RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 GSTCDQ8NEC7 633 aa13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 WNT8BQ93098 351 aa13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 LRRC4Q9HBW1 653 aa13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 FETUBQ9UGM5 382 aa13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 ZMYND8Q9ULU4 1186 aaPredicted RBP13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 ARL5CA6NH57 179 aa13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 FAM200BP0CF97 657 aa13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 RBL1P28749 1068 aa13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 NR2C2P49116 596 aa13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 ATXN1P54253 815 aaKnown RBP13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 NRLP54845 237 aa13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 GEMIN4P57678 1058 aaKnown RBP13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 YWHAZP63104 245 aaKnown RBP13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 MRPS5P82675 430 aaKnown RBP13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 MGAT3Q09327 533 aa13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 IFT88Q13099 833 aa13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 XRCC4Q13426 336 aa13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 KCNJ11Q14654 390 aa13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 LRRC14Q15048 493 aa13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 DSTYKQ6XUX3 929 aa13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 C3orf62Q6ZUJ4 267 aa13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 TRABD2AQ86V40 505 aa13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 C10orf67Q8IYJ2 551 aa13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 LPPQ93052 612 aa13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 PHF12Q96QT6 1004 aa13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 KCTD15Q96SI1 283 aaPredicted RBP13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 ADAM33Q9BZ11 813 aa13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 FRMD8Q9BZ67 464 aaPredicted RBP13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 XPNPEP3Q9NQH7 507 aa13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 SENP1Q9P0U3 644 aa13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 PSMC3IPQ9P2W1 217 aaPredicted RBP13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 RABGEF1Q9UJ41 708 aa13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 ABT1Q9ULW3 272 aaKnown RBP13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 CLUHO75153 1309 aa13.43□□□□□ -0.26
SPTLC1-201ENST00000262554 KRT15P19012 456 aa13.43□□□□□ -0.26
SPTLC1-201ENST00000262554 SSTR1P30872 391 aa13.43□□□□□ -0.26
SPTLC1-201ENST00000262554 RPL9P32969 192 aaKnown RBP13.43□□□□□ -0.26
SPTLC1-201ENST00000262554 NOS2P35228 1153 aa13.43□□□□□ -0.26
SPTLC1-201ENST00000262554 THPOP40225 353 aa13.43□□□□□ -0.26
SPTLC1-201ENST00000262554 ARL4AP40617 200 aa13.43□□□□□ -0.26
SPTLC1-201ENST00000262554 CLCNKBP51801 687 aa13.43□□□□□ -0.26
SPTLC1-201ENST00000262554 ADCY1Q08828 1119 aa13.43□□□□□ -0.26
SPTLC1-201ENST00000262554 KLHL38Q2WGJ6 581 aa13.43□□□□□ -0.26
SPTLC1-201ENST00000262554 DCAF6Q58WW2 860 aa13.43□□□□□ -0.26
SPTLC1-201ENST00000262554 EFHC2Q5JST6 749 aa13.43□□□□□ -0.26
SPTLC1-201ENST00000262554 C6orf89Q6UWU4 347 aa13.43□□□□□ -0.26
SPTLC1-201ENST00000262554 CLEC20AQ6ZU45 233 aa13.43□□□□□ -0.26
SPTLC1-201ENST00000262554 PAQR9Q6ZVX9 377 aa13.43□□□□□ -0.26
SPTLC1-201ENST00000262554 PSTKQ8IV42 348 aaKnown RBP13.43□□□□□ -0.26
SPTLC1-201ENST00000262554 LRRC34Q8IZ02 419 aa13.43□□□□□ -0.26
SPTLC1-201ENST00000262554 CCDC185Q8N715 623 aa13.43□□□□□ -0.26
SPTLC1-201ENST00000262554 ANKS4BQ8N8V4 417 aa13.43□□□□□ -0.26
SPTLC1-201ENST00000262554 CSPG4P5Q96PW8 444 aa13.43□□□□□ -0.26
SPTLC1-201ENST00000262554 SYT15Q9BQS2 421 aa13.43□□□□□ -0.26
SPTLC1-201ENST00000262554 KLC2Q9H0B6 622 aa13.43□□□□□ -0.26
SPTLC1-201ENST00000262554 PRDM16Q9HAZ2 1276 aa13.43□□□□□ -0.26
SPTLC1-201ENST00000262554 RAB6BQ9NRW1 208 aa13.43□□□□□ -0.26
SPTLC1-201ENST00000262554 KRT82Q9NSB4 513 aa13.43□□□□□ -0.26
SPTLC1-201ENST00000262554 SAMD15Q9P1V8 674 aa13.43□□□□□ -0.26
SPTLC1-201ENST00000262554 CACNG4Q9UBN1 327 aa13.43□□□□□ -0.26
SPTLC1-201ENST00000262554 STAP1Q9ULZ2 295 aa13.43□□□□□ -0.26
SPTLC1-201ENST00000262554 CASP8AP2Q9UKL3 1982 aa13.42□□□□□ -0.26
SPTLC1-201ENST00000262554 FAM47DPA6NHR8 397 aa13.42□□□□□ -0.26
SPTLC1-201ENST00000262554 ADAMTS4O75173 837 aa13.42□□□□□ -0.26
SPTLC1-201ENST00000262554 BEST1O76090 585 aa13.42□□□□□ -0.26
SPTLC1-201ENST00000262554 FBXO21O94952 628 aa13.42□□□□□ -0.26
SPTLC1-201ENST00000262554 ASGR1P07306 291 aa13.42□□□□□ -0.26
SPTLC1-201ENST00000262554 STX2P32856 288 aa13.42□□□□□ -0.26
SPTLC1-201ENST00000262554 MAGEA9P43362 315 aa13.42□□□□□ -0.26
SPTLC1-201ENST00000262554 RAB27AP51159 221 aa13.42□□□□□ -0.26
SPTLC1-201ENST00000262554 SCNN1GP51170 649 aa13.42□□□□□ -0.26
SPTLC1-201ENST00000262554 MAP3K7CLP57077 242 aa13.42□□□□□ -0.26
SPTLC1-201ENST00000262554 CACNB2Q08289 660 aaPredicted RBP13.42□□□□□ -0.26
SPTLC1-201ENST00000262554 SLC45A4Q5BKX6 768 aa13.42□□□□□ -0.26
SPTLC1-201ENST00000262554 RNF187Q5TA31 235 aaPredicted RBP13.42□□□□□ -0.26
SPTLC1-201ENST00000262554 KIAA0319Q5VV43 1072 aa13.42□□□□□ -0.26
SPTLC1-201ENST00000262554 AGMOQ6ZNB7 445 aa13.42□□□□□ -0.26
SPTLC1-201ENST00000262554 MRPL10Q7Z7H8 261 aaKnown RBP13.42□□□□□ -0.26
SPTLC1-201ENST00000262554 FAM131BQ86XD5 332 aa13.42□□□□□ -0.26
SPTLC1-201ENST00000262554 CCDC197Q8NCU1 140 aa13.42□□□□□ -0.26
SPTLC1-201ENST00000262554 NDRG1Q92597 394 aaKnown RBP13.42□□□□□ -0.26
SPTLC1-201ENST00000262554 TRABDQ9H4I3 376 aa13.42□□□□□ -0.26
SPTLC1-201ENST00000262554 ACSS3Q9H6R3 686 aa13.42□□□□□ -0.26
SPTLC1-201ENST00000262554 CRTAC1Q9NQ79 661 aa13.42□□□□□ -0.26
SPTLC1-201ENST00000262554 MIOSQ9NXC5 875 aa13.42□□□□□ -0.26
SPTLC1-201ENST00000262554 MTMR10Q9NXD2 777 aa13.42□□□□□ -0.26
SPTLC1-201ENST00000262554 RCOR3Q9P2K3 495 aaPredicted RBP13.42□□□□□ -0.26
SPTLC1-201ENST00000262554 FZD10Q9ULW2 581 aa13.42□□□□□ -0.26
SPTLC1-201ENST00000262554 TDRD15B5MCY1 1934 aaKnown RBP13.42□□□□□ -0.26
SPTLC1-201ENST00000262554 GOLGA6L7A0A1B0GV03 622 aa13.42□□□□□ -0.26
SPTLC1-201ENST00000262554 TRIM66O15016 1216 aa13.42□□□□□ -0.26
SPTLC1-201ENST00000262554 MAP3K6O95382 1288 aa13.42□□□□□ -0.26
SPTLC1-201ENST00000262554 ALDH1A1P00352 501 aa13.42□□□□□ -0.26
SPTLC1-201ENST00000262554 ELK3P41970 407 aa13.42□□□□□ -0.26
SPTLC1-201ENST00000262554 TKTL1P51854 596 aa13.42□□□□□ -0.26
SPTLC1-201ENST00000262554 PRKCZQ05513 592 aa13.42□□□□□ -0.26
SPTLC1-201ENST00000262554 TRIM32Q13049 653 aa13.42□□□□□ -0.26
SPTLC1-201ENST00000262554 MPP2Q14168 576 aa13.42□□□□□ -0.26
SPTLC1-201ENST00000262554 KCNA10Q16322 511 aa13.42□□□□□ -0.26
SPTLC1-201ENST00000262554 PKN2Q16513 984 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms