RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 FAM13CQ8NE31 585 aa20.51■□□□□ 0.87
CSPG5-201ENST00000264723 USP6NLQ92738 828 aa20.51■□□□□ 0.87
CSPG5-201ENST00000264723 HDAC11Q96DB2 347 aa20.51■□□□□ 0.87
CSPG5-201ENST00000264723 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.51■□□□□ 0.87
CSPG5-201ENST00000264723 IL1RAPL1Q9NZN1 696 aa20.51■□□□□ 0.87
CSPG5-201ENST00000264723 ATP8B3O60423 1300 aa20.51■□□□□ 0.87
CSPG5-201ENST00000264723 ATXN2Q99700 1313 aaKnown RBP20.51■□□□□ 0.87
CSPG5-201ENST00000264723 CCDC88AQ3V6T2 1871 aa20.51■□□□□ 0.87
CSPG5-201ENST00000264723 GOLGA4Q13439 2230 aaKnown RBP20.51■□□□□ 0.87
CSPG5-201ENST00000264723 GOLGA8QA0A0J9YX86 632 aa20.51■□□□□ 0.87
CSPG5-201ENST00000264723 GOLGA8OA6NCC3 632 aa20.51■□□□□ 0.87
CSPG5-201ENST00000264723 GOLGA8NF8WBI6 632 aa20.51■□□□□ 0.87
CSPG5-201ENST00000264723 MTA2O94776 668 aa20.51■□□□□ 0.87
CSPG5-201ENST00000264723 CALB2P22676 271 aa20.51■□□□□ 0.87
CSPG5-201ENST00000264723 PPIL2Q13356 520 aa20.51■□□□□ 0.87
CSPG5-201ENST00000264723 HIC1Q14526 733 aa20.51■□□□□ 0.87
CSPG5-201ENST00000264723 ALYREFQ86V81 257 aaKnown RBP20.51■□□□□ 0.87
CSPG5-201ENST00000264723 RAET1EQ8TD07 263 aa20.51■□□□□ 0.87
CSPG5-201ENST00000264723 EDEM1Q92611 657 aa20.51■□□□□ 0.87
CSPG5-201ENST00000264723 PPWD1Q96BP3 646 aaKnown RBP20.51■□□□□ 0.87
CSPG5-201ENST00000264723 RNPEPL1Q9HAU8 725 aa20.51■□□□□ 0.87
CSPG5-201ENST00000264723 STARD13Q9Y3M8 1113 aa20.51■□□□□ 0.87
CSPG5-201ENST00000264723 SNCAIPQ9Y6H5 919 aa20.51■□□□□ 0.87
CSPG5-201ENST00000264723 KCNK1O00180 336 aa20.51■□□□□ 0.87
CSPG5-201ENST00000264723 STRNO43815 780 aa20.51■□□□□ 0.87
CSPG5-201ENST00000264723 AMPD1P23109 780 aa20.51■□□□□ 0.87
CSPG5-201ENST00000264723 OGDHQ02218 1023 aa20.51■□□□□ 0.87
CSPG5-201ENST00000264723 DCAF4L1Q3SXM0 396 aa20.51■□□□□ 0.87
CSPG5-201ENST00000264723 SPATA2LQ8IUW3 424 aaPredicted RBP20.51■□□□□ 0.87
CSPG5-201ENST00000264723 ADGRF2Q8IZF7 708 aa20.51■□□□□ 0.87
CSPG5-201ENST00000264723 STK32AQ8WU08 396 aa20.51■□□□□ 0.87
CSPG5-201ENST00000264723 GTF3C2Q8WUA4 911 aaPredicted RBP20.51■□□□□ 0.87
CSPG5-201ENST00000264723 SKA2Q8WVK7 121 aaPredicted RBP20.51■□□□□ 0.87
CSPG5-201ENST00000264723 CPT1BQ92523 772 aa20.51■□□□□ 0.87
CSPG5-201ENST00000264723 GPR20Q99678 358 aa20.51■□□□□ 0.87
CSPG5-201ENST00000264723 EPAS1Q99814 870 aa20.51■□□□□ 0.87
CSPG5-201ENST00000264723 TMEM109Q9BVC6 243 aa20.51■□□□□ 0.87
CSPG5-201ENST00000264723 BATF3Q9NR55 127 aa20.51■□□□□ 0.87
CSPG5-201ENST00000264723 ABI2Q9NYB9 513 aaPredicted RBP20.51■□□□□ 0.87
CSPG5-201ENST00000264723 DNAJC16Q9Y2G8 782 aa20.51■□□□□ 0.87
CSPG5-201ENST00000264723 CCDC130P13994 396 aa20.5■□□□□ 0.87
CSPG5-201ENST00000264723 ARF4P18085 180 aaPredicted RBP20.5■□□□□ 0.87
CSPG5-201ENST00000264723 EIF4BP23588 611 aaKnown RBP20.5■□□□□ 0.87
CSPG5-201ENST00000264723 AP2B1P63010 937 aa20.5■□□□□ 0.87
CSPG5-201ENST00000264723 AP1ARQ63HQ0 302 aa20.5■□□□□ 0.87
CSPG5-201ENST00000264723 AFAP1L2Q8N4X5 818 aa20.5■□□□□ 0.87
CSPG5-201ENST00000264723 C12orf50Q8NA57 414 aaPredicted RBP20.5■□□□□ 0.87
CSPG5-201ENST00000264723 SLC2A14Q8TDB8 520 aa20.5■□□□□ 0.87
CSPG5-201ENST00000264723 B3GNT5Q9BYG0 378 aa20.5■□□□□ 0.87
CSPG5-201ENST00000264723 DHX33Q9H6R0 707 aaKnown RBP20.5■□□□□ 0.87
CSPG5-201ENST00000264723 ACSS2Q9NR19 701 aa20.5■□□□□ 0.87
CSPG5-201ENST00000264723 ARL8BQ9NVJ2 186 aa20.5■□□□□ 0.87
CSPG5-201ENST00000264723 TCRBV9S1A1TA0A576 114 aa20.5■□□□□ 0.87
CSPG5-201ENST00000264723 CYP1A1P04798 512 aaPredicted RBP20.5■□□□□ 0.87
CSPG5-201ENST00000264723 RNF43Q68DV7 783 aa20.5■□□□□ 0.87
CSPG5-201ENST00000264723 ZNF669Q96BR6 464 aaPredicted RBP20.5■□□□□ 0.87
CSPG5-201ENST00000264723 PABPC5Q96DU9 382 aaKnown RBP20.5■□□□□ 0.87
CSPG5-201ENST00000264723 ASB7Q9H672 318 aa20.5■□□□□ 0.87
CSPG5-201ENST00000264723 DCLRE1BQ9H816 532 aa20.5■□□□□ 0.87
CSPG5-201ENST00000264723 ARHGEF37A1IGU5 675 aa20.5■□□□□ 0.87
CSPG5-201ENST00000264723 PPP1R12AO14974 1030 aaPredicted RBP20.5■□□□□ 0.87
CSPG5-201ENST00000264723 SOX11P35716 441 aa20.5■□□□□ 0.87
CSPG5-201ENST00000264723 CDKN2BP42772 138 aa20.5■□□□□ 0.87
CSPG5-201ENST00000264723 ART3Q13508 389 aa20.5■□□□□ 0.87
CSPG5-201ENST00000264723 TINF2Q9BSI4 451 aa20.5■□□□□ 0.87
CSPG5-201ENST00000264723 ST6GALNAC4Q9H4F1 302 aa20.5■□□□□ 0.87
CSPG5-201ENST00000264723 RPS6KL1Q9Y6S9 549 aa20.5■□□□□ 0.87
CSPG5-201ENST00000264723 PMLP29590 882 aa20.49■□□□□ 0.87
CSPG5-201ENST00000264723 PCSK7Q16549 785 aa20.49■□□□□ 0.87
CSPG5-201ENST00000264723 TTC7BQ86TV6 843 aa20.49■□□□□ 0.87
CSPG5-201ENST00000264723 TMEM192Q8IY95 271 aa20.49■□□□□ 0.87
CSPG5-201ENST00000264723 PFDN4Q9NQP4 134 aa20.49■□□□□ 0.87
CSPG5-201ENST00000264723 TSR3Q9UJK0 312 aaKnown RBP20.49■□□□□ 0.87
CSPG5-201ENST00000264723 PTDSS1P48651 473 aaKnown RBP20.49■□□□□ 0.87
CSPG5-201ENST00000264723 EFHC1Q5JVL4 640 aa20.49■□□□□ 0.87
CSPG5-201ENST00000264723 SH2D4BQ5SQS7 431 aa20.49■□□□□ 0.87
CSPG5-201ENST00000264723 CXCL17Q6UXB2 119 aa20.49■□□□□ 0.87
CSPG5-201ENST00000264723 SLC12A4Q9UP95 1085 aa20.49■□□□□ 0.87
CSPG5-201ENST00000264723 AP4E1Q9UPM8 1137 aa20.49■□□□□ 0.87
CSPG5-201ENST00000264723 MYH1P12882 1939 aa20.49■□□□□ 0.87
CSPG5-201ENST00000264723 SIGLEC16A6NMB1 481 aa20.49■□□□□ 0.87
CSPG5-201ENST00000264723 PDE5AO76074 875 aa20.49■□□□□ 0.87
CSPG5-201ENST00000264723 GLRBP48167 497 aa20.49■□□□□ 0.87
CSPG5-201ENST00000264723 SIX1Q15475 284 aaPredicted RBP20.49■□□□□ 0.87
CSPG5-201ENST00000264723 SLC27A1Q6PCB7 646 aa20.49■□□□□ 0.87
CSPG5-201ENST00000264723 DDX50Q9BQ39 737 aaKnown RBP20.49■□□□□ 0.87
CSPG5-201ENST00000264723 VTA1Q9NP79 307 aa20.49■□□□□ 0.87
CSPG5-201ENST00000264723 STRCP1A6NGW2 1772 aa20.49■□□□□ 0.87
CSPG5-201ENST00000264723 MYH7BA7E2Y1 1941 aa20.49■□□□□ 0.87
CSPG5-201ENST00000264723 APOC4-APOC2K7ER74 178 aa20.48■□□□□ 0.87
CSPG5-201ENST00000264723 TADA2AO75478 443 aa20.48■□□□□ 0.87
CSPG5-201ENST00000264723 APOC2P02655 101 aa20.48■□□□□ 0.87
CSPG5-201ENST00000264723 ERBB2P04626 1255 aa20.48■□□□□ 0.87
CSPG5-201ENST00000264723 VHLP40337 213 aa20.48■□□□□ 0.87
CSPG5-201ENST00000264723 TRIP10Q15642 601 aa20.48■□□□□ 0.87
CSPG5-201ENST00000264723 TRIM56Q9BRZ2 755 aaKnown RBP20.48■□□□□ 0.87
CSPG5-201ENST00000264723 CYP3A43Q9HB55 503 aa20.48■□□□□ 0.87
CSPG5-201ENST00000264723 AHDC1Q5TGY3 1603 aaPredicted RBP20.48■□□□□ 0.87
CSPG5-201ENST00000264723 EME2A4GXA9 379 aaPredicted RBP20.48■□□□□ 0.87
CSPG5-201ENST00000264723 ZMPSTE24O75844 475 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms