RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 CAMKK1Q8N5S9 505 aa15.15■□□□□ 0.02
HMGN3-201ENST00000275036 RBBP8NLQ8NC74 664 aaPredicted RBP15.15■□□□□ 0.02
HMGN3-201ENST00000275036 EXOC4Q96A65 974 aa15.15■□□□□ 0.02
HMGN3-201ENST00000275036 CRACR2AQ9BSW2 395 aa15.15■□□□□ 0.02
HMGN3-201ENST00000275036 SPHK2Q9NRA0 654 aa15.15■□□□□ 0.02
HMGN3-201ENST00000275036 HESX1Q9UBX0 185 aa15.15■□□□□ 0.02
HMGN3-201ENST00000275036 HCN2Q9UL51 889 aa15.15■□□□□ 0.02
HMGN3-201ENST00000275036 RAB23Q9ULC3 237 aa15.15■□□□□ 0.02
HMGN3-201ENST00000275036 KIAA1257Q9ULG3 409 aa15.15■□□□□ 0.02
HMGN3-201ENST00000275036 USP18Q9UMW8 372 aa15.15■□□□□ 0.02
HMGN3-201ENST00000275036 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.15■□□□□ 0.02
HMGN3-201ENST00000275036 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.15■□□□□ 0.02
HMGN3-201ENST00000275036 A0A0A0MRY4 1105 aa15.14■□□□□ 0.01
HMGN3-201ENST00000275036 DCLK1O15075 740 aa15.14■□□□□ 0.01
HMGN3-201ENST00000275036 HOXC11O43248 304 aaPredicted RBP15.14■□□□□ 0.01
HMGN3-201ENST00000275036 RPP40O75818 363 aaKnown RBP15.14■□□□□ 0.01
HMGN3-201ENST00000275036 STC2O76061 302 aa15.14■□□□□ 0.01
HMGN3-201ENST00000275036 ZBED1O96006 694 aa15.14■□□□□ 0.01
HMGN3-201ENST00000275036 RALAP11233 206 aa15.14■□□□□ 0.01
HMGN3-201ENST00000275036 SLC9A1P19634 815 aa15.14■□□□□ 0.01
HMGN3-201ENST00000275036 EIF2DP41214 584 aaKnown RBP15.14■□□□□ 0.01
HMGN3-201ENST00000275036 KIR2DL1P43626 348 aaPredicted RBP15.14■□□□□ 0.01
HMGN3-201ENST00000275036 SLC8A3P57103 927 aa15.14■□□□□ 0.01
HMGN3-201ENST00000275036 YWHAGP61981 247 aaKnown RBP eCLIP15.14■□□□□ 0.01
HMGN3-201ENST00000275036 GAD2Q05329 585 aa15.14■□□□□ 0.01
HMGN3-201ENST00000275036 ADIGQ0VDE8 80 aa15.14■□□□□ 0.01
HMGN3-201ENST00000275036 EFEMP1Q12805 493 aa15.14■□□□□ 0.01
HMGN3-201ENST00000275036 CNGA2Q16280 664 aa15.14■□□□□ 0.01
HMGN3-201ENST00000275036 PMF1Q6P1K2 205 aa15.14■□□□□ 0.01
HMGN3-201ENST00000275036 TMEM92Q6UXU6 159 aa15.14■□□□□ 0.01
HMGN3-201ENST00000275036 Q6ZNB5 142 aa15.14■□□□□ 0.01
HMGN3-201ENST00000275036 CEP68Q76N32 757 aa15.14■□□□□ 0.01
HMGN3-201ENST00000275036 MIB1Q86YT6 1006 aa15.14■□□□□ 0.01
HMGN3-201ENST00000275036 CCDC33Q8N5R6 958 aa15.14■□□□□ 0.01
HMGN3-201ENST00000275036 ALLCQ8N6M5 410 aa15.14■□□□□ 0.01
HMGN3-201ENST00000275036 NAT16Q8N8M0 369 aa15.14■□□□□ 0.01
HMGN3-201ENST00000275036 GPT2Q8TD30 523 aa15.14■□□□□ 0.01
HMGN3-201ENST00000275036 SLC35F5Q8WV83 523 aa15.14■□□□□ 0.01
HMGN3-201ENST00000275036 SECISBP2LQ93073 1101 aaKnown RBP15.14■□□□□ 0.01
HMGN3-201ENST00000275036 ACDQ96AP0 544 aa15.14■□□□□ 0.01
HMGN3-201ENST00000275036 PNKPQ96T60 521 aa15.14■□□□□ 0.01
HMGN3-201ENST00000275036 RASAL2Q9UJF2 1139 aa15.14■□□□□ 0.01
HMGN3-201ENST00000275036 CNTN6Q9UQ52 1028 aa15.14■□□□□ 0.01
HMGN3-201ENST00000275036 SGK1O00141 431 aa15.13■□□□□ 0.01
HMGN3-201ENST00000275036 AXIN1O15169 862 aa15.13■□□□□ 0.01
HMGN3-201ENST00000275036 TULP3O75386 442 aa15.13■□□□□ 0.01
HMGN3-201ENST00000275036 APBB3O95704 486 aa15.13■□□□□ 0.01
HMGN3-201ENST00000275036 KLKB1P03952 638 aa15.13■□□□□ 0.01
HMGN3-201ENST00000275036 SETSIPP0DME0 302 aa15.13■□□□□ 0.01
HMGN3-201ENST00000275036 RGS7P49802 495 aa15.13■□□□□ 0.01
HMGN3-201ENST00000275036 C1QBPQ07021 282 aaKnown RBP15.13■□□□□ 0.01
HMGN3-201ENST00000275036 CCDC6Q16204 474 aa15.13■□□□□ 0.01
HMGN3-201ENST00000275036 TRIM65Q6PJ69 517 aa15.13■□□□□ 0.01
HMGN3-201ENST00000275036 IL17RCQ8NAC3 791 aa15.13■□□□□ 0.01
HMGN3-201ENST00000275036 KCTD13Q8WZ19 329 aa15.13■□□□□ 0.01
HMGN3-201ENST00000275036 TPSD1Q9BZJ3 242 aa15.13■□□□□ 0.01
HMGN3-201ENST00000275036 LRRC4Q9HBW1 653 aa15.13■□□□□ 0.01
HMGN3-201ENST00000275036 UBE2TQ9NPD8 197 aaPredicted RBP15.13■□□□□ 0.01
HMGN3-201ENST00000275036 ARHGEF4Q9NR80 690 aa15.13■□□□□ 0.01
HMGN3-201ENST00000275036 SEMA4GQ9NTN9 838 aa15.13■□□□□ 0.01
HMGN3-201ENST00000275036 EBF1Q9UH73 591 aa15.13■□□□□ 0.01
HMGN3-201ENST00000275036 MMP17Q9ULZ9 603 aa15.13■□□□□ 0.01
HMGN3-201ENST00000275036 YJEFN3A6XGL0 299 aa15.12■□□□□ 0.01
HMGN3-201ENST00000275036 E7ENQ6 273 aa15.12■□□□□ 0.01
HMGN3-201ENST00000275036 M0QYV0 167 aa15.12■□□□□ 0.01
HMGN3-201ENST00000275036 PIK3R2O00459 728 aa15.12■□□□□ 0.01
HMGN3-201ENST00000275036 ADAM23O75077 832 aa15.12■□□□□ 0.01
HMGN3-201ENST00000275036 KLF8O95600 359 aaPredicted RBP15.12■□□□□ 0.01
HMGN3-201ENST00000275036 HMBSP08397 361 aa15.12■□□□□ 0.01
HMGN3-201ENST00000275036 LCP1P13796 627 aa15.12■□□□□ 0.01
HMGN3-201ENST00000275036 TIE1P35590 1138 aa15.12■□□□□ 0.01
HMGN3-201ENST00000275036 GOLGA8FQ08AF8 430 aa15.12■□□□□ 0.01
HMGN3-201ENST00000275036 GOLGA8DPQ0D2H9 430 aa15.12■□□□□ 0.01
HMGN3-201ENST00000275036 ANO4Q32M45 955 aa15.12■□□□□ 0.01
HMGN3-201ENST00000275036 HSP90AA4PQ58FG1 418 aa15.12■□□□□ 0.01
HMGN3-201ENST00000275036 TPGS1Q6ZTW0 290 aa15.12■□□□□ 0.01
HMGN3-201ENST00000275036 TADA2BQ86TJ2 420 aa15.12■□□□□ 0.01
HMGN3-201ENST00000275036 RASSF3Q86WH2 238 aa15.12■□□□□ 0.01
HMGN3-201ENST00000275036 ARHGAP18Q8N392 663 aa15.12■□□□□ 0.01
HMGN3-201ENST00000275036 GPR161Q8N6U8 529 aaKnown RBP15.12■□□□□ 0.01
HMGN3-201ENST00000275036 TXNDC5Q8NBS9 432 aaKnown RBP15.12■□□□□ 0.01
HMGN3-201ENST00000275036 MDGA1Q8NFP4 955 aa15.12■□□□□ 0.01
HMGN3-201ENST00000275036 CLEC4CQ8WTT0 213 aa15.12■□□□□ 0.01
HMGN3-201ENST00000275036 CDK5RAP1Q96SZ6 601 aaKnown RBP15.12■□□□□ 0.01
HMGN3-201ENST00000275036 THAP9Q9H5L6 903 aa15.12■□□□□ 0.01
HMGN3-201ENST00000275036 ACP6Q9NPH0 428 aa15.12■□□□□ 0.01
HMGN3-201ENST00000275036 LSM7Q9UK45 103 aaKnown RBP15.12■□□□□ 0.01
HMGN3-201ENST00000275036 AJAP1Q9UKB5 411 aaPredicted RBP15.12■□□□□ 0.01
HMGN3-201ENST00000275036 INVSQ9Y283 1065 aa15.12■□□□□ 0.01
HMGN3-201ENST00000275036 THADAQ6YHU6 1953 aa15.11■□□□□ 0.01
HMGN3-201ENST00000275036 NUP205Q92621 2012 aa15.11■□□□□ 0.01
HMGN3-201ENST00000275036 MED19A0JLT2 244 aaPredicted RBP15.11■□□□□ 0.01
HMGN3-201ENST00000275036 BECN2A8MW95 431 aa15.11■□□□□ 0.01
HMGN3-201ENST00000275036 GDF9O60383 454 aa15.11■□□□□ 0.01
HMGN3-201ENST00000275036 EPN2O95208 641 aa15.11■□□□□ 0.01
HMGN3-201ENST00000275036 APODP05090 189 aa15.11■□□□□ 0.01
HMGN3-201ENST00000275036 KRT5P13647 590 aa15.11■□□□□ 0.01
HMGN3-201ENST00000275036 PON1P27169 355 aa15.11■□□□□ 0.01
HMGN3-201ENST00000275036 ERCC5P28715 1186 aaPredicted RBP15.11■□□□□ 0.01
HMGN3-201ENST00000275036 GRIA2P42262 883 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms