RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 OASLQ15646 514 aaKnown RBP11.7□□□□□ -0.54
PTPN4-201ENST00000263708 ZCWPW2Q504Y3 356 aa11.7□□□□□ -0.54
PTPN4-201ENST00000263708 FAXCQ5TGI0 409 aa11.7□□□□□ -0.54
PTPN4-201ENST00000263708 TDRD5Q8NAT2 981 aaKnown RBP11.7□□□□□ -0.54
PTPN4-201ENST00000263708 DPP3Q9NY33 737 aa11.7□□□□□ -0.54
PTPN4-201ENST00000263708 CHKBQ9Y259 395 aa11.7□□□□□ -0.54
PTPN4-201ENST00000263708 BTBD3Q9Y2F9 522 aa11.7□□□□□ -0.54
PTPN4-201ENST00000263708 CST8O60676 142 aa11.7□□□□□ -0.54
PTPN4-201ENST00000263708 MTA2O94776 668 aa11.7□□□□□ -0.54
PTPN4-201ENST00000263708 NPY2RP49146 381 aa11.7□□□□□ -0.54
PTPN4-201ENST00000263708 FAM9CQ8IZT9 166 aa11.7□□□□□ -0.54
PTPN4-201ENST00000263708 FAM111AQ96PZ2 611 aa11.7□□□□□ -0.54
PTPN4-201ENST00000263708 SEPHS2Q99611 448 aa11.7□□□□□ -0.54
PTPN4-201ENST00000263708 DNMT1P26358 1616 aaKnown RBP11.69□□□□□ -0.54
PTPN4-201ENST00000263708 ERVV-1B6SEH8 477 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 FDFT1P37268 417 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 USP11P51784 963 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 GEMP55040 296 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 ARF3P61204 181 aaPredicted RBP11.69□□□□□ -0.54
PTPN4-201ENST00000263708 ARF1P84077 181 aaKnown RBP11.69□□□□□ -0.54
PTPN4-201ENST00000263708 NR6A1Q15406 480 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 TAB1Q15750 504 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 C2CD6Q53TS8 623 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 GLRA4Q5JXX5 417 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 AREL1O15033 823 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 SSNA1O43805 119 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 PRDX5P30044 214 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 FMO5P49326 533 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 PJA1Q8NG27 643 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 CSGALNACT1Q8TDX6 532 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 MTFMTQ96DP5 389 aaKnown RBP11.69□□□□□ -0.54
PTPN4-201ENST00000263708 ACTR8Q9H981 624 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 A0A1W2PRG6 482 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 BCLAF3A2AJT9 711 aaKnown RBP11.69□□□□□ -0.54
PTPN4-201ENST00000263708 ACADLP28330 430 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 HPCAL1P37235 193 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 IFNGR2P38484 337 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 STARP49675 285 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 EFEMP1Q12805 493 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 EZH2Q15910 746 aaKnown RBP11.69□□□□□ -0.54
PTPN4-201ENST00000263708 SEL1L3Q68CR1 1132 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 TIPINQ9BVW5 301 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 NOL6Q9H6R4 1146 aaKnown RBP11.69□□□□□ -0.54
PTPN4-201ENST00000263708 EVA1BQ9NVM1 165 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 MAP3K6O95382 1288 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 EYA4O95677 639 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 CTSEP14091 401 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 PRKCEQ02156 737 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 OVGP1Q12889 678 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 NT5MQ9NPB1 228 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 LRRC4BQ9NT99 713 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 AFF2P51816 1311 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 RPAP1Q9BWH6 1393 aaPredicted RBP11.69□□□□□ -0.54
PTPN4-201ENST00000263708 SH3BGRLO75368 114 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 MYBPC1Q00872 1141 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 RUBCNQ92622 972 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 KLHL4Q9C0H6 718 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 VPS51Q9UID3 782 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 TRIM49D1C9J1S8 452 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 KIAA0391O15091 583 aaKnown RBP11.69□□□□□ -0.54
PTPN4-201ENST00000263708 KPNA5O15131 536 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 KPNA6O60684 536 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 SLC25A12O75746 678 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 ORC1Q13415 861 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 PMM1Q92871 262 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 HMG20AQ9NP66 347 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 RAB23Q9ULC3 237 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 DGAT1O75907 488 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 LTFP02788 710 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 ZCCHC18P0CG32 403 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 CYP2A7P20853 494 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 COLGALT2Q8IYK4 626 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 SGSM3Q96HU1 749 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 RACGAP1Q9H0H5 632 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 DSN1Q9H410 356 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 CYLDQ9NQC7 956 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 PCDHB12Q9Y5F1 795 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 RHOAP61586 193 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 BNC2Q6ZN30 1099 aaPredicted RBP11.69□□□□□ -0.54
PTPN4-201ENST00000263708 TBC1D10CQ8IV04 446 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 OR2W6PQ8NHA6 318 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 COL26A1Q96A83 441 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 MCRS1Q96EZ8 462 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 CAB39LQ9H9S4 337 aa11.69□□□□□ -0.54
PTPN4-201ENST00000263708 ARL3P36405 182 aa11.68□□□□□ -0.54
PTPN4-201ENST00000263708 SMU1Q2TAY7 513 aa11.68□□□□□ -0.54
PTPN4-201ENST00000263708 ARID3BQ8IVW6 561 aaPredicted RBP11.68□□□□□ -0.54
PTPN4-201ENST00000263708 NMD3Q96D46 503 aaKnown RBP11.68□□□□□ -0.54
PTPN4-201ENST00000263708 PPCSQ9HAB8 311 aa11.68□□□□□ -0.54
PTPN4-201ENST00000263708 MCUBQ9NWR8 336 aa11.68□□□□□ -0.54
PTPN4-201ENST00000263708 TM9SF1O15321 606 aa11.68□□□□□ -0.54
PTPN4-201ENST00000263708 NCKAP1Q9Y2A7 1128 aa11.68□□□□□ -0.54
PTPN4-201ENST00000263708 C1orf232A0A0U1RR37 186 aa11.68□□□□□ -0.54
PTPN4-201ENST00000263708 GLP2RO95838 553 aa11.68□□□□□ -0.54
PTPN4-201ENST00000263708 IFNA16P05015 189 aa11.68□□□□□ -0.54
PTPN4-201ENST00000263708 TGFBR2P37173 567 aa11.68□□□□□ -0.54
PTPN4-201ENST00000263708 CEBPGP53567 150 aa11.68□□□□□ -0.54
PTPN4-201ENST00000263708 SKP1P63208 163 aa11.68□□□□□ -0.54
PTPN4-201ENST00000263708 FNDC3BQ53EP0 1204 aaKnown RBP11.68□□□□□ -0.54
PTPN4-201ENST00000263708 KCNT1Q5JUK3 1230 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms