RNA–Protein interactions for RNA: ENST00000287546.8

VPS8-201, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS8, Length 5,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-201ENST00000287546 APOC2P02655 101 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 ODC1P11926 461 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 DARSP14868 501 aaKnown RBP7.17□□□□□ -1.26
VPS8-201ENST00000287546 MARCKSL1P49006 195 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 SULT1E1P49888 294 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 ZNF143P52747 638 aaPredicted RBP7.17□□□□□ -1.26
VPS8-201ENST00000287546 GUCY1A3Q02108 690 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 GRB14Q14449 540 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 DENND1BQ6P3S1 775 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 MFSD7Q6UXD7 560 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 SRRM1Q8IYB3 904 aaKnown RBP7.17□□□□□ -1.26
VPS8-201ENST00000287546 OR2W6PQ8NHA6 318 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 DNAJB3Q8WWF6 145 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 CCDC124Q96CT7 223 aaKnown RBP7.17□□□□□ -1.26
VPS8-201ENST00000287546 SPATA16Q9BXB7 569 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 SMYD3Q9H7B4 428 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 PALMDQ9NP74 551 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 CYLDQ9NQC7 956 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 TBK1Q9UHD2 729 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 CARNS1A5YM72 827 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 TTLL13PA6NNM8 815 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 KPNA7A9QM74 516 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 CASQ2O14958 399 aaPredicted RBP7.17□□□□□ -1.26
VPS8-201ENST00000287546 THP07101 528 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 PEX5P50542 639 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 KPNA2P52292 529 aaKnown RBP7.17□□□□□ -1.26
VPS8-201ENST00000287546 OTUD4Q01804 1114 aaKnown RBP7.17□□□□□ -1.26
VPS8-201ENST00000287546 SLC6A3Q01959 620 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 IFT88Q13099 833 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 PDK1Q15118 436 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 ZBTB41Q5SVQ8 909 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 CHADLQ6NUI6 762 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 RGMBQ6NW40 437 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 LCLAT1Q6UWP7 414 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 MAMDC4Q6UXC1 1216 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 CCT8L2Q96SF2 557 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 VCX3AQ9NNX9 186 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 SLC24A2Q9UI40 661 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 NENFQ9UMX5 172 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 A0A1B0GUA9 196 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 TSPAN1O60635 241 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 STAU1O95793 577 aaKnown RBP7.17□□□□□ -1.26
VPS8-201ENST00000287546 CST3P01034 146 aaPredicted RBP7.17□□□□□ -1.26
VPS8-201ENST00000287546 ITGAVP06756 1048 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 PDGFRBP09619 1106 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 SAT1P21673 171 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 CDH8P55286 799 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 ARHGEF7Q14155 803 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 KYNUQ16719 465 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 SMTNL2Q2TAL5 461 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 BBS12Q6ZW61 710 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 RRM2BQ7LG56 351 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 KDELC2Q7Z4H8 507 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 HDDC3Q8N4P3 179 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 CAMKK1Q8N5S9 505 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 NIPA2Q8N8Q9 360 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 C1orf127Q8N9H9 656 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 ACTL9Q8TC94 416 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 BRI3BPQ8WY22 251 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 NUDCD1Q96RS6 583 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 SYT11Q9BT88 431 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 BCAP29Q9UHQ4 241 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 KLF15Q9UIH9 416 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 MID2Q9UJV3 735 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 CNTN6Q9UQ52 1028 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 GPR25O00155 361 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 KCNN4O15554 427 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 PSMD3O43242 534 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 CIB2O75838 187 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 CABYRO75952 493 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 TSHRP16473 764 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 ACO1P21399 889 aaKnown RBP7.17□□□□□ -1.26
VPS8-201ENST00000287546 HTRA3P83110 453 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 DRICH1Q6PGQ1 229 aaPredicted RBP7.17□□□□□ -1.26
VPS8-201ENST00000287546 CRELD2Q6UXH1 353 aaPredicted RBP7.17□□□□□ -1.26
VPS8-201ENST00000287546 ZC3H18Q86VM9 953 aaKnown RBP7.17□□□□□ -1.26
VPS8-201ENST00000287546 ARHGAP24Q8N264 748 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 TMEM199Q8N511 208 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 ZCCHC9Q8N567 271 aaKnown RBP7.17□□□□□ -1.26
VPS8-201ENST00000287546 FAM172AQ8WUF8 416 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 DDX1Q92499 740 aaKnown RBP7.17□□□□□ -1.26
VPS8-201ENST00000287546 TSSK1BQ9BXA7 367 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 PHACTR1Q9C0D0 580 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 XAB2Q9HCS7 855 aaKnown RBP7.17□□□□□ -1.26
VPS8-201ENST00000287546 SAE1Q9UBE0 346 aaPredicted RBP7.17□□□□□ -1.26
VPS8-201ENST00000287546 GMEB2Q9UKD1 530 aa7.17□□□□□ -1.26
VPS8-201ENST00000287546 SBF1O95248 1867 aa7.16□□□□□ -1.26
VPS8-201ENST00000287546 CYB561D2O14569 222 aa7.16□□□□□ -1.26
VPS8-201ENST00000287546 XYLBO75191 536 aa7.16□□□□□ -1.26
VPS8-201ENST00000287546 ABHD2P08910 425 aa7.16□□□□□ -1.26
VPS8-201ENST00000287546 VCLP18206 1134 aa7.16□□□□□ -1.26
VPS8-201ENST00000287546 CYP3A5P20815 502 aa7.16□□□□□ -1.26
VPS8-201ENST00000287546 FDFT1P37268 417 aa7.16□□□□□ -1.26
VPS8-201ENST00000287546 ANKRD20A3Q5VUR7 823 aa7.16□□□□□ -1.26
VPS8-201ENST00000287546 CCNJLQ8IV13 435 aa7.16□□□□□ -1.26
VPS8-201ENST00000287546 ZNF473Q8WTR7 871 aaKnown RBP7.16□□□□□ -1.26
VPS8-201ENST00000287546 STK32AQ8WU08 396 aa7.16□□□□□ -1.26
VPS8-201ENST00000287546 APBB2Q92870 758 aa7.16□□□□□ -1.26
VPS8-201ENST00000287546 C9orf72Q96LT7 481 aa7.16□□□□□ -1.26
VPS8-201ENST00000287546 ZNF512Q96ME7 567 aaPredicted RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms