RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 VEPH1Q14D04 833 aa10.17□□□□□ -0.78
SNRNP40-201ENST00000263694 LLGL1Q15334 1064 aa10.17□□□□□ -0.78
SNRNP40-201ENST00000263694 AADACL2Q6P093 401 aa10.17□□□□□ -0.78
SNRNP40-201ENST00000263694 SCYL2Q6P3W7 929 aa10.17□□□□□ -0.78
SNRNP40-201ENST00000263694 CCDC149Q6ZUS6 474 aa10.17□□□□□ -0.78
SNRNP40-201ENST00000263694 FNIP1Q8TF40 1166 aa10.17□□□□□ -0.78
SNRNP40-201ENST00000263694 ALG3Q92685 438 aa10.17□□□□□ -0.78
SNRNP40-201ENST00000263694 GOLGA1Q92805 767 aa10.17□□□□□ -0.78
SNRNP40-201ENST00000263694 CASP10Q92851 521 aa10.17□□□□□ -0.78
SNRNP40-201ENST00000263694 PSMG2Q969U7 264 aa10.17□□□□□ -0.78
SNRNP40-201ENST00000263694 MRPL38Q96DV4 380 aaKnown RBP10.17□□□□□ -0.78
SNRNP40-201ENST00000263694 HES6Q96HZ4 224 aa10.17□□□□□ -0.78
SNRNP40-201ENST00000263694 ZNF512Q96ME7 567 aaPredicted RBP10.17□□□□□ -0.78
SNRNP40-201ENST00000263694 PEBP4Q96S96 227 aa10.17□□□□□ -0.78
SNRNP40-201ENST00000263694 NPY6RQ99463 290 aa10.17□□□□□ -0.78
SNRNP40-201ENST00000263694 LMAN2LQ9H0V9 348 aa10.17□□□□□ -0.78
SNRNP40-201ENST00000263694 CCSER2Q9H7U1 834 aa10.17□□□□□ -0.78
SNRNP40-201ENST00000263694 TMPRSS4Q9NRS4 437 aa10.17□□□□□ -0.78
SNRNP40-201ENST00000263694 ABCC13Q9NSE7 274 aa10.17□□□□□ -0.78
SNRNP40-201ENST00000263694 EHD2Q9NZN4 543 aa10.17□□□□□ -0.78
SNRNP40-201ENST00000263694 MAFFQ9ULX9 164 aa10.17□□□□□ -0.78
SNRNP40-201ENST00000263694 OBSL1O75147 1896 aa10.17□□□□□ -0.78
SNRNP40-201ENST00000263694 NOTCH4Q99466 2003 aa10.16□□□□□ -0.78
SNRNP40-201ENST00000263694 KIF2AO00139 706 aaPredicted RBP10.16□□□□□ -0.78
SNRNP40-201ENST00000263694 LINC01565O15544 149 aa10.16□□□□□ -0.78
SNRNP40-201ENST00000263694 MSI1O43347 362 aaKnown RBP10.16□□□□□ -0.78
SNRNP40-201ENST00000263694 TADA3O75528 432 aa10.16□□□□□ -0.78
SNRNP40-201ENST00000263694 ZMYND10O75800 440 aa10.16□□□□□ -0.78
SNRNP40-201ENST00000263694 RNF8O76064 485 aa10.16□□□□□ -0.78
SNRNP40-201ENST00000263694 URI1O94763 535 aaPredicted RBP10.16□□□□□ -0.78
SNRNP40-201ENST00000263694 GJA1P17302 382 aa10.16□□□□□ -0.78
SNRNP40-201ENST00000263694 PTPN9P43378 593 aa10.16□□□□□ -0.78
SNRNP40-201ENST00000263694 NTHL1P78549 312 aa10.16□□□□□ -0.78
SNRNP40-201ENST00000263694 SLC25A11Q02978 314 aaKnown RBP10.16□□□□□ -0.78
SNRNP40-201ENST00000263694 ZNF211Q13398 564 aaPredicted RBP10.16□□□□□ -0.78
SNRNP40-201ENST00000263694 GRIN2CQ14957 1233 aa10.16□□□□□ -0.78
SNRNP40-201ENST00000263694 RPS6KA1Q15418 735 aa10.16□□□□□ -0.78
SNRNP40-201ENST00000263694 DUSP6Q16828 381 aa10.16□□□□□ -0.78
SNRNP40-201ENST00000263694 SMTNL2Q2TAL5 461 aa10.16□□□□□ -0.78
SNRNP40-201ENST00000263694 LRIT3Q3SXY7 679 aa10.16□□□□□ -0.78
SNRNP40-201ENST00000263694 SLC25A52Q3SY17 297 aa10.16□□□□□ -0.78
SNRNP40-201ENST00000263694 KCNT1Q5JUK3 1230 aa10.16□□□□□ -0.78
SNRNP40-201ENST00000263694 DCAF12L1Q5VU92 463 aa10.16□□□□□ -0.78
SNRNP40-201ENST00000263694 CYP4V2Q6ZWL3 525 aaPredicted RBP10.16□□□□□ -0.78
SNRNP40-201ENST00000263694 ARCQ7LC44 396 aa10.16□□□□□ -0.78
SNRNP40-201ENST00000263694 TMEM150AQ86TG1 271 aa10.16□□□□□ -0.78
SNRNP40-201ENST00000263694 TAC4Q86UU9 113 aa10.16□□□□□ -0.78
SNRNP40-201ENST00000263694 NIPA2Q8N8Q9 360 aa10.16□□□□□ -0.78
SNRNP40-201ENST00000263694 KIF18AQ8NI77 898 aa10.16□□□□□ -0.78
SNRNP40-201ENST00000263694 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.16□□□□□ -0.78
SNRNP40-201ENST00000263694 DQX1Q8TE96 717 aaKnown RBP10.16□□□□□ -0.78
SNRNP40-201ENST00000263694 COG1Q8WTW3 980 aa10.16□□□□□ -0.78
SNRNP40-201ENST00000263694 CENPIQ92674 756 aaPredicted RBP10.16□□□□□ -0.78
SNRNP40-201ENST00000263694 NT5C3BQ969T7 300 aa10.16□□□□□ -0.78
SNRNP40-201ENST00000263694 FAM161BQ96MY7 647 aa10.16□□□□□ -0.78
SNRNP40-201ENST00000263694 SLITRK1Q96PX8 696 aa10.16□□□□□ -0.78
SNRNP40-201ENST00000263694 CORO1BQ9BR76 489 aa10.16□□□□□ -0.78
SNRNP40-201ENST00000263694 APOL5Q9BWW9 433 aa10.16□□□□□ -0.78
SNRNP40-201ENST00000263694 TLR8Q9NR97 1041 aaKnown RBP10.16□□□□□ -0.78
SNRNP40-201ENST00000263694 PIGVQ9NUD9 493 aa10.16□□□□□ -0.78
SNRNP40-201ENST00000263694 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.16□□□□□ -0.78
SNRNP40-201ENST00000263694 GPATCH2LQ9NWQ4 482 aa10.16□□□□□ -0.78
SNRNP40-201ENST00000263694 COMMD8Q9NX08 183 aa10.16□□□□□ -0.78
SNRNP40-201ENST00000263694 SMARCAL1Q9NZC9 954 aa10.16□□□□□ -0.78
SNRNP40-201ENST00000263694 DENND4CQ5VZ89 1909 aa10.16□□□□□ -0.78
SNRNP40-201ENST00000263694 PI4K2BG5E9Z4 385 aa10.15□□□□□ -0.78
SNRNP40-201ENST00000263694 KCNK3O14649 394 aa10.15□□□□□ -0.78
SNRNP40-201ENST00000263694 TRUB2O95900 331 aaKnown RBP10.15□□□□□ -0.78
SNRNP40-201ENST00000263694 ZDHHC11BP0C7U3 371 aa10.15□□□□□ -0.78
SNRNP40-201ENST00000263694 MYL4P12829 197 aa10.15□□□□□ -0.78
SNRNP40-201ENST00000263694 MAN1A1P33908 653 aa10.15□□□□□ -0.78
SNRNP40-201ENST00000263694 CTNNA1P35221 906 aaKnown RBP10.15□□□□□ -0.78
SNRNP40-201ENST00000263694 SLC1A1P43005 524 aa10.15□□□□□ -0.78
SNRNP40-201ENST00000263694 PEX5P50542 639 aa10.15□□□□□ -0.78
SNRNP40-201ENST00000263694 AMPD2Q01433 879 aa10.15□□□□□ -0.78
SNRNP40-201ENST00000263694 EFEMP1Q12805 493 aa10.15□□□□□ -0.78
SNRNP40-201ENST00000263694 TCEAL5Q5H9L2 206 aa10.15□□□□□ -0.78
SNRNP40-201ENST00000263694 C10orf120Q5SQS8 335 aa10.15□□□□□ -0.78
SNRNP40-201ENST00000263694 PAPD7Q5XG87 772 aaKnown RBP10.15□□□□□ -0.78
SNRNP40-201ENST00000263694 GAREM2Q75VX8 874 aa10.15□□□□□ -0.78
SNRNP40-201ENST00000263694 RSRC2Q7L4I2 434 aaKnown RBP10.15□□□□□ -0.78
SNRNP40-201ENST00000263694 FAM131BQ86XD5 332 aa10.15□□□□□ -0.78
SNRNP40-201ENST00000263694 CCDC185Q8N715 623 aa10.15□□□□□ -0.78
SNRNP40-201ENST00000263694 RNF139Q8WU17 664 aa10.15□□□□□ -0.78
SNRNP40-201ENST00000263694 LRCH3Q96II8 777 aa10.15□□□□□ -0.78
SNRNP40-201ENST00000263694 MS4A14Q96JA4 679 aa10.15□□□□□ -0.78
SNRNP40-201ENST00000263694 CAPZA3Q96KX2 299 aa10.15□□□□□ -0.78
SNRNP40-201ENST00000263694 CALR3Q96L12 384 aaKnown RBP10.15□□□□□ -0.78
SNRNP40-201ENST00000263694 MYRFLQ96LU7 910 aa10.15□□□□□ -0.78
SNRNP40-201ENST00000263694 OSBPL9Q96SU4 736 aa10.15□□□□□ -0.78
SNRNP40-201ENST00000263694 LRRC3Q9BY71 257 aa10.15□□□□□ -0.78
SNRNP40-201ENST00000263694 PLEKHA4Q9H4M7 779 aa10.15□□□□□ -0.78
SNRNP40-201ENST00000263694 FAM204AQ9H8W3 233 aa10.15□□□□□ -0.78
SNRNP40-201ENST00000263694 IL21Q9HBE4 155 aa10.15□□□□□ -0.78
SNRNP40-201ENST00000263694 ANLNQ9NQW6 1124 aa10.15□□□□□ -0.78
SNRNP40-201ENST00000263694 DDIT4Q9NX09 232 aa10.15□□□□□ -0.78
SNRNP40-201ENST00000263694 CDH22Q9UJ99 828 aa10.15□□□□□ -0.78
SNRNP40-201ENST00000263694 USP18Q9UMW8 372 aa10.15□□□□□ -0.78
SNRNP40-201ENST00000263694 SNX12Q9UMY4 172 aa10.15□□□□□ -0.78
SNRNP40-201ENST00000263694 PCDHA3Q9Y5H8 950 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms