RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 TRDMT1O14717 391 aaKnown RBP26.33■■□□□ 1.81
PDF-201ENST00000288022 ADH1CP00326 375 aa26.33■■□□□ 1.81
PDF-201ENST00000288022 POLR2FP61218 127 aaKnown RBP26.33■■□□□ 1.81
PDF-201ENST00000288022 NAIF1Q69YI7 327 aaPredicted RBP26.33■■□□□ 1.81
PDF-201ENST00000288022 HTR3DQ70Z44 454 aa26.33■■□□□ 1.81
PDF-201ENST00000288022 SCUBE3Q8IX30 993 aa26.33■■□□□ 1.81
PDF-201ENST00000288022 STK32AQ8WU08 396 aa26.33■■□□□ 1.81
PDF-201ENST00000288022 PDCL3Q9H2J4 239 aa26.33■■□□□ 1.81
PDF-201ENST00000288022 CHRDQ9H2X0 955 aa26.33■■□□□ 1.81
PDF-201ENST00000288022 CYTH4Q9UIA0 394 aa26.33■■□□□ 1.81
PDF-201ENST00000288022 PCDHGC3Q9UN70 934 aa26.33■■□□□ 1.81
PDF-201ENST00000288022 SLC12A8A0AV02 714 aa26.32■■□□□ 1.8
PDF-201ENST00000288022 F8VZ95 297 aa26.32■■□□□ 1.8
PDF-201ENST00000288022 LAMTOR5O43504 91 aa26.32■■□□□ 1.8
PDF-201ENST00000288022 STC2O76061 302 aa26.32■■□□□ 1.8
PDF-201ENST00000288022 GALK1P51570 392 aa26.32■■□□□ 1.8
PDF-201ENST00000288022 TMEM196Q5HYL7 178 aa26.32■■□□□ 1.8
PDF-201ENST00000288022 RHBDF2Q6PJF5 856 aa26.32■■□□□ 1.8
PDF-201ENST00000288022 NEK11Q8NG66 645 aa26.32■■□□□ 1.8
PDF-201ENST00000288022 ATOH1Q92858 354 aaPredicted RBP26.32■■□□□ 1.8
PDF-201ENST00000288022 CD101Q93033 1021 aa26.32■■□□□ 1.8
PDF-201ENST00000288022 SLC4A5Q9BY07 1137 aa26.32■■□□□ 1.8
PDF-201ENST00000288022 NLRC4Q9NPP4 1024 aa26.32■■□□□ 1.8
PDF-201ENST00000288022 SIK3Q9Y2K2 1263 aa26.32■■□□□ 1.8
PDF-201ENST00000288022 CEP83Q9Y592 693 aa26.32■■□□□ 1.8
PDF-201ENST00000288022 E5RJQ4 531 aa26.31■■□□□ 1.8
PDF-201ENST00000288022 LTFP02788 710 aa26.31■■□□□ 1.8
PDF-201ENST00000288022 ADH5P11766 374 aa26.31■■□□□ 1.8
PDF-201ENST00000288022 NHLH1Q02575 133 aa26.31■■□□□ 1.8
PDF-201ENST00000288022 MTAPQ13126 283 aa26.31■■□□□ 1.8
PDF-201ENST00000288022 PDCLQ13371 301 aa26.31■■□□□ 1.8
PDF-201ENST00000288022 ZSCAN23Q3MJ62 389 aa26.31■■□□□ 1.8
PDF-201ENST00000288022 LY6G5CQ5SRR4 150 aa26.31■■□□□ 1.8
PDF-201ENST00000288022 FSTL4Q6MZW2 842 aa26.31■■□□□ 1.8
PDF-201ENST00000288022 APTXQ7Z2E3 356 aaKnown RBP26.31■■□□□ 1.8
PDF-201ENST00000288022 FAM149B1Q96BN6 582 aa26.31■■□□□ 1.8
PDF-201ENST00000288022 FAM122AQ96E09 287 aa26.31■■□□□ 1.8
PDF-201ENST00000288022 EPHB6O15197 1021 aa26.3■■□□□ 1.8
PDF-201ENST00000288022 SART1O43290 800 aaKnown RBP26.3■■□□□ 1.8
PDF-201ENST00000288022 GREM1O60565 184 aa26.3■■□□□ 1.8
PDF-201ENST00000288022 CYP11B1P15538 503 aa26.3■■□□□ 1.8
PDF-201ENST00000288022 RPL34P49207 117 aaKnown RBP26.3■■□□□ 1.8
PDF-201ENST00000288022 CCINQ13939 588 aa26.3■■□□□ 1.8
PDF-201ENST00000288022 IQCB1Q15051 598 aa26.3■■□□□ 1.8
PDF-201ENST00000288022 ANO4Q32M45 955 aa26.3■■□□□ 1.8
PDF-201ENST00000288022 FMNL3Q8IVF7 1028 aa26.3■■□□□ 1.8
PDF-201ENST00000288022 C1orf131Q8NDD1 294 aaKnown RBP26.3■■□□□ 1.8
PDF-201ENST00000288022 NOX5Q96PH1 765 aa26.3■■□□□ 1.8
PDF-201ENST00000288022 SPAG5Q96R06 1193 aa26.3■■□□□ 1.8
PDF-201ENST00000288022 LHX5Q9H2C1 402 aa26.3■■□□□ 1.8
PDF-201ENST00000288022 FBRSL1Q9HCM7 1045 aaKnown RBP26.3■■□□□ 1.8
PDF-201ENST00000288022 SPHK2Q9NRA0 654 aa26.3■■□□□ 1.8
PDF-201ENST00000288022 SFMBT1Q9UHJ3 866 aa26.3■■□□□ 1.8
PDF-201ENST00000288022 DAAM1Q9Y4D1 1078 aa26.3■■□□□ 1.8
PDF-201ENST00000288022 F5P12259 2224 aa26.3■■□□□ 1.8
PDF-201ENST00000288022 EGFP01133 1207 aa26.29■■□□□ 1.8
PDF-201ENST00000288022 DRD1P21728 446 aa26.29■■□□□ 1.8
PDF-201ENST00000288022 CORO1AP31146 461 aaKnown RBP26.29■■□□□ 1.8
PDF-201ENST00000288022 TPM4P67936 248 aa26.29■■□□□ 1.8
PDF-201ENST00000288022 GAD2Q05329 585 aa26.29■■□□□ 1.8
PDF-201ENST00000288022 TAF3Q5VWG9 929 aa26.29■■□□□ 1.8
PDF-201ENST00000288022 Q6ZS52 159 aa26.29■■□□□ 1.8
PDF-201ENST00000288022 TMEM110Q86TL2 294 aa26.29■■□□□ 1.8
PDF-201ENST00000288022 WDTC1Q8N5D0 677 aa26.29■■□□□ 1.8
PDF-201ENST00000288022 ERGIC2Q96RQ1 377 aa26.29■■□□□ 1.8
PDF-201ENST00000288022 IER2Q9BTL4 223 aa26.29■■□□□ 1.8
PDF-201ENST00000288022 DCLK3Q9C098 648 aa26.29■■□□□ 1.8
PDF-201ENST00000288022 CBX8Q9HC52 389 aa26.29■■□□□ 1.8
PDF-201ENST00000288022 FAM86C1Q9NVL1 165 aa26.29■■□□□ 1.8
PDF-201ENST00000288022 GFPT2O94808 682 aa26.28■■□□□ 1.8
PDF-201ENST00000288022 OPRD1P41143 372 aa26.28■■□□□ 1.8
PDF-201ENST00000288022 GAB4Q2WGN9 574 aa26.28■■□□□ 1.8
PDF-201ENST00000288022 FILIP1LQ4L180 1135 aa26.28■■□□□ 1.8
PDF-201ENST00000288022 SYNPOQ8N3V7 929 aa26.28■■□□□ 1.8
PDF-201ENST00000288022 PLD4Q96BZ4 506 aa26.28■■□□□ 1.8
PDF-201ENST00000288022 PPP1R13BQ96KQ4 1090 aa26.28■■□□□ 1.8
PDF-201ENST00000288022 CPXM1Q96SM3 734 aa26.28■■□□□ 1.8
PDF-201ENST00000288022 ZNF510Q9Y2H8 683 aa26.28■■□□□ 1.8
PDF-201ENST00000288022 PAPSS1O43252 624 aaPredicted RBP26.27■■□□□ 1.8
PDF-201ENST00000288022 NCAM1P13591 858 aa26.27■■□□□ 1.8
PDF-201ENST00000288022 Q6ZNB5 142 aa26.27■■□□□ 1.8
PDF-201ENST00000288022 TPGS1Q6ZTW0 290 aa26.27■■□□□ 1.8
PDF-201ENST00000288022 LUZP1Q86V48 1076 aa26.27■■□□□ 1.8
PDF-201ENST00000288022 TMEM25Q86YD3 366 aa26.27■■□□□ 1.8
PDF-201ENST00000288022 DENND1CQ8IV53 801 aa26.27■■□□□ 1.8
PDF-201ENST00000288022 SYNCQ9H7C4 482 aa26.27■■□□□ 1.8
PDF-201ENST00000288022 TJP2Q9UDY2 1190 aa26.27■■□□□ 1.8
PDF-201ENST00000288022 HBS1LQ9Y450 684 aaKnown RBP26.27■■□□□ 1.8
PDF-201ENST00000288022 CAPN9O14815 690 aa26.26■■□□□ 1.79
PDF-201ENST00000288022 MSI1O43347 362 aaKnown RBP26.26■■□□□ 1.79
PDF-201ENST00000288022 KLKB1P03952 638 aa26.26■■□□□ 1.79
PDF-201ENST00000288022 SOX5P35711 763 aa26.26■■□□□ 1.79
PDF-201ENST00000288022 PLA2G5P39877 138 aa26.26■■□□□ 1.79
PDF-201ENST00000288022 STAT1P42224 750 aa26.26■■□□□ 1.79
PDF-201ENST00000288022 SLC6A11P48066 632 aa26.26■■□□□ 1.79
PDF-201ENST00000288022 JAM2P57087 298 aa26.26■■□□□ 1.79
PDF-201ENST00000288022 SNX16P57768 344 aa26.26■■□□□ 1.79
PDF-201ENST00000288022 CSTF1Q05048 431 aaKnown RBP26.26■■□□□ 1.79
PDF-201ENST00000288022 MSANTD2Q6P1R3 559 aa26.26■■□□□ 1.79
PDF-201ENST00000288022 NOP9Q86U38 636 aaKnown RBP26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms