RNA–Protein interactions for RNA: ENST00000278544.9

ACER3-201, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 3,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-201ENST00000278544 AP4E1Q9UPM8 1137 aa13.87□□□□□ -0.19
ACER3-201ENST00000278544 GOLGA6L10A0A0M3HER8 536 aa13.86□□□□□ -0.19
ACER3-201ENST00000278544 I6L893 689 aaPredicted RBP13.86□□□□□ -0.19
ACER3-201ENST00000278544 RFXAPO00287 272 aa13.86□□□□□ -0.19
ACER3-201ENST00000278544 ATF6P18850 670 aa13.86□□□□□ -0.19
ACER3-201ENST00000278544 AMPD1P23109 780 aa13.86□□□□□ -0.19
ACER3-201ENST00000278544 IRS1P35568 1242 aa13.86□□□□□ -0.19
ACER3-201ENST00000278544 YWHAGP61981 247 aaKnown RBP eCLIP13.86□□□□□ -0.19
ACER3-201ENST00000278544 PPP1R2P3Q6NXS1 205 aa13.86□□□□□ -0.19
ACER3-201ENST00000278544 TAC4Q86UU9 113 aa13.86□□□□□ -0.19
ACER3-201ENST00000278544 STK32AQ8WU08 396 aa13.86□□□□□ -0.19
ACER3-201ENST00000278544 APOL5Q9BWW9 433 aa13.86□□□□□ -0.19
ACER3-201ENST00000278544 CCSER2Q9H7U1 834 aa13.86□□□□□ -0.19
ACER3-201ENST00000278544 ETNK2Q9NVF9 386 aa13.86□□□□□ -0.19
ACER3-201ENST00000278544 DNPEPQ9ULA0 475 aa13.86□□□□□ -0.19
ACER3-201ENST00000278544 NFU1Q9UMS0 254 aa13.86□□□□□ -0.19
ACER3-201ENST00000278544 ZNF148Q9UQR1 794 aa13.86□□□□□ -0.19
ACER3-201ENST00000278544 INSL6Q9Y581 213 aa13.86□□□□□ -0.19
ACER3-201ENST00000278544 DAPK3O43293 454 aa13.86□□□□□ -0.19
ACER3-201ENST00000278544 SOD2P04179 222 aa13.86□□□□□ -0.19
ACER3-201ENST00000278544 CNPP09543 421 aaKnown RBP13.86□□□□□ -0.19
ACER3-201ENST00000278544 PECAM1P16284 738 aaPredicted RBP13.86□□□□□ -0.19
ACER3-201ENST00000278544 ELF1P32519 619 aa13.86□□□□□ -0.19
ACER3-201ENST00000278544 CLCN6P51797 869 aa13.86□□□□□ -0.19
ACER3-201ENST00000278544 KRT17Q04695 432 aa13.86□□□□□ -0.19
ACER3-201ENST00000278544 ELAVL2Q12926 359 aaKnown RBP13.86□□□□□ -0.19
ACER3-201ENST00000278544 GPR17Q13304 367 aa13.86□□□□□ -0.19
ACER3-201ENST00000278544 SCD5Q86SK9 330 aa13.86□□□□□ -0.19
ACER3-201ENST00000278544 NUP93Q8N1F7 819 aa13.86□□□□□ -0.19
ACER3-201ENST00000278544 GLIS1Q8NBF1 620 aa13.86□□□□□ -0.19
ACER3-201ENST00000278544 RNF139Q8WU17 664 aa13.86□□□□□ -0.19
ACER3-201ENST00000278544 TMEM175Q9BSA9 504 aa13.86□□□□□ -0.19
ACER3-201ENST00000278544 TMEM121Q9BTD3 319 aa13.86□□□□□ -0.19
ACER3-201ENST00000278544 MRPL17Q9NRX2 175 aaKnown RBP13.86□□□□□ -0.19
ACER3-201ENST00000278544 NUP205Q92621 2012 aa13.86□□□□□ -0.19
ACER3-201ENST00000278544 TNRC18O15417 2968 aaPredicted RBP13.86□□□□□ -0.19
ACER3-201ENST00000278544 PSTPIP1O43586 416 aa13.86□□□□□ -0.19
ACER3-201ENST00000278544 IRF1P10914 325 aa13.86□□□□□ -0.19
ACER3-201ENST00000278544 DNAJB1P25685 340 aa13.86□□□□□ -0.19
ACER3-201ENST00000278544 FAM193AP78312 1265 aa13.86□□□□□ -0.19
ACER3-201ENST00000278544 PPP1R7Q15435 360 aa13.86□□□□□ -0.19
ACER3-201ENST00000278544 C10orf120Q5SQS8 335 aa13.86□□□□□ -0.19
ACER3-201ENST00000278544 RASIP1Q5U651 963 aa13.86□□□□□ -0.19
ACER3-201ENST00000278544 OTUD1Q5VV17 481 aaPredicted RBP13.86□□□□□ -0.19
ACER3-201ENST00000278544 TRPC7Q9HCX4 862 aa13.86□□□□□ -0.19
ACER3-201ENST00000278544 CNGB3Q9NQW8 809 aa13.86□□□□□ -0.19
ACER3-201ENST00000278544 ATP8B3O60423 1300 aa13.86□□□□□ -0.19
ACER3-201ENST00000278544 TRDMT1O14717 391 aaKnown RBP13.85□□□□□ -0.19
ACER3-201ENST00000278544 LAG3P18627 525 aa13.85□□□□□ -0.19
ACER3-201ENST00000278544 GTF2F1P35269 517 aaKnown RBP eCLIP13.85□□□□□ -0.19
ACER3-201ENST00000278544 MRPL58Q14197 206 aaKnown RBP13.85□□□□□ -0.19
ACER3-201ENST00000278544 RWDD4Q6NW29 188 aaKnown RBP13.85□□□□□ -0.19
ACER3-201ENST00000278544 CYP4V2Q6ZWL3 525 aaPredicted RBP13.85□□□□□ -0.19
ACER3-201ENST00000278544 SLC22A17Q8WUG5 538 aa13.85□□□□□ -0.19
ACER3-201ENST00000278544 CYP2S1Q96SQ9 504 aa13.85□□□□□ -0.19
ACER3-201ENST00000278544 DDX23Q9BUQ8 820 aaKnown RBP13.85□□□□□ -0.19
ACER3-201ENST00000278544 TKTL2Q9H0I9 626 aa13.85□□□□□ -0.19
ACER3-201ENST00000278544 DYNC1I1O14576 645 aa13.85□□□□□ -0.19
ACER3-201ENST00000278544 YWHAQP27348 245 aa13.85□□□□□ -0.19
ACER3-201ENST00000278544 NOS2P35228 1153 aa13.85□□□□□ -0.19
ACER3-201ENST00000278544 TUBB2AQ13885 445 aa13.85□□□□□ -0.19
ACER3-201ENST00000278544 TCEAL1Q15170 157 aa13.85□□□□□ -0.19
ACER3-201ENST00000278544 SKIDA1Q1XH10 827 aa13.85□□□□□ -0.19
ACER3-201ENST00000278544 HP1BP3Q5SSJ5 553 aaPredicted RBP13.85□□□□□ -0.19
ACER3-201ENST00000278544 CCDC70Q6NSX1 233 aa13.85□□□□□ -0.19
ACER3-201ENST00000278544 BHLHA9Q7RTU4 235 aa13.85□□□□□ -0.19
ACER3-201ENST00000278544 KATNAL2Q8IYT4 538 aa13.85□□□□□ -0.19
ACER3-201ENST00000278544 RASGEF1CQ8N431 466 aa13.85□□□□□ -0.19
ACER3-201ENST00000278544 ACTL9Q8TC94 416 aa13.85□□□□□ -0.19
ACER3-201ENST00000278544 DQX1Q8TE96 717 aaKnown RBP13.85□□□□□ -0.19
ACER3-201ENST00000278544 HTATIP2Q9BUP3 242 aa13.85□□□□□ -0.19
ACER3-201ENST00000278544 TUBB2BQ9BVA1 445 aa13.85□□□□□ -0.19
ACER3-201ENST00000278544 PLVAPQ9BX97 442 aa13.85□□□□□ -0.19
ACER3-201ENST00000278544 RC3H2Q9HBD1 1191 aaKnown RBP13.85□□□□□ -0.19
ACER3-201ENST00000278544 CSNK1G1Q9HCP0 422 aa13.85□□□□□ -0.19
ACER3-201ENST00000278544 STAP1Q9ULZ2 295 aa13.85□□□□□ -0.19
ACER3-201ENST00000278544 MYO18AQ92614 2054 aaKnown RBP13.85□□□□□ -0.19
ACER3-201ENST00000278544 H7C4K7 107 aa13.85□□□□□ -0.19
ACER3-201ENST00000278544 RFPL2O75678 378 aa13.85□□□□□ -0.19
ACER3-201ENST00000278544 KRT7P08729 469 aa13.85□□□□□ -0.19
ACER3-201ENST00000278544 KLRC2P26717 231 aa13.85□□□□□ -0.19
ACER3-201ENST00000278544 CDKN2BP42772 138 aa13.85□□□□□ -0.19
ACER3-201ENST00000278544 DR1Q01658 176 aa13.85□□□□□ -0.19
ACER3-201ENST00000278544 OTUD4Q01804 1114 aaKnown RBP13.85□□□□□ -0.19
ACER3-201ENST00000278544 TWF1Q12792 350 aa13.85□□□□□ -0.19
ACER3-201ENST00000278544 SLC25A52Q3SY17 297 aa13.85□□□□□ -0.19
ACER3-201ENST00000278544 EXD1Q8NHP7 514 aa13.85□□□□□ -0.19
ACER3-201ENST00000278544 POF1BQ8WVV4 589 aa13.85□□□□□ -0.19
ACER3-201ENST00000278544 PWWP2AQ96N64 755 aa13.85□□□□□ -0.19
ACER3-201ENST00000278544 OR6C75A6NL08 312 aa13.84□□□□□ -0.19
ACER3-201ENST00000278544 TNFRSF10BO14763 440 aa13.84□□□□□ -0.19
ACER3-201ENST00000278544 DESP17661 470 aa13.84□□□□□ -0.19
ACER3-201ENST00000278544 CETN2P41208 172 aa13.84□□□□□ -0.19
ACER3-201ENST00000278544 TFDP3Q5H9I0 405 aa13.84□□□□□ -0.19
ACER3-201ENST00000278544 PSRC1Q6PGN9 363 aaPredicted RBP13.84□□□□□ -0.19
ACER3-201ENST00000278544 GPR161Q8N6U8 529 aaKnown RBP13.84□□□□□ -0.19
ACER3-201ENST00000278544 DEPDC1BQ8WUY9 529 aa13.84□□□□□ -0.19
ACER3-201ENST00000278544 KCTD13Q8WZ19 329 aa13.84□□□□□ -0.19
ACER3-201ENST00000278544 RAD9AQ99638 391 aa13.84□□□□□ -0.19
ACER3-201ENST00000278544 WDCPQ9H6R7 721 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms