RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 SPATA18Q8TC71 538 aa11.43□□□□□ -0.58
GGPS1-201ENST00000282841 KCTD15Q96SI1 283 aaPredicted RBP11.43□□□□□ -0.58
GGPS1-201ENST00000282841 FMO2Q99518 471 aa11.43□□□□□ -0.58
GGPS1-201ENST00000282841 DDX23Q9BUQ8 820 aaKnown RBP11.43□□□□□ -0.58
GGPS1-201ENST00000282841 CXorf56Q9H5V9 222 aa11.43□□□□□ -0.58
GGPS1-201ENST00000282841 AP4E1Q9UPM8 1137 aa11.43□□□□□ -0.58
GGPS1-201ENST00000282841 GOLGA6BA6NDN3 693 aa11.43□□□□□ -0.58
GGPS1-201ENST00000282841 HSF2BPO75031 334 aa11.43□□□□□ -0.58
GGPS1-201ENST00000282841 BANF1O75531 89 aa11.43□□□□□ -0.58
GGPS1-201ENST00000282841 CPB1P15086 417 aa11.43□□□□□ -0.58
GGPS1-201ENST00000282841 DNAJB2P25686 324 aa11.43□□□□□ -0.58
GGPS1-201ENST00000282841 PCK1P35558 622 aa11.43□□□□□ -0.58
GGPS1-201ENST00000282841 HSD17B3P37058 310 aa11.43□□□□□ -0.58
GGPS1-201ENST00000282841 ACADSBP45954 432 aa11.43□□□□□ -0.58
GGPS1-201ENST00000282841 ARSEP51690 589 aa11.43□□□□□ -0.58
GGPS1-201ENST00000282841 ITGA8P53708 1063 aa11.43□□□□□ -0.58
GGPS1-201ENST00000282841 SLC5A3P53794 718 aa11.43□□□□□ -0.58
GGPS1-201ENST00000282841 GBE1Q04446 702 aa11.43□□□□□ -0.58
GGPS1-201ENST00000282841 CCNG2Q16589 344 aa11.43□□□□□ -0.58
GGPS1-201ENST00000282841 P3H1Q32P28 736 aa11.43□□□□□ -0.58
GGPS1-201ENST00000282841 EFHC1Q5JVL4 640 aa11.43□□□□□ -0.58
GGPS1-201ENST00000282841 ZNF365Q70YC5 407 aa11.43□□□□□ -0.58
GGPS1-201ENST00000282841 BHLHA9Q7RTU4 235 aa11.43□□□□□ -0.58
GGPS1-201ENST00000282841 POLNQ7Z5Q5 900 aa11.43□□□□□ -0.58
GGPS1-201ENST00000282841 NPAS4Q8IUM7 802 aa11.43□□□□□ -0.58
GGPS1-201ENST00000282841 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.43□□□□□ -0.58
GGPS1-201ENST00000282841 SEPT5Q99719 369 aaPredicted RBP11.43□□□□□ -0.58
GGPS1-201ENST00000282841 CEP41Q9BYV8 373 aa11.43□□□□□ -0.58
GGPS1-201ENST00000282841 FAM124BQ9H5Z6 455 aaPredicted RBP11.43□□□□□ -0.58
GGPS1-201ENST00000282841 DDIT4Q9NX09 232 aa11.43□□□□□ -0.58
GGPS1-201ENST00000282841 RASAL2Q9UJF2 1139 aa11.43□□□□□ -0.58
GGPS1-201ENST00000282841 TBX21Q9UL17 535 aa11.43□□□□□ -0.58
GGPS1-201ENST00000282841 PCDHB8Q9UN66 801 aa11.43□□□□□ -0.58
GGPS1-201ENST00000282841 CCDC189A1A4V9 331 aa11.42□□□□□ -0.58
GGPS1-201ENST00000282841 MDM4O15151 490 aa11.42□□□□□ -0.58
GGPS1-201ENST00000282841 SYF2O95926 243 aaKnown RBP11.42□□□□□ -0.58
GGPS1-201ENST00000282841 TBX18O95935 607 aa11.42□□□□□ -0.58
GGPS1-201ENST00000282841 TUBBP07437 444 aa11.42□□□□□ -0.58
GGPS1-201ENST00000282841 COL6A1P12109 1028 aa11.42□□□□□ -0.58
GGPS1-201ENST00000282841 L1CAMP32004 1257 aa11.42□□□□□ -0.58
GGPS1-201ENST00000282841 FNTAP49354 379 aa11.42□□□□□ -0.58
GGPS1-201ENST00000282841 DEUP1Q05D60 604 aa11.42□□□□□ -0.58
GGPS1-201ENST00000282841 GPS1Q13098 491 aa11.42□□□□□ -0.58
GGPS1-201ENST00000282841 ERMARDQ5T6L9 678 aa11.42□□□□□ -0.58
GGPS1-201ENST00000282841 BSPRYQ5W0U4 402 aa11.42□□□□□ -0.58
GGPS1-201ENST00000282841 FUT10Q6P4F1 479 aa11.42□□□□□ -0.58
GGPS1-201ENST00000282841 EMBQ6PCB8 327 aa11.42□□□□□ -0.58
GGPS1-201ENST00000282841 CAPN12Q6ZSI9 719 aa11.42□□□□□ -0.58
GGPS1-201ENST00000282841 CRIPAKQ8N1N5 446 aa11.42□□□□□ -0.58
GGPS1-201ENST00000282841 PQLC3Q8N755 202 aa11.42□□□□□ -0.58
GGPS1-201ENST00000282841 GIPC2Q8TF65 315 aa11.42□□□□□ -0.58
GGPS1-201ENST00000282841 ARL8AQ96BM9 186 aa11.42□□□□□ -0.58
GGPS1-201ENST00000282841 UROC1Q96N76 676 aa11.42□□□□□ -0.58
GGPS1-201ENST00000282841 SEMA4AQ9H3S1 761 aa11.42□□□□□ -0.58
GGPS1-201ENST00000282841 NMUR1Q9HB89 426 aa11.42□□□□□ -0.58
GGPS1-201ENST00000282841 POPDC2Q9HBU9 364 aa11.42□□□□□ -0.58
GGPS1-201ENST00000282841 DMAP1Q9NPF5 467 aaPredicted RBP11.42□□□□□ -0.58
GGPS1-201ENST00000282841 MTMR10Q9NXD2 777 aa11.42□□□□□ -0.58
GGPS1-201ENST00000282841 FAM53CQ9NYF3 392 aa11.42□□□□□ -0.58
GGPS1-201ENST00000282841 PIAS1O75925 651 aa11.42□□□□□ -0.58
GGPS1-201ENST00000282841 LTFP02788 710 aa11.42□□□□□ -0.58
GGPS1-201ENST00000282841 CLTBP09497 229 aa11.42□□□□□ -0.58
GGPS1-201ENST00000282841 EN2P19622 333 aaPredicted RBP11.42□□□□□ -0.58
GGPS1-201ENST00000282841 IVDP26440 423 aa11.42□□□□□ -0.58
GGPS1-201ENST00000282841 RPL34P49207 117 aaKnown RBP11.42□□□□□ -0.58
GGPS1-201ENST00000282841 HNRNPH2P55795 449 aaKnown RBP11.42□□□□□ -0.58
GGPS1-201ENST00000282841 EIF3EP60228 445 aaKnown RBP11.42□□□□□ -0.58
GGPS1-201ENST00000282841 CUL1Q13616 776 aa11.42□□□□□ -0.58
GGPS1-201ENST00000282841 ZKSCAN8Q15776 578 aaPredicted RBP11.42□□□□□ -0.58
GGPS1-201ENST00000282841 SLC25A52Q3SY17 297 aa11.42□□□□□ -0.58
GGPS1-201ENST00000282841 ANKRD20A8PQ5CZ79 823 aa11.42□□□□□ -0.58
GGPS1-201ENST00000282841 FAXCQ5TGI0 409 aa11.42□□□□□ -0.58
GGPS1-201ENST00000282841 FBXO46Q6PJ61 603 aaPredicted RBP11.42□□□□□ -0.58
GGPS1-201ENST00000282841 RNF19BQ6ZMZ0 732 aa11.42□□□□□ -0.58
GGPS1-201ENST00000282841 SH2D3CQ8N5H7 860 aa11.42□□□□□ -0.58
GGPS1-201ENST00000282841 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.42□□□□□ -0.58
GGPS1-201ENST00000282841 C12orf50Q8NA57 414 aaPredicted RBP11.42□□□□□ -0.58
GGPS1-201ENST00000282841 C11orf84Q9BUA3 381 aaPredicted RBP11.42□□□□□ -0.58
GGPS1-201ENST00000282841 OSER1Q9NX31 292 aa11.42□□□□□ -0.58
GGPS1-201ENST00000282841 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.42□□□□□ -0.58
GGPS1-201ENST00000282841 CWC15Q9P013 229 aaKnown RBP11.42□□□□□ -0.58
GGPS1-201ENST00000282841 VPS18Q9P253 973 aa11.42□□□□□ -0.58
GGPS1-201ENST00000282841 KANSL3Q9P2N6 904 aa11.42□□□□□ -0.58
GGPS1-201ENST00000282841 FAM187AA6NFU0 413 aa11.42□□□□□ -0.58
GGPS1-201ENST00000282841 KIF1CO43896 1103 aaKnown RBP11.42□□□□□ -0.58
GGPS1-201ENST00000282841 SHBGP04278 402 aa11.42□□□□□ -0.58
GGPS1-201ENST00000282841 RBP3P10745 1247 aa11.42□□□□□ -0.58
GGPS1-201ENST00000282841 CA8P35219 290 aa11.42□□□□□ -0.58
GGPS1-201ENST00000282841 GJA8P48165 433 aa11.42□□□□□ -0.58
GGPS1-201ENST00000282841 SLC10A2Q12908 348 aaPredicted RBP11.42□□□□□ -0.58
GGPS1-201ENST00000282841 DUSP4Q13115 394 aa11.42□□□□□ -0.58
GGPS1-201ENST00000282841 IKBKEQ14164 716 aa11.42□□□□□ -0.58
GGPS1-201ENST00000282841 MGAT5BQ3V5L5 792 aa11.42□□□□□ -0.58
GGPS1-201ENST00000282841 TMC3Q7Z5M5 1100 aa11.42□□□□□ -0.58
GGPS1-201ENST00000282841 PLD5Q8N7P1 536 aa11.42□□□□□ -0.58
GGPS1-201ENST00000282841 RNF157Q96PX1 679 aa11.42□□□□□ -0.58
GGPS1-201ENST00000282841 VN1R3Q9BXE9 311 aa11.42□□□□□ -0.58
GGPS1-201ENST00000282841 SIK2Q9H0K1 926 aa11.42□□□□□ -0.58
GGPS1-201ENST00000282841 FAM204AQ9H8W3 233 aa11.42□□□□□ -0.58
GGPS1-201ENST00000282841 FAM114A2Q9NRY5 505 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms