RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 C6orf203Q9P0P8 240 aaPredicted RBP13.59□□□□□ -0.23
NUP54-201ENST00000264883 KIAA1522Q9P206 1035 aaPredicted RBP13.59□□□□□ -0.23
NUP54-201ENST00000264883 TBX20Q9UMR3 447 aa13.59□□□□□ -0.23
NUP54-201ENST00000264883 FAM32AQ9Y421 112 aaKnown RBP13.59□□□□□ -0.23
NUP54-201ENST00000264883 ADAM23O75077 832 aa13.59□□□□□ -0.23
NUP54-201ENST00000264883 TFPTP0C1Z6 253 aa13.59□□□□□ -0.23
NUP54-201ENST00000264883 TSHRP16473 764 aa13.59□□□□□ -0.23
NUP54-201ENST00000264883 PTPN7P35236 360 aa13.59□□□□□ -0.23
NUP54-201ENST00000264883 TMED10P49755 219 aaKnown RBP13.59□□□□□ -0.23
NUP54-201ENST00000264883 SLC18A2Q05940 514 aa13.59□□□□□ -0.23
NUP54-201ENST00000264883 ITGA7Q13683 1181 aa13.59□□□□□ -0.23
NUP54-201ENST00000264883 TCHHL1Q5QJ38 904 aaPredicted RBP13.59□□□□□ -0.23
NUP54-201ENST00000264883 LRRC38Q5VT99 294 aa13.59□□□□□ -0.23
NUP54-201ENST00000264883 ATG16L1Q676U5 607 aa13.59□□□□□ -0.23
NUP54-201ENST00000264883 ELMSAN1Q6PJG2 1045 aa13.59□□□□□ -0.23
NUP54-201ENST00000264883 LPCAT2Q7L5N7 544 aa13.59□□□□□ -0.23
NUP54-201ENST00000264883 KBTBD6Q86V97 674 aa13.59□□□□□ -0.23
NUP54-201ENST00000264883 C4orf19Q8IY42 314 aa13.59□□□□□ -0.23
NUP54-201ENST00000264883 PQLC1Q8N2U9 271 aa13.59□□□□□ -0.23
NUP54-201ENST00000264883 TAS1R2Q8TE23 839 aa13.59□□□□□ -0.23
NUP54-201ENST00000264883 SNX27Q96L92 541 aa13.59□□□□□ -0.23
NUP54-201ENST00000264883 PPP1R10Q96QC0 940 aaKnown RBP13.59□□□□□ -0.23
NUP54-201ENST00000264883 EIF2AQ9BY44 585 aaKnown RBP13.59□□□□□ -0.23
NUP54-201ENST00000264883 ANKEF1Q9NU02 776 aa13.59□□□□□ -0.23
NUP54-201ENST00000264883 TBC1D23Q9NUY8 699 aa13.59□□□□□ -0.23
NUP54-201ENST00000264883 SORCS3Q9UPU3 1222 aa13.59□□□□□ -0.23
NUP54-201ENST00000264883 DICER1Q9UPY3 1922 aaKnown RBP13.58□□□□□ -0.24
NUP54-201ENST00000264883 LSM1O15116 133 aaKnown RBP13.58□□□□□ -0.24
NUP54-201ENST00000264883 EGFRP00533 1210 aa13.58□□□□□ -0.24
NUP54-201ENST00000264883 PROCP04070 461 aa13.58□□□□□ -0.24
NUP54-201ENST00000264883 THRAP10827 490 aa13.58□□□□□ -0.24
NUP54-201ENST00000264883 CD58P19256 250 aa13.58□□□□□ -0.24
NUP54-201ENST00000264883 GJC1P36383 396 aa13.58□□□□□ -0.24
NUP54-201ENST00000264883 PHKA2P46019 1235 aa13.58□□□□□ -0.24
NUP54-201ENST00000264883 COPAP53621 1224 aa13.58□□□□□ -0.24
NUP54-201ENST00000264883 NUP107P57740 925 aa13.58□□□□□ -0.24
NUP54-201ENST00000264883 CDK18Q07002 472 aa13.58□□□□□ -0.24
NUP54-201ENST00000264883 CYP24A1Q07973 514 aa13.58□□□□□ -0.24
NUP54-201ENST00000264883 PTK7Q13308 1070 aa13.58□□□□□ -0.24
NUP54-201ENST00000264883 BCL2A1Q16548 175 aa13.58□□□□□ -0.24
NUP54-201ENST00000264883 SLC30A10Q6XR72 485 aa13.58□□□□□ -0.24
NUP54-201ENST00000264883 CRLF3Q8IUI8 442 aa13.58□□□□□ -0.24
NUP54-201ENST00000264883 RAB3IL1Q8TBN0 382 aa13.58□□□□□ -0.24
NUP54-201ENST00000264883 ACTRT2Q8TDY3 377 aa13.58□□□□□ -0.24
NUP54-201ENST00000264883 E2F7Q96AV8 911 aa13.58□□□□□ -0.24
NUP54-201ENST00000264883 NLRP4Q96MN2 994 aa13.58□□□□□ -0.24
NUP54-201ENST00000264883 HAUS8Q9BT25 410 aa13.58□□□□□ -0.24
NUP54-201ENST00000264883 MECRQ9BV79 373 aa13.58□□□□□ -0.24
NUP54-201ENST00000264883 ZNF395Q9H8N7 513 aaPredicted RBP13.58□□□□□ -0.24
NUP54-201ENST00000264883 CYP4F11Q9HBI6 524 aa13.58□□□□□ -0.24
NUP54-201ENST00000264883 TBC1D22BQ9NU19 505 aa13.58□□□□□ -0.24
NUP54-201ENST00000264883 PSMD13Q9UNM6 376 aa13.58□□□□□ -0.24
NUP54-201ENST00000264883 CLEC11AQ9Y240 323 aa13.58□□□□□ -0.24
NUP54-201ENST00000264883 TMX2Q9Y320 296 aa13.58□□□□□ -0.24
NUP54-201ENST00000264883 TSC22D4Q9Y3Q8 395 aa13.58□□□□□ -0.24
NUP54-201ENST00000264883 UTRNP46939 3433 aa13.58□□□□□ -0.24
NUP54-201ENST00000264883 SDR42E2A6NKP2 422 aa13.58□□□□□ -0.24
NUP54-201ENST00000264883 SLC16A4O15374 487 aa13.58□□□□□ -0.24
NUP54-201ENST00000264883 GARTP22102 1010 aa13.58□□□□□ -0.24
NUP54-201ENST00000264883 YWHABP31946 246 aaKnown RBP13.58□□□□□ -0.24
NUP54-201ENST00000264883 HSD17B4P51659 736 aa13.58□□□□□ -0.24
NUP54-201ENST00000264883 PEX3P56589 373 aa13.58□□□□□ -0.24
NUP54-201ENST00000264883 CREB5Q02930 508 aa13.58□□□□□ -0.24
NUP54-201ENST00000264883 C1QBPQ07021 282 aaKnown RBP13.58□□□□□ -0.24
NUP54-201ENST00000264883 ZNF423Q2M1K9 1284 aa13.58□□□□□ -0.24
NUP54-201ENST00000264883 ANKDD1AQ495B1 522 aa13.58□□□□□ -0.24
NUP54-201ENST00000264883 RARS2Q5T160 578 aaKnown RBP13.58□□□□□ -0.24
NUP54-201ENST00000264883 THOC7Q6I9Y2 204 aaKnown RBP13.58□□□□□ -0.24
NUP54-201ENST00000264883 SLC2A7Q6PXP3 512 aa13.58□□□□□ -0.24
NUP54-201ENST00000264883 PHF13Q86YI8 300 aaPredicted RBP13.58□□□□□ -0.24
NUP54-201ENST00000264883 HPS6Q86YV9 775 aa13.58□□□□□ -0.24
NUP54-201ENST00000264883 CDAN1Q8IWY9 1227 aa13.58□□□□□ -0.24
NUP54-201ENST00000264883 PALM2Q8IXS6 379 aa13.58□□□□□ -0.24
NUP54-201ENST00000264883 TRIML2Q8N7C3 387 aa13.58□□□□□ -0.24
NUP54-201ENST00000264883 CASP10Q92851 521 aa13.58□□□□□ -0.24
NUP54-201ENST00000264883 CCDC127Q96BQ5 260 aa13.58□□□□□ -0.24
NUP54-201ENST00000264883 FRMD8P1Q9BZ68 369 aaPredicted RBP13.58□□□□□ -0.24
NUP54-201ENST00000264883 IP6K2Q9UHH9 426 aa13.58□□□□□ -0.24
NUP54-201ENST00000264883 GOLGA8IPA6NC78 632 aa13.57□□□□□ -0.24
NUP54-201ENST00000264883 GOLGA8JA6NMD2 632 aa13.57□□□□□ -0.24
NUP54-201ENST00000264883 TBC1D12O60347 775 aa13.57□□□□□ -0.24
NUP54-201ENST00000264883 OCM2P0CE71 109 aa13.57□□□□□ -0.24
NUP54-201ENST00000264883 OCMP0CE72 109 aaPredicted RBP13.57□□□□□ -0.24
NUP54-201ENST00000264883 TAL1P17542 331 aaPredicted RBP13.57□□□□□ -0.24
NUP54-201ENST00000264883 GMPSP49915 693 aaPredicted RBP13.57□□□□□ -0.24
NUP54-201ENST00000264883 BCAP31P51572 246 aa13.57□□□□□ -0.24
NUP54-201ENST00000264883 NFX1Q12986 1120 aaKnown RBP13.57□□□□□ -0.24
NUP54-201ENST00000264883 DMP1Q13316 513 aaPredicted RBP13.57□□□□□ -0.24
NUP54-201ENST00000264883 OASLQ15646 514 aaKnown RBP13.57□□□□□ -0.24
NUP54-201ENST00000264883 WDR44Q5JSH3 913 aa13.57□□□□□ -0.24
NUP54-201ENST00000264883 SMYD5Q6GMV2 418 aa13.57□□□□□ -0.24
NUP54-201ENST00000264883 PLEKHA7Q6IQ23 1121 aa13.57□□□□□ -0.24
NUP54-201ENST00000264883 SV2AQ7L0J3 742 aa13.57□□□□□ -0.24
NUP54-201ENST00000264883 CCDC33Q8N5R6 958 aa13.57□□□□□ -0.24
NUP54-201ENST00000264883 LZTR1Q8N653 840 aa13.57□□□□□ -0.24
NUP54-201ENST00000264883 SAMD3Q8N6K7 520 aa13.57□□□□□ -0.24
NUP54-201ENST00000264883 ITPKCQ96DU7 683 aa13.57□□□□□ -0.24
NUP54-201ENST00000264883 EBF4Q9BQW3 602 aa13.57□□□□□ -0.24
NUP54-201ENST00000264883 TMEM39BQ9GZU3 492 aa13.57□□□□□ -0.24
NUP54-201ENST00000264883 GNEQ9Y223 722 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms