RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 CREB5Q02930 508 aa26.55■■□□□ 1.84
U2AF1-201ENST00000291552 DCAF17Q5H9S7 520 aaPredicted RBP26.55■■□□□ 1.84
U2AF1-201ENST00000291552 EOGTQ5NDL2 527 aa26.55■■□□□ 1.84
U2AF1-201ENST00000291552 C10orf76Q5T2E6 689 aa26.55■■□□□ 1.84
U2AF1-201ENST00000291552 ARHGAP17Q68EM7 881 aa26.55■■□□□ 1.84
U2AF1-201ENST00000291552 FRMD1Q8N878 549 aa26.55■■□□□ 1.84
U2AF1-201ENST00000291552 RLN3Q8WXF3 142 aa26.55■■□□□ 1.84
U2AF1-201ENST00000291552 DNMT3LQ9UJW3 386 aa26.55■■□□□ 1.84
U2AF1-201ENST00000291552 STC2O76061 302 aa26.54■■□□□ 1.84
U2AF1-201ENST00000291552 TYRP14679 529 aa26.54■■□□□ 1.84
U2AF1-201ENST00000291552 STPG1Q5TH74 334 aa26.54■■□□□ 1.84
U2AF1-201ENST00000291552 TCERG1LQ5VWI1 586 aa26.54■■□□□ 1.84
U2AF1-201ENST00000291552 TPGS1Q6ZTW0 290 aa26.54■■□□□ 1.84
U2AF1-201ENST00000291552 ZNF276Q8N554 614 aa26.54■■□□□ 1.84
U2AF1-201ENST00000291552 ZNF513Q8N8E2 541 aaPredicted RBP26.54■■□□□ 1.84
U2AF1-201ENST00000291552 SLC35C1Q96A29 364 aa26.54■■□□□ 1.84
U2AF1-201ENST00000291552 BBS2Q9BXC9 721 aa26.54■■□□□ 1.84
U2AF1-201ENST00000291552 DNAJC17Q9NVM6 304 aaKnown RBP26.54■■□□□ 1.84
U2AF1-201ENST00000291552 LSM7Q9UK45 103 aaKnown RBP26.54■■□□□ 1.84
U2AF1-201ENST00000291552 MAP1BP46821 2468 aaKnown RBP26.54■■□□□ 1.84
U2AF1-201ENST00000291552 KLKB1P03952 638 aa26.53■■□□□ 1.84
U2AF1-201ENST00000291552 ADRB1P08588 477 aa26.53■■□□□ 1.84
U2AF1-201ENST00000291552 FKBP3Q00688 224 aaKnown RBP26.53■■□□□ 1.84
U2AF1-201ENST00000291552 RAB41Q5JT25 222 aa26.53■■□□□ 1.84
U2AF1-201ENST00000291552 EGFLAMQ63HQ2 1017 aa26.53■■□□□ 1.84
U2AF1-201ENST00000291552 GRAMD4Q6IC98 578 aa26.53■■□□□ 1.84
U2AF1-201ENST00000291552 TOGARAM2Q6ZUX3 1019 aa26.53■■□□□ 1.84
U2AF1-201ENST00000291552 PIGZQ86VD9 579 aa26.53■■□□□ 1.84
U2AF1-201ENST00000291552 TTC39CQ8N584 583 aa26.53■■□□□ 1.84
U2AF1-201ENST00000291552 UBR7Q8N806 425 aa26.53■■□□□ 1.84
U2AF1-201ENST00000291552 HMGB4Q8WW32 186 aa26.53■■□□□ 1.84
U2AF1-201ENST00000291552 TSG101Q99816 390 aa26.53■■□□□ 1.84
U2AF1-201ENST00000291552 CLIC5Q9NZA1 410 aa26.53■■□□□ 1.84
U2AF1-201ENST00000291552 MBD1Q9UIS9 605 aaPredicted RBP26.53■■□□□ 1.84
U2AF1-201ENST00000291552 TCRBV21S2A2A0A5A6 115 aa26.52■■□□□ 1.84
U2AF1-201ENST00000291552 TULP2O00295 520 aa26.52■■□□□ 1.84
U2AF1-201ENST00000291552 ALDH1A2O94788 518 aa26.52■■□□□ 1.84
U2AF1-201ENST00000291552 CAVIN2O95810 425 aa26.52■■□□□ 1.84
U2AF1-201ENST00000291552 PLA2G4AP47712 749 aa26.52■■□□□ 1.84
U2AF1-201ENST00000291552 PSEN1P49768 467 aa26.52■■□□□ 1.84
U2AF1-201ENST00000291552 GOLGA8FQ08AF8 430 aa26.52■■□□□ 1.84
U2AF1-201ENST00000291552 GOLGA8DPQ0D2H9 430 aa26.52■■□□□ 1.84
U2AF1-201ENST00000291552 MAP7D1Q3KQU3 841 aa26.52■■□□□ 1.84
U2AF1-201ENST00000291552 BHLHA9Q7RTU4 235 aa26.52■■□□□ 1.84
U2AF1-201ENST00000291552 C11orf74Q86VG3 221 aa26.52■■□□□ 1.84
U2AF1-201ENST00000291552 SMARCE1Q969G3 411 aa26.52■■□□□ 1.84
U2AF1-201ENST00000291552 ACOX2Q99424 681 aa26.52■■□□□ 1.84
U2AF1-201ENST00000291552 FAM124BQ9H5Z6 455 aaPredicted RBP26.52■■□□□ 1.84
U2AF1-201ENST00000291552 CD248Q9HCU0 757 aa26.52■■□□□ 1.84
U2AF1-201ENST00000291552 POLMQ9NP87 494 aaPredicted RBP26.52■■□□□ 1.84
U2AF1-201ENST00000291552 STARD13Q9Y3M8 1113 aa26.52■■□□□ 1.84
U2AF1-201ENST00000291552 CACNA1BQ00975 2339 aa26.51■■□□□ 1.84
U2AF1-201ENST00000291552 ASCC3Q8N3C0 2202 aaKnown RBP26.51■■□□□ 1.84
U2AF1-201ENST00000291552 PRRT4C9JH25 899 aa26.51■■□□□ 1.83
U2AF1-201ENST00000291552 SMC2O95347 1197 aa26.51■■□□□ 1.83
U2AF1-201ENST00000291552 CISD3P0C7P0 127 aa26.51■■□□□ 1.83
U2AF1-201ENST00000291552 CD44P16070 742 aaKnown RBP26.51■■□□□ 1.83
U2AF1-201ENST00000291552 CUL2Q13617 745 aa26.51■■□□□ 1.83
U2AF1-201ENST00000291552 GOLGA7BQ2TAP0 167 aa26.51■■□□□ 1.83
U2AF1-201ENST00000291552 IL31Q6EBC2 164 aa26.51■■□□□ 1.83
U2AF1-201ENST00000291552 ANKRD52Q8NB46 1076 aa26.51■■□□□ 1.83
U2AF1-201ENST00000291552 KCNV2Q8TDN2 545 aa26.51■■□□□ 1.83
U2AF1-201ENST00000291552 TIGD1Q96MW7 591 aa26.51■■□□□ 1.83
U2AF1-201ENST00000291552 UBXN6Q9BZV1 441 aa26.51■■□□□ 1.83
U2AF1-201ENST00000291552 DNAI2Q9GZS0 605 aa26.51■■□□□ 1.83
U2AF1-201ENST00000291552 WDR35Q9P2L0 1181 aa26.51■■□□□ 1.83
U2AF1-201ENST00000291552 RASAL2Q9UJF2 1139 aa26.51■■□□□ 1.83
U2AF1-201ENST00000291552 A0A1W2PQF6 199 aa26.5■■□□□ 1.83
U2AF1-201ENST00000291552 GOLGA6L4A6NEF3 574 aa26.5■■□□□ 1.83
U2AF1-201ENST00000291552 WASP42768 502 aa26.5■■□□□ 1.83
U2AF1-201ENST00000291552 NUCB2P80303 420 aa26.5■■□□□ 1.83
U2AF1-201ENST00000291552 LRRC63Q05C16 580 aa26.5■■□□□ 1.83
U2AF1-201ENST00000291552 BECN1Q14457 450 aa26.5■■□□□ 1.83
U2AF1-201ENST00000291552 BHMTQ93088 406 aa26.5■■□□□ 1.83
U2AF1-201ENST00000291552 EDEM2Q9BV94 578 aa26.5■■□□□ 1.83
U2AF1-201ENST00000291552 PLK2Q9NYY3 685 aa26.5■■□□□ 1.83
U2AF1-201ENST00000291552 BCCIPQ9P287 314 aaKnown RBP eCLIP26.5■■□□□ 1.83
U2AF1-201ENST00000291552 ARMCX3Q9UH62 379 aaPredicted RBP26.5■■□□□ 1.83
U2AF1-201ENST00000291552 LNP1A1A4G5 178 aa26.49■■□□□ 1.83
U2AF1-201ENST00000291552 PATE3B3GLJ2 98 aa26.49■■□□□ 1.83
U2AF1-201ENST00000291552 RALAP11233 206 aa26.49■■□□□ 1.83
U2AF1-201ENST00000291552 HOXB2P14652 356 aa26.49■■□□□ 1.83
U2AF1-201ENST00000291552 GABRG2P18507 467 aa26.49■■□□□ 1.83
U2AF1-201ENST00000291552 EFEMP1Q12805 493 aa26.49■■□□□ 1.83
U2AF1-201ENST00000291552 PREPLQ4J6C6 727 aaPredicted RBP26.49■■□□□ 1.83
U2AF1-201ENST00000291552 CYP2U1Q7Z449 544 aa26.49■■□□□ 1.83
U2AF1-201ENST00000291552 NDRG1Q92597 394 aaKnown RBP26.49■■□□□ 1.83
U2AF1-201ENST00000291552 XPO6Q96QU8 1125 aaKnown RBP26.49■■□□□ 1.83
U2AF1-201ENST00000291552 MAN1B1Q9UKM7 699 aa26.49■■□□□ 1.83
U2AF1-201ENST00000291552 ADAMTS9Q9P2N4 1935 aa26.49■■□□□ 1.83
U2AF1-201ENST00000291552 CKAP5Q14008 2032 aa26.48■■□□□ 1.83
U2AF1-201ENST00000291552 PENKP01210 267 aaPredicted RBP26.48■■□□□ 1.83
U2AF1-201ENST00000291552 HMBSP08397 361 aa26.48■■□□□ 1.83
U2AF1-201ENST00000291552 NTSR1P30989 418 aa26.48■■□□□ 1.83
U2AF1-201ENST00000291552 DHPSP49366 369 aaPredicted RBP26.48■■□□□ 1.83
U2AF1-201ENST00000291552 PDE4CQ08493 712 aa26.48■■□□□ 1.83
U2AF1-201ENST00000291552 RNF43Q68DV7 783 aa26.48■■□□□ 1.83
U2AF1-201ENST00000291552 ISM2Q6H9L7 571 aa26.48■■□□□ 1.83
U2AF1-201ENST00000291552 TRMT11Q7Z4G4 463 aaKnown RBP26.48■■□□□ 1.83
U2AF1-201ENST00000291552 TADA2BQ86TJ2 420 aa26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms