RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 ADGRA3Q8IWK6 1321 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 EME2A4GXA9 379 aaPredicted RBP4.94□□□□□ -1.62
UBR1-201ENST00000290650 KPNA7A9QM74 516 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 THP07101 528 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 SKIP12755 728 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 NQO1P15559 274 aaKnown RBP4.94□□□□□ -1.62
UBR1-201ENST00000290650 TAC1P20366 129 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 PSMB4P28070 264 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 PRKCIP41743 596 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 CPT1AP50416 773 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 NUDT2P50583 147 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 NCKAP1LP55160 1127 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 HIC1Q14526 733 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 TMEM63BQ5T3F8 832 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 CHSY1Q86X52 802 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 MSL3Q8N5Y2 521 aaKnown RBP4.94□□□□□ -1.62
UBR1-201ENST00000290650 ZNF516Q92618 1163 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 FICDQ9BVA6 458 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 SIX2Q9NPC8 291 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 ACKR2O00590 384 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 SH3BGRLO75368 114 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 KCNA2P16389 499 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 ARF4P18085 180 aaPredicted RBP4.94□□□□□ -1.62
UBR1-201ENST00000290650 ATICP31939 592 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 PDAP1Q13442 181 aaKnown RBP4.94□□□□□ -1.62
UBR1-201ENST00000290650 ZRANB3Q5FWF4 1079 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 HYIQ5T013 277 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 TXNRD3NBQ6F5E7 133 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 XRRA1Q6P2D8 792 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 TNS4Q8IZW8 715 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 CLEC4CQ8WTT0 213 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 RPRD1AQ96P16 312 aaPredicted RBP4.94□□□□□ -1.62
UBR1-201ENST00000290650 DPEP3Q9H4B8 488 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 NDE1Q9NXR1 346 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 SLC17A6Q9P2U8 582 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 SUFUQ9UMX1 484 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 PCDHA2Q9Y5H9 948 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 SPATA31C2B4DYI2 1134 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 DNALI1O14645 258 aaPredicted RBP4.94□□□□□ -1.62
UBR1-201ENST00000290650 USP2O75604 605 aaPredicted RBP4.94□□□□□ -1.62
UBR1-201ENST00000290650 TFE3P19532 575 aaPredicted RBP4.94□□□□□ -1.62
UBR1-201ENST00000290650 SERPINB3P29508 390 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 SCNN1GP51170 649 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 SKOR1P84550 965 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 C1QBPQ07021 282 aaKnown RBP4.94□□□□□ -1.62
UBR1-201ENST00000290650 ITGA9Q13797 1035 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 AUHQ13825 339 aaKnown RBP4.94□□□□□ -1.62
UBR1-201ENST00000290650 MFSD10Q14728 455 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 IMPG1Q17R60 797 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 RNF168Q8IYW5 571 aaPredicted RBP4.94□□□□□ -1.62
UBR1-201ENST00000290650 PYROXD2Q8N2H3 581 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 CEP70Q8NHQ1 597 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 SHC3Q92529 594 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 KLRG1Q96E93 195 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 MAGEB18Q96M61 343 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 ROPN1BQ9BZX4 212 aaPredicted RBP4.94□□□□□ -1.62
UBR1-201ENST00000290650 ROPN1Q9HAT0 212 aaPredicted RBP4.94□□□□□ -1.62
UBR1-201ENST00000290650 APOBEC3GQ9HC16 384 aaKnown RBP4.94□□□□□ -1.62
UBR1-201ENST00000290650 CRYL1Q9Y2S2 319 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 TJP1Q07157 1748 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 PHGDHO43175 533 aaKnown RBP4.94□□□□□ -1.62
UBR1-201ENST00000290650 CYP1A2P05177 515 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 ATP6V1B1P15313 513 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 JAM2P57087 298 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 AP2B1P63010 937 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 NOMO3P69849 1222 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 GCNT1Q02742 428 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 SPIRE1Q08AE8 756 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 FNBP1LQ5T0N5 605 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 ITPRIPL1Q6GPH6 555 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 ABHD15Q6UXT9 468 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 C16orf59Q7L2K0 433 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 EXOC3L1Q86VI1 746 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 GPC2Q8N158 579 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 ASIC4Q96FT7 647 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 B3GALT6Q96L58 329 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 EIF2AQ9BY44 585 aaKnown RBP4.94□□□□□ -1.62
UBR1-201ENST00000290650 ABCC6O95255 1503 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 DDX60Q8IY21 1712 aaKnown RBP4.94□□□□□ -1.62
UBR1-201ENST00000290650 A0A0B4J269 797 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 FAM237BA0A1B0GVD1 139 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 RNF103O00237 685 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 TRAPPC3O43617 180 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 PQBP1O60828 265 aaKnown RBP4.93□□□□□ -1.62
UBR1-201ENST00000290650 ZWINTO95229 277 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 PTPN7P35236 360 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 BCAT1P54687 386 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 MAXP61244 160 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 SNRPFP62306 86 aaKnown RBP4.93□□□□□ -1.62
UBR1-201ENST00000290650 DPYSL3Q14195 570 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 CSHL1Q14406 222 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 PDK1Q15118 436 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 RASA2Q15283 850 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 ZNF484Q5JVG2 852 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 EFHC1Q5JVL4 640 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 TMEM154Q6P9G4 183 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 BTNL9Q6UXG8 535 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 CTU1Q7Z7A3 348 aaKnown RBP4.93□□□□□ -1.62
UBR1-201ENST00000290650 HELQQ8TDG4 1101 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 TFAP2BQ92481 460 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms