ 0.39
CPSF4-201ENST00000292476 SF3B1O75533 1304 aaKnown RBP eCLIP17.46■□□□□ 0.392e-6■■■■■ 80.4
CPSF4-201ENST00000292476 MYBPHLA2RUH7 354 aa17.46■□□□□ 0.39
CPSF4-201ENST00000292476 C2CD4BA6NLJ0 364 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms