RNA–Protein interactions for RNA: ENST00000285176.13

CCDC144B-201, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

BASIC

Gene CCDC144B, Length 4,310 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-201ENST00000285176 IRX4P78413 519 aa9.38□□□□□ -0.91
CCDC144B-201ENST00000285176 IZUMO3Q5VZ72 239 aa9.38□□□□□ -0.91
CCDC144B-201ENST00000285176 DCP1BQ8IZD4 617 aaKnown RBP9.38□□□□□ -0.91
CCDC144B-201ENST00000285176 PYROXD1Q8WU10 500 aa9.38□□□□□ -0.91
CCDC144B-201ENST00000285176 RSPH1Q8WYR4 309 aa9.38□□□□□ -0.91
CCDC144B-201ENST00000285176 SMARCD1Q96GM5 515 aa9.38□□□□□ -0.91
CCDC144B-201ENST00000285176 CNPY3Q9BT09 278 aa9.38□□□□□ -0.91
CCDC144B-201ENST00000285176 WDR35Q9P2L0 1181 aa9.38□□□□□ -0.91
CCDC144B-201ENST00000285176 SCN1AP35498 2009 aa9.38□□□□□ -0.91
CCDC144B-201ENST00000285176 WDR91A4D1P6 747 aa9.38□□□□□ -0.91
CCDC144B-201ENST00000285176 EEF2KO00418 725 aaKnown RBP9.38□□□□□ -0.91
CCDC144B-201ENST00000285176 DNM1LO00429 736 aa9.38□□□□□ -0.91
CCDC144B-201ENST00000285176 MEFVO15553 781 aaPredicted RBP9.38□□□□□ -0.91
CCDC144B-201ENST00000285176 FAM189A1O60320 539 aa9.38□□□□□ -0.91
CCDC144B-201ENST00000285176 GOT1P17174 413 aa9.38□□□□□ -0.91
CCDC144B-201ENST00000285176 MSH2P43246 934 aa9.38□□□□□ -0.91
CCDC144B-201ENST00000285176 SLC11A1P49279 550 aa9.38□□□□□ -0.91
CCDC144B-201ENST00000285176 ADCY2Q08462 1091 aa9.38□□□□□ -0.91
CCDC144B-201ENST00000285176 CLLU1OSQ5K130 101 aa9.38□□□□□ -0.91
CCDC144B-201ENST00000285176 FUT10Q6P4F1 479 aa9.38□□□□□ -0.91
CCDC144B-201ENST00000285176 REM2Q8IYK8 340 aaPredicted RBP9.38□□□□□ -0.91
CCDC144B-201ENST00000285176 ZBED8Q8IZ13 594 aa9.38□□□□□ -0.91
CCDC144B-201ENST00000285176 DDX27Q96GQ7 796 aaKnown RBP9.38□□□□□ -0.91
CCDC144B-201ENST00000285176 TKTL2Q9H0I9 626 aa9.38□□□□□ -0.91
CCDC144B-201ENST00000285176 C11orf49Q9H6J7 331 aa9.38□□□□□ -0.91
CCDC144B-201ENST00000285176 DMAP1Q9NPF5 467 aaPredicted RBP9.38□□□□□ -0.91
CCDC144B-201ENST00000285176 CRTAC1Q9NQ79 661 aa9.38□□□□□ -0.91
CCDC144B-201ENST00000285176 CHST12Q9NRB3 414 aa9.38□□□□□ -0.91
CCDC144B-201ENST00000285176 MPP6Q9NZW5 540 aa9.38□□□□□ -0.91
CCDC144B-201ENST00000285176 CNTN3Q9P232 1028 aa9.38□□□□□ -0.91
CCDC144B-201ENST00000285176 TSR3Q9UJK0 312 aaKnown RBP9.38□□□□□ -0.91
CCDC144B-201ENST00000285176 ATP8B3O60423 1300 aa9.38□□□□□ -0.91
CCDC144B-201ENST00000285176 ATP9BO43861 1147 aa9.38□□□□□ -0.91
CCDC144B-201ENST00000285176 KLRC2P26717 231 aa9.38□□□□□ -0.91
CCDC144B-201ENST00000285176 IL1R2P27930 398 aa9.38□□□□□ -0.91
CCDC144B-201ENST00000285176 CTNNB1P35222 781 aa9.38□□□□□ -0.91
CCDC144B-201ENST00000285176 CACNA2D1P54289 1103 aa9.38□□□□□ -0.91
CCDC144B-201ENST00000285176 IRF5Q13568 498 aa9.38□□□□□ -0.91
CCDC144B-201ENST00000285176 SEPT6Q14141 434 aa9.38□□□□□ -0.91
CCDC144B-201ENST00000285176 CA9Q16790 459 aa9.38□□□□□ -0.91
CCDC144B-201ENST00000285176 HEATR6Q6AI08 1181 aaKnown RBP9.38□□□□□ -0.91
CCDC144B-201ENST00000285176 SLC39A5Q6ZMH5 540 aa9.38□□□□□ -0.91
CCDC144B-201ENST00000285176 SPOCD1Q6ZMY3 1216 aa9.38□□□□□ -0.91
CCDC144B-201ENST00000285176 GPRIN1Q7Z2K8 1008 aa9.38□□□□□ -0.91
CCDC144B-201ENST00000285176 CHSY1Q86X52 802 aa9.38□□□□□ -0.91
CCDC144B-201ENST00000285176 LRRC57Q8N9N7 239 aa9.38□□□□□ -0.91
CCDC144B-201ENST00000285176 BADQ92934 168 aa9.38□□□□□ -0.91
CCDC144B-201ENST00000285176 RPRD1AQ96P16 312 aaPredicted RBP9.38□□□□□ -0.91
CCDC144B-201ENST00000285176 SNRNP25Q9BV90 132 aaKnown RBP9.38□□□□□ -0.91
CCDC144B-201ENST00000285176 NFKBIZQ9BYH8 718 aa9.38□□□□□ -0.91
CCDC144B-201ENST00000285176 MAF1Q9H063 256 aa9.38□□□□□ -0.91
CCDC144B-201ENST00000285176 NRDE2Q9H7Z3 1164 aa9.38□□□□□ -0.91
CCDC144B-201ENST00000285176 INTUQ9ULD6 942 aa9.38□□□□□ -0.91
CCDC144B-201ENST00000285176 APOL1O14791 398 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 CRCPO75575 148 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 CPP00450 1065 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 LTFP02788 710 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 CYP3A5P20815 502 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 CA4P22748 312 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 IL9RQ01113 521 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 POU5F1BQ06416 359 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 DMTNQ08495 405 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 SPARCL1Q14515 664 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 KYNUQ16719 465 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 EFHC1Q5JVL4 640 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 DCAF12L1Q5VU92 463 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 RTN4RL1Q86UN2 441 aaPredicted RBP9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 CFAP52Q8N1V2 620 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 OR10T2Q8NGX3 314 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 GDAP1Q8TB36 358 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 CDKL2Q92772 493 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 SLITRK1Q96PX8 696 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 PTPRFP10586 1907 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 GRXCR1A8MXD5 290 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 GIPC1O14908 333 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 LSM8O95777 96 aaKnown RBP9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 CYP1A2P05177 515 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 SLC1A1P43005 524 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 EIF3BP55884 814 aaKnown RBP9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 TFDP3Q5H9I0 405 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 SLFN11Q7Z7L1 901 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 TTC39CQ8N584 583 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 KLHDC9Q8NEP7 349 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 HHIPL1Q96JK4 782 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 TMLHEQ9NVH6 421 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 KANSL3Q9P2N6 904 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 SF3B1O75533 1304 aaKnown RBP eCLIP9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 ARHGEF37A1IGU5 675 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 TMEM191CA6NGB0 347 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 COILP38432 576 aaPredicted RBP9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 SLC5A3P53794 718 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 VCPP55072 806 aaKnown RBP9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 VEPH1Q14D04 833 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 STILQ15468 1287 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 PSMD5Q16401 504 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 DCLRE1AQ6PJP8 1040 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 LCLAT1Q6UWP7 414 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 CLEC20AQ6ZU45 233 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 DENND5BQ6ZUT9 1274 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 CIR1Q86X95 450 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms