RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 CNGA2Q16280 664 aa11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 BOLA3Q53S33 107 aa11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 PDZK1Q5T2W1 519 aa11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 NSUN4Q96CB9 384 aaKnown RBP11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 NARS2Q96I59 477 aaKnown RBP11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 RXFP1Q9HBX9 757 aa11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 CYP4F12Q9HCS2 524 aa11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 RGS18Q9NS28 235 aa11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 CRLS1Q9UJA2 301 aa11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 LTBP4Q8N2S1 1624 aa11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 PNPLA7Q6ZV29 1317 aa11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 F8VZ95 297 aa11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 PHGDHO43175 533 aaKnown RBP11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 TRAPPC3O43617 180 aa11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 CCT3P49368 545 aaKnown RBP11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 C21orf59P57076 290 aa11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 CD302Q8IX05 232 aa11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 CCDC126Q96EE4 140 aa11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 PACSIN1Q9BY11 444 aa11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 RMND5AQ9H871 391 aa11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 CAPN10Q9HC96 672 aa11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 TRPC7Q9HCX4 862 aa11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 NAGPAQ9UK23 515 aa11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 LSM7Q9UK45 103 aaKnown RBP11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 PLAGL2Q9UPG8 496 aa11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 RUVBL2Q9Y230 463 aaKnown RBP11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 A0A087X0T9 212 aa11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 TK2O00142 265 aa11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 TAF4O00268 1085 aa11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 P4HA2O15460 535 aa11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 PEX1O43933 1283 aa11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 TNFRSF21O75509 655 aa11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 FAM228BP0C875 321 aa11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 FEN1P39748 380 aaKnown RBP11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 NEDD8Q15843 81 aa11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 GJB7Q6PEY0 223 aa11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 LINC00523Q86TU6 105 aa11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 ELOA2Q8IYF1 753 aaPredicted RBP11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 UBA3Q8TBC4 463 aa11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 UBASH3BQ8TF42 649 aa11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 PRCCQ92733 491 aaPredicted RBP11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 BHMTQ93088 406 aa11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 CDC42EP4Q9H3Q1 356 aaKnown RBP11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 TMEM8AQ9HCN3 771 aa11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 AVENQ9NQS1 362 aaPredicted RBP11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 MAP3K20Q9NYL2 800 aaKnown RBP11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 ARIH1Q9Y4X5 557 aaPredicted RBP11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 ATRNO75882 1429 aa11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 CLOCKO15516 846 aa11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 FGFR2P21802 821 aa11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 RFX3P48380 749 aa11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 ARL4DP49703 201 aa11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 ADARP55265 1226 aaKnown RBP11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 SLC34A1Q06495 639 aa11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 VAC14Q08AM6 782 aa11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 COX10Q12887 443 aa11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 OTUD3Q5T2D3 398 aaPredicted RBP11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 PAPD7Q5XG87 772 aaKnown RBP11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 ANKRD49Q8WVL7 239 aa11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 USP13Q92995 863 aaPredicted RBP11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 NDNQ99608 321 aa11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 PI4K2AQ9BTU6 479 aa11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 MKNK1Q9BUB5 465 aa11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 NHSL1Q5SYE7 1610 aa11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 SALL3Q9BXA9 1300 aa11.05□□□□□ -0.64
PKNOX1-201ENST00000291547 TIMM44O43615 452 aa11.05□□□□□ -0.64
PKNOX1-201ENST00000291547 MGRN1O60291 552 aa11.05□□□□□ -0.64
PKNOX1-201ENST00000291547 ALDH1A1P00352 501 aa11.05□□□□□ -0.64
PKNOX1-201ENST00000291547 DPEP1P16444 411 aa11.05□□□□□ -0.64
PKNOX1-201ENST00000291547 ALOX12P18054 663 aa11.05□□□□□ -0.64
PKNOX1-201ENST00000291547 FASP25445 335 aa11.05□□□□□ -0.64
PKNOX1-201ENST00000291547 TNFRSF8P28908 595 aa11.05□□□□□ -0.64
PKNOX1-201ENST00000291547 EPHB2P29323 1055 aa11.05□□□□□ -0.64
PKNOX1-201ENST00000291547 GSTT1P30711 240 aa11.05□□□□□ -0.64
PKNOX1-201ENST00000291547 ACADSBP45954 432 aa11.05□□□□□ -0.64
PKNOX1-201ENST00000291547 TTLL9Q3SXZ7 439 aa11.05□□□□□ -0.64
PKNOX1-201ENST00000291547 AGKQ53H12 422 aa11.05□□□□□ -0.64
PKNOX1-201ENST00000291547 CYP4A22Q5TCH4 519 aa11.05□□□□□ -0.64
PKNOX1-201ENST00000291547 KLHL17Q6TDP4 642 aa11.05□□□□□ -0.64
PKNOX1-201ENST00000291547 ZNF677Q86XU0 584 aa11.05□□□□□ -0.64
PKNOX1-201ENST00000291547 ENKURQ8TC29 256 aa11.05□□□□□ -0.64
PKNOX1-201ENST00000291547 UTP15Q8TED0 518 aaKnown RBP11.05□□□□□ -0.64
PKNOX1-201ENST00000291547 TFB1MQ8WVM0 346 aaKnown RBP11.05□□□□□ -0.64
PKNOX1-201ENST00000291547 PLEKHG4BQ96PX9 1271 aa11.05□□□□□ -0.64
PKNOX1-201ENST00000291547 PAFAH2Q99487 392 aa11.05□□□□□ -0.64
PKNOX1-201ENST00000291547 ATAD3AQ9NVI7 634 aa11.05□□□□□ -0.64
PKNOX1-201ENST00000291547 MRPL39Q9NYK5 338 aaKnown RBP11.05□□□□□ -0.64
PKNOX1-201ENST00000291547 VPS9D1Q9Y2B5 631 aa11.05□□□□□ -0.64
PKNOX1-201ENST00000291547 IPPQ9Y573 584 aa11.05□□□□□ -0.64
PKNOX1-201ENST00000291547 AK9Q5TCS8 1911 aa11.05□□□□□ -0.64
PKNOX1-201ENST00000291547 H2AFYO75367 372 aaKnown RBP11.05□□□□□ -0.64
PKNOX1-201ENST00000291547 ANXA9O76027 345 aa11.05□□□□□ -0.64
PKNOX1-201ENST00000291547 KRT6BP04259 564 aa11.05□□□□□ -0.64
PKNOX1-201ENST00000291547 ATP6V1C1P21283 382 aa11.05□□□□□ -0.64
PKNOX1-201ENST00000291547 BGNP21810 368 aa11.05□□□□□ -0.64
PKNOX1-201ENST00000291547 GPC1P35052 558 aa11.05□□□□□ -0.64
PKNOX1-201ENST00000291547 FDFT1P37268 417 aa11.05□□□□□ -0.64
PKNOX1-201ENST00000291547 KRT6CP48668 564 aa11.05□□□□□ -0.64
PKNOX1-201ENST00000291547 CCT8P50990 548 aa11.05□□□□□ -0.64
PKNOX1-201ENST00000291547 CBX3Q13185 183 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms