RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 ADCY3O60266 1144 aa13.37□□□□□ -0.27
COL8A1-202ENST00000273342 KLHL41O60662 606 aa13.37□□□□□ -0.27
COL8A1-202ENST00000273342 PFDN1O60925 122 aa13.37□□□□□ -0.27
COL8A1-202ENST00000273342 DGKIO75912 1065 aa13.37□□□□□ -0.27
COL8A1-202ENST00000273342 APOC2P02655 101 aa13.37□□□□□ -0.27
COL8A1-202ENST00000273342 BPGMP07738 259 aa13.37□□□□□ -0.27
COL8A1-202ENST00000273342 SERPINA6P08185 405 aa13.37□□□□□ -0.27
COL8A1-202ENST00000273342 OSBPP22059 807 aa13.37□□□□□ -0.27
COL8A1-202ENST00000273342 LSAMPQ13449 338 aa13.37□□□□□ -0.27
COL8A1-202ENST00000273342 UNC5AQ6ZN44 842 aa13.37□□□□□ -0.27
COL8A1-202ENST00000273342 WDR75Q8IWA0 830 aaKnown RBP13.37□□□□□ -0.27
COL8A1-202ENST00000273342 GALNT4Q8N4A0 578 aa13.37□□□□□ -0.27
COL8A1-202ENST00000273342 DEPDC1BQ8WUY9 529 aa13.37□□□□□ -0.27
COL8A1-202ENST00000273342 MAGEB5Q9BZ81 275 aa13.37□□□□□ -0.27
COL8A1-202ENST00000273342 PLAC1Q9HBJ0 212 aa13.37□□□□□ -0.27
COL8A1-202ENST00000273342 PXMP2Q9NR77 195 aa13.37□□□□□ -0.27
COL8A1-202ENST00000273342 ZNF358Q9NW07 568 aa13.37□□□□□ -0.27
COL8A1-202ENST00000273342 FETUBQ9UGM5 382 aa13.37□□□□□ -0.27
COL8A1-202ENST00000273342 HMX2A2RU54 273 aa13.37□□□□□ -0.27
COL8A1-202ENST00000273342 SIN3BO75182 1162 aa13.37□□□□□ -0.27
COL8A1-202ENST00000273342 CSDE1O75534 798 aaKnown RBP13.37□□□□□ -0.27
COL8A1-202ENST00000273342 ERBB2P04626 1255 aa13.37□□□□□ -0.27
COL8A1-202ENST00000273342 SFNP31947 248 aa13.37□□□□□ -0.27
COL8A1-202ENST00000273342 PTGER2P43116 358 aa13.37□□□□□ -0.27
COL8A1-202ENST00000273342 PRKG1Q13976 671 aa13.37□□□□□ -0.27
COL8A1-202ENST00000273342 ZC3H12AQ5D1E8 599 aaKnown RBP13.37□□□□□ -0.27
COL8A1-202ENST00000273342 PPM1JQ5JR12 505 aa13.37□□□□□ -0.27
COL8A1-202ENST00000273342 FAM102AQ5T9C2 384 aaPredicted RBP13.37□□□□□ -0.27
COL8A1-202ENST00000273342 KRT27Q7Z3Y8 459 aa13.37□□□□□ -0.27
COL8A1-202ENST00000273342 MCF2L2Q86YR7 1114 aa13.37□□□□□ -0.27
COL8A1-202ENST00000273342 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.37□□□□□ -0.27
COL8A1-202ENST00000273342 SNRNP27Q8WVK2 155 aaKnown RBP13.37□□□□□ -0.27
COL8A1-202ENST00000273342 ATP6V0A1Q93050 837 aa13.37□□□□□ -0.27
COL8A1-202ENST00000273342 PIWIL1Q96J94 861 aaKnown RBP13.37□□□□□ -0.27
COL8A1-202ENST00000273342 CGRRF1Q99675 332 aa13.37□□□□□ -0.27
COL8A1-202ENST00000273342 OXCT2Q9BYC2 517 aaPredicted RBP13.37□□□□□ -0.27
COL8A1-202ENST00000273342 RNPEPQ9H4A4 650 aa13.37□□□□□ -0.27
COL8A1-202ENST00000273342 HERC5Q9UII4 1024 aaKnown RBP13.37□□□□□ -0.27
COL8A1-202ENST00000273342 POMPQ9Y244 141 aa13.37□□□□□ -0.27
COL8A1-202ENST00000273342 BTAF1O14981 1849 aa13.37□□□□□ -0.27
COL8A1-202ENST00000273342 C15orf38-AP3S2A0A0A6YYH1 394 aa13.37□□□□□ -0.27
COL8A1-202ENST00000273342 GOLGA8QA0A0J9YX86 632 aa13.37□□□□□ -0.27
COL8A1-202ENST00000273342 GOLGA8OA6NCC3 632 aa13.37□□□□□ -0.27
COL8A1-202ENST00000273342 SDR42E2A6NKP2 422 aa13.37□□□□□ -0.27
COL8A1-202ENST00000273342 GOLGA8NF8WBI6 632 aa13.37□□□□□ -0.27
COL8A1-202ENST00000273342 CFLARO15519 480 aa13.37□□□□□ -0.27
COL8A1-202ENST00000273342 NR3C2P08235 984 aa13.37□□□□□ -0.27
COL8A1-202ENST00000273342 SRGAP2CP0DJJ0 459 aa13.37□□□□□ -0.27
COL8A1-202ENST00000273342 NELFEP18615 380 aaKnown RBP13.37□□□□□ -0.27
COL8A1-202ENST00000273342 ABCG1P45844 678 aa13.37□□□□□ -0.27
COL8A1-202ENST00000273342 N4BP2L1Q5TBK1 243 aaPredicted RBP13.37□□□□□ -0.27
COL8A1-202ENST00000273342 TMCO4Q5TGY1 634 aa13.37□□□□□ -0.27
COL8A1-202ENST00000273342 CES3Q6UWW8 571 aa13.37□□□□□ -0.27
COL8A1-202ENST00000273342 FRMD7Q6ZUT3 714 aa13.37□□□□□ -0.27
COL8A1-202ENST00000273342 ARPINQ7Z6K5 226 aa13.37□□□□□ -0.27
COL8A1-202ENST00000273342 CAND1Q86VP6 1230 aaKnown RBP13.37□□□□□ -0.27
COL8A1-202ENST00000273342 NLGN1Q8N2Q7 840 aa13.37□□□□□ -0.27
COL8A1-202ENST00000273342 NME8Q8N427 588 aa13.37□□□□□ -0.27
COL8A1-202ENST00000273342 ICA1LQ8NDH6 482 aa13.37□□□□□ -0.27
COL8A1-202ENST00000273342 MCPH1Q8NEM0 835 aa13.37□□□□□ -0.27
COL8A1-202ENST00000273342 CEP70Q8NHQ1 597 aa13.37□□□□□ -0.27
COL8A1-202ENST00000273342 ADAM32Q8TC27 787 aa13.37□□□□□ -0.27
COL8A1-202ENST00000273342 OLFM3Q96PB7 478 aa13.37□□□□□ -0.27
COL8A1-202ENST00000273342 PDGFDQ9GZP0 370 aaPredicted RBP13.37□□□□□ -0.27
COL8A1-202ENST00000273342 SIRPGQ9P1W8 387 aa13.37□□□□□ -0.27
COL8A1-202ENST00000273342 HMGXB4Q9UGU5 601 aa13.37□□□□□ -0.27
COL8A1-202ENST00000273342 CDH22Q9UJ99 828 aa13.37□□□□□ -0.27
COL8A1-202ENST00000273342 AIM2O14862 343 aa13.36□□□□□ -0.27
COL8A1-202ENST00000273342 FKBP6O75344 327 aa13.36□□□□□ -0.27
COL8A1-202ENST00000273342 KRT38O76015 456 aa13.36□□□□□ -0.27
COL8A1-202ENST00000273342 ZBED1O96006 694 aa13.36□□□□□ -0.27
COL8A1-202ENST00000273342 HMGCRP04035 888 aa13.36□□□□□ -0.27
COL8A1-202ENST00000273342 PMLP29590 882 aa13.36□□□□□ -0.27
COL8A1-202ENST00000273342 MAP3K10Q02779 954 aa13.36□□□□□ -0.27
COL8A1-202ENST00000273342 KCNJ11Q14654 390 aa13.36□□□□□ -0.27
COL8A1-202ENST00000273342 TMEM132AQ24JP5 1023 aa13.36□□□□□ -0.27
COL8A1-202ENST00000273342 LGSNQ5TDP6 509 aa13.36□□□□□ -0.27
COL8A1-202ENST00000273342 CEP41Q9BYV8 373 aa13.36□□□□□ -0.27
COL8A1-202ENST00000273342 POPDC2Q9HBU9 364 aa13.36□□□□□ -0.27
COL8A1-202ENST00000273342 NGRNQ9NPE2 291 aaKnown RBP13.36□□□□□ -0.27
COL8A1-202ENST00000273342 HEMK1Q9Y5R4 338 aaPredicted RBP13.36□□□□□ -0.27
COL8A1-202ENST00000273342 COMMD3-BMI1R4GMX3 469 aa13.36□□□□□ -0.27
COL8A1-202ENST00000273342 SPDYE16A6NNV3 312 aaPredicted RBP13.36□□□□□ -0.27
COL8A1-202ENST00000273342 SLC1A6P48664 564 aa13.36□□□□□ -0.27
COL8A1-202ENST00000273342 ACTR2P61160 394 aa13.36□□□□□ -0.27
COL8A1-202ENST00000273342 TBL3Q12788 808 aaKnown RBP13.36□□□□□ -0.27
COL8A1-202ENST00000273342 MAP7Q14244 749 aa13.36□□□□□ -0.27
COL8A1-202ENST00000273342 KRT81Q14533 505 aa13.36□□□□□ -0.27
COL8A1-202ENST00000273342 ACAP1Q15027 740 aa13.36□□□□□ -0.27
COL8A1-202ENST00000273342 R3HDM1Q15032 1099 aaKnown RBP13.36□□□□□ -0.27
COL8A1-202ENST00000273342 TLR1Q15399 786 aa13.36□□□□□ -0.27
COL8A1-202ENST00000273342 ANGEL2Q5VTE6 544 aaKnown RBP13.36□□□□□ -0.27
COL8A1-202ENST00000273342 TNS4Q8IZW8 715 aa13.36□□□□□ -0.27
COL8A1-202ENST00000273342 PIWIL2Q8TC59 973 aaKnown RBP13.36□□□□□ -0.27
COL8A1-202ENST00000273342 ATXN10Q9UBB4 475 aa13.36□□□□□ -0.27
COL8A1-202ENST00000273342 YDJCA8MPS7 323 aa13.35□□□□□ -0.27
COL8A1-202ENST00000273342 NEMP1O14524 444 aa13.35□□□□□ -0.27
COL8A1-202ENST00000273342 KLF11O14901 512 aa13.35□□□□□ -0.27
COL8A1-202ENST00000273342 ASS1P00966 412 aaKnown RBP13.35□□□□□ -0.27
COL8A1-202ENST00000273342 TCN1P20061 433 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms