RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 HLA-DRAP01903 254 aa11.75□□□□□ -0.53
NPC1L1-201ENST00000289547 GTF2H1P32780 548 aa11.75□□□□□ -0.53
NPC1L1-201ENST00000289547 TAP1Q03518 808 aa11.75□□□□□ -0.53
NPC1L1-201ENST00000289547 YWHAHQ04917 246 aaPredicted RBP11.75□□□□□ -0.53
NPC1L1-201ENST00000289547 INPP5AQ14642 412 aa11.75□□□□□ -0.53
NPC1L1-201ENST00000289547 RASA2Q15283 850 aa11.75□□□□□ -0.53
NPC1L1-201ENST00000289547 MAPRE2Q15555 327 aa11.75□□□□□ -0.53
NPC1L1-201ENST00000289547 TMC5Q6UXY8 1006 aa11.75□□□□□ -0.53
NPC1L1-201ENST00000289547 LRRC8DQ7L1W4 858 aa11.75□□□□□ -0.53
NPC1L1-201ENST00000289547 IL31RAQ8NI17 732 aa11.75□□□□□ -0.53
NPC1L1-201ENST00000289547 DCUN1D5Q9BTE7 237 aa11.75□□□□□ -0.53
NPC1L1-201ENST00000289547 BRD8Q9H0E9 1235 aa11.75□□□□□ -0.53
NPC1L1-201ENST00000289547 MYLK2Q9H1R3 596 aa11.75□□□□□ -0.53
NPC1L1-201ENST00000289547 ASB7Q9H672 318 aa11.75□□□□□ -0.53
NPC1L1-201ENST00000289547 DMAP1Q9NPF5 467 aaPredicted RBP11.75□□□□□ -0.53
NPC1L1-201ENST00000289547 AGPAT3Q9NRZ7 376 aa11.75□□□□□ -0.53
NPC1L1-201ENST00000289547 ITGA11Q9UKX5 1188 aa11.75□□□□□ -0.53
NPC1L1-201ENST00000289547 TMA7Q9Y2S6 64 aaKnown RBP11.75□□□□□ -0.53
NPC1L1-201ENST00000289547 CYB561D2O14569 222 aa11.75□□□□□ -0.53
NPC1L1-201ENST00000289547 PDGFRBP09619 1106 aa11.75□□□□□ -0.53
NPC1L1-201ENST00000289547 WEE2P0C1S8 567 aa11.75□□□□□ -0.53
NPC1L1-201ENST00000289547 NUP107P57740 925 aa11.75□□□□□ -0.53
NPC1L1-201ENST00000289547 RAD51Q06609 339 aa11.75□□□□□ -0.53
NPC1L1-201ENST00000289547 ARMC3Q5W041 872 aa11.75□□□□□ -0.53
NPC1L1-201ENST00000289547 TTI2Q6NXR4 508 aa11.75□□□□□ -0.53
NPC1L1-201ENST00000289547 VPS39Q96JC1 886 aa11.75□□□□□ -0.53
NPC1L1-201ENST00000289547 NDNQ99608 321 aa11.75□□□□□ -0.53
NPC1L1-201ENST00000289547 FRMPD4Q14CM0 1322 aa11.75□□□□□ -0.53
NPC1L1-201ENST00000289547 CHEK2O96017 543 aa11.75□□□□□ -0.53
NPC1L1-201ENST00000289547 FMO5P49326 533 aa11.75□□□□□ -0.53
NPC1L1-201ENST00000289547 FNTAP49354 379 aa11.75□□□□□ -0.53
NPC1L1-201ENST00000289547 POU5F1BQ06416 359 aa11.75□□□□□ -0.53
NPC1L1-201ENST00000289547 MYBPC2Q14324 1141 aa11.75□□□□□ -0.53
NPC1L1-201ENST00000289547 WDR49Q8IV35 697 aa11.75□□□□□ -0.53
NPC1L1-201ENST00000289547 ATXN7L3BQ96GX2 97 aa11.75□□□□□ -0.53
NPC1L1-201ENST00000289547 SNTG2Q9NY99 539 aa11.75□□□□□ -0.53
NPC1L1-201ENST00000289547 APEX2Q9UBZ4 518 aa11.75□□□□□ -0.53
NPC1L1-201ENST00000289547 ATMINO43313 823 aaPredicted RBP11.75□□□□□ -0.53
NPC1L1-201ENST00000289547 LGR5O75473 907 aa11.75□□□□□ -0.53
NPC1L1-201ENST00000289547 ATP6V1C1P21283 382 aa11.75□□□□□ -0.53
NPC1L1-201ENST00000289547 SLC1A1P43005 524 aa11.75□□□□□ -0.53
NPC1L1-201ENST00000289547 ACLYP53396 1101 aa11.75□□□□□ -0.53
NPC1L1-201ENST00000289547 SDE2Q6IQ49 451 aa11.75□□□□□ -0.53
NPC1L1-201ENST00000289547 CGRRF1Q99675 332 aa11.75□□□□□ -0.53
NPC1L1-201ENST00000289547 BTBD10Q9BSF8 475 aa11.75□□□□□ -0.53
NPC1L1-201ENST00000289547 CLIC5Q9NZA1 410 aa11.75□□□□□ -0.53
NPC1L1-201ENST00000289547 ANGPTL3Q9Y5C1 460 aa11.75□□□□□ -0.53
NPC1L1-201ENST00000289547 POMCP01189 267 aa11.74□□□□□ -0.53
NPC1L1-201ENST00000289547 DRD4P21917 467 aa11.74□□□□□ -0.53
NPC1L1-201ENST00000289547 ST8SIA6P61647 398 aa11.74□□□□□ -0.53
NPC1L1-201ENST00000289547 CCDC85BQ15834 202 aaPredicted RBP11.74□□□□□ -0.53
NPC1L1-201ENST00000289547 TRIM60Q495X7 471 aa11.74□□□□□ -0.53
NPC1L1-201ENST00000289547 EFHC1Q5JVL4 640 aa11.74□□□□□ -0.53
NPC1L1-201ENST00000289547 ERMARDQ5T6L9 678 aa11.74□□□□□ -0.53
NPC1L1-201ENST00000289547 CWF19L1Q69YN2 538 aaKnown RBP11.74□□□□□ -0.53
NPC1L1-201ENST00000289547 ISLR2Q6UXK2 745 aa11.74□□□□□ -0.53
NPC1L1-201ENST00000289547 IFNEQ86WN2 208 aa11.74□□□□□ -0.53
NPC1L1-201ENST00000289547 ABI2Q9NYB9 513 aaPredicted RBP11.74□□□□□ -0.53
NPC1L1-201ENST00000289547 WDR35Q9P2L0 1181 aa11.74□□□□□ -0.53
NPC1L1-201ENST00000289547 UBR2Q8IWV8 1755 aa11.74□□□□□ -0.53
NPC1L1-201ENST00000289547 KRT7P08729 469 aa11.74□□□□□ -0.53
NPC1L1-201ENST00000289547 CLTBP09497 229 aa11.74□□□□□ -0.53
NPC1L1-201ENST00000289547 ROR1Q01973 937 aa11.74□□□□□ -0.53
NPC1L1-201ENST00000289547 FPGSQ05932 587 aa11.74□□□□□ -0.53
NPC1L1-201ENST00000289547 EFHC2Q5JST6 749 aa11.74□□□□□ -0.53
NPC1L1-201ENST00000289547 CES5AQ6NT32 575 aa11.74□□□□□ -0.53
NPC1L1-201ENST00000289547 ZNF720Q7Z2F6 126 aa11.74□□□□□ -0.53
NPC1L1-201ENST00000289547 CCDC103Q8IW40 242 aa11.74□□□□□ -0.53
NPC1L1-201ENST00000289547 CLEC4DQ8WXI8 215 aa11.74□□□□□ -0.53
NPC1L1-201ENST00000289547 PGM2Q96G03 612 aa11.74□□□□□ -0.53
NPC1L1-201ENST00000289547 TMEM117Q9H0C3 514 aa11.74□□□□□ -0.53
NPC1L1-201ENST00000289547 INTS13Q9NVM9 706 aa11.74□□□□□ -0.53
NPC1L1-201ENST00000289547 PIK3R2O00459 728 aa11.74□□□□□ -0.53
NPC1L1-201ENST00000289547 ENTPD5O75356 428 aa11.74□□□□□ -0.53
NPC1L1-201ENST00000289547 SNRPAP09012 282 aaKnown RBP11.74□□□□□ -0.53
NPC1L1-201ENST00000289547 ITGB5P18084 799 aa11.74□□□□□ -0.53
NPC1L1-201ENST00000289547 S100A5P33763 92 aa11.74□□□□□ -0.53
NPC1L1-201ENST00000289547 TM4SF4P48230 202 aa11.74□□□□□ -0.53
NPC1L1-201ENST00000289547 TOB1P50616 345 aaPredicted RBP11.74□□□□□ -0.53
NPC1L1-201ENST00000289547 TMEM120AQ9BXJ8 343 aa11.74□□□□□ -0.53
NPC1L1-201ENST00000289547 ZC3H7BQ9UGR2 993 aaKnown RBP11.74□□□□□ -0.53
NPC1L1-201ENST00000289547 BLOC1S6Q9UL45 172 aa11.74□□□□□ -0.53
NPC1L1-201ENST00000289547 TPST1O60507 370 aa11.74□□□□□ -0.53
NPC1L1-201ENST00000289547 DLGAP3O95886 979 aa11.74□□□□□ -0.53
NPC1L1-201ENST00000289547 OCM2P0CE71 109 aa11.74□□□□□ -0.53
NPC1L1-201ENST00000289547 OCMP0CE72 109 aaPredicted RBP11.74□□□□□ -0.53
NPC1L1-201ENST00000289547 ETS2P15036 469 aa11.74□□□□□ -0.53
NPC1L1-201ENST00000289547 GEMIN4P57678 1058 aaKnown RBP11.74□□□□□ -0.53
NPC1L1-201ENST00000289547 DEFA1P59665 94 aa11.74□□□□□ -0.53
NPC1L1-201ENST00000289547 DEFA3P59666 94 aa11.74□□□□□ -0.53
NPC1L1-201ENST00000289547 EGFL6Q8IUX8 553 aa11.74□□□□□ -0.53
NPC1L1-201ENST00000289547 MRPL17Q9NRX2 175 aaKnown RBP11.74□□□□□ -0.53
NPC1L1-201ENST00000289547 GALNT8Q9NY28 637 aa11.74□□□□□ -0.53
NPC1L1-201ENST00000289547 KIAA1257Q9ULG3 409 aa11.74□□□□□ -0.53
NPC1L1-201ENST00000289547 NAALADL1Q9UQQ1 740 aa11.74□□□□□ -0.53
NPC1L1-201ENST00000289547 LCP1P13796 627 aa11.73□□□□□ -0.53
NPC1L1-201ENST00000289547 NUDT2P50583 147 aa11.73□□□□□ -0.53
NPC1L1-201ENST00000289547 BCAR1P56945 870 aa11.73□□□□□ -0.53
NPC1L1-201ENST00000289547 XRCC4Q13426 336 aa11.73□□□□□ -0.53
NPC1L1-201ENST00000289547 CCL14Q16627 93 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms