RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 PDZD8Q8NEN9 1154 aa12.15□□□□□ -0.46
PFDN1-201ENST00000261813 ZSCAN18Q8TBC5 510 aaPredicted RBP12.15□□□□□ -0.46
PFDN1-201ENST00000261813 OVCA2Q8WZ82 227 aa12.15□□□□□ -0.46
PFDN1-201ENST00000261813 FGF14Q92915 247 aa12.15□□□□□ -0.46
PFDN1-201ENST00000261813 HSFY1Q96LI6 401 aa12.15□□□□□ -0.46
PFDN1-201ENST00000261813 ASB16Q96NS5 453 aa12.15□□□□□ -0.46
PFDN1-201ENST00000261813 SLC22A12Q96S37 553 aa12.15□□□□□ -0.46
PFDN1-201ENST00000261813 AGPAT1Q99943 283 aa12.15□□□□□ -0.46
PFDN1-201ENST00000261813 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.15□□□□□ -0.46
PFDN1-201ENST00000261813 ULBP1Q9BZM6 244 aa12.15□□□□□ -0.46
PFDN1-201ENST00000261813 LHX5Q9H2C1 402 aa12.15□□□□□ -0.46
PFDN1-201ENST00000261813 SLITRK6Q9H5Y7 841 aa12.15□□□□□ -0.46
PFDN1-201ENST00000261813 NMUR1Q9HB89 426 aa12.15□□□□□ -0.46
PFDN1-201ENST00000261813 LRRC4Q9HBW1 653 aa12.15□□□□□ -0.46
PFDN1-201ENST00000261813 KCND1Q9NSA2 647 aa12.15□□□□□ -0.46
PFDN1-201ENST00000261813 OSER1Q9NX31 292 aa12.15□□□□□ -0.46
PFDN1-201ENST00000261813 MYH10P35580 1976 aa12.14□□□□□ -0.47
PFDN1-201ENST00000261813 ZNF638Q14966 1978 aaKnown RBP12.14□□□□□ -0.47
PFDN1-201ENST00000261813 MUC6Q6W4X9 2439 aa12.14□□□□□ -0.47
PFDN1-201ENST00000261813 SOWAHDA6NJG2 315 aa12.14□□□□□ -0.47
PFDN1-201ENST00000261813 PRAMEF12O95522 483 aa12.14□□□□□ -0.47
PFDN1-201ENST00000261813 ASGR2P07307 311 aa12.14□□□□□ -0.47
PFDN1-201ENST00000261813 LCP1P13796 627 aa12.14□□□□□ -0.47
PFDN1-201ENST00000261813 DDX6P26196 483 aaKnown RBP eCLIP12.14□□□□□ -0.476e-11■■■■■ 165.9
PFDN1-201ENST00000261813 FMO1Q01740 532 aa12.14□□□□□ -0.47
PFDN1-201ENST00000261813 CDR2Q01850 454 aa12.14□□□□□ -0.47
PFDN1-201ENST00000261813 PDCLQ13371 301 aa12.14□□□□□ -0.47
PFDN1-201ENST00000261813 SNX30Q5VWJ9 437 aa12.14□□□□□ -0.47
PFDN1-201ENST00000261813 PM20D1Q6GTS8 502 aa12.14□□□□□ -0.47
PFDN1-201ENST00000261813 SCD5Q86SK9 330 aa12.14□□□□□ -0.47
PFDN1-201ENST00000261813 MON1AQ86VX9 555 aa12.14□□□□□ -0.47
PFDN1-201ENST00000261813 RNF135Q8IUD6 432 aa12.14□□□□□ -0.47
PFDN1-201ENST00000261813 KIAA1524Q8TCG1 905 aa12.14□□□□□ -0.47
PFDN1-201ENST00000261813 CLEC4CQ8WTT0 213 aa12.14□□□□□ -0.47
PFDN1-201ENST00000261813 STK32AQ8WU08 396 aa12.14□□□□□ -0.47
PFDN1-201ENST00000261813 RSAD2Q8WXG1 361 aa12.14□□□□□ -0.47
PFDN1-201ENST00000261813 NDRG1Q92597 394 aaKnown RBP12.14□□□□□ -0.47
PFDN1-201ENST00000261813 SMARCD2Q92925 531 aa12.14□□□□□ -0.47
PFDN1-201ENST00000261813 RSPRY1Q96DX4 576 aa12.14□□□□□ -0.47
PFDN1-201ENST00000261813 CYP2S1Q96SQ9 504 aa12.14□□□□□ -0.47
PFDN1-201ENST00000261813 RPP25Q9BUL9 199 aaKnown RBP12.14□□□□□ -0.47
PFDN1-201ENST00000261813 SMG9Q9H0W8 520 aaKnown RBP12.14□□□□□ -0.47
PFDN1-201ENST00000261813 PDCL3Q9H2J4 239 aa12.14□□□□□ -0.47
PFDN1-201ENST00000261813 TRPC7Q9HCX4 862 aa12.14□□□□□ -0.47
PFDN1-201ENST00000261813 TJP2Q9UDY2 1190 aa12.14□□□□□ -0.47
PFDN1-201ENST00000261813 CEP83Q9Y592 693 aa12.14□□□□□ -0.47
PFDN1-201ENST00000261813 NUMBLQ9Y6R0 609 aa12.14□□□□□ -0.47
PFDN1-201ENST00000261813 MYO16Q9Y6X6 1858 aa12.13□□□□□ -0.47
PFDN1-201ENST00000261813 DENND4CQ5VZ89 1909 aa12.13□□□□□ -0.47
PFDN1-201ENST00000261813 A0A1W2PQH9 124 aa12.13□□□□□ -0.47
PFDN1-201ENST00000261813 FAM170AA1A519 330 aa12.13□□□□□ -0.47
PFDN1-201ENST00000261813 SOBPA7XYQ1 873 aa12.13□□□□□ -0.47
PFDN1-201ENST00000261813 E5RJQ4 531 aa12.13□□□□□ -0.47
PFDN1-201ENST00000261813 OLFM2O95897 454 aa12.13□□□□□ -0.47
PFDN1-201ENST00000261813 ZBED1O96006 694 aa12.13□□□□□ -0.47
PFDN1-201ENST00000261813 ABL1P00519 1130 aa12.13□□□□□ -0.47
PFDN1-201ENST00000261813 OAS1P00973 400 aaKnown RBP12.13□□□□□ -0.47
PFDN1-201ENST00000261813 GZMAP12544 262 aa12.13□□□□□ -0.47
PFDN1-201ENST00000261813 WEE1P30291 646 aa12.13□□□□□ -0.47
PFDN1-201ENST00000261813 CDH5P33151 784 aaPredicted RBP12.13□□□□□ -0.47
PFDN1-201ENST00000261813 VIPR2P41587 438 aa12.13□□□□□ -0.47
PFDN1-201ENST00000261813 DAOAP59103 153 aa12.13□□□□□ -0.47
PFDN1-201ENST00000261813 NOMO3P69849 1222 aa12.13□□□□□ -0.47
PFDN1-201ENST00000261813 ASTE1Q2TB18 679 aaPredicted RBP12.13□□□□□ -0.47
PFDN1-201ENST00000261813 PTPN20Q4JDL3 420 aa12.13□□□□□ -0.47
PFDN1-201ENST00000261813 TANGO2Q6ICL3 276 aa12.13□□□□□ -0.47
PFDN1-201ENST00000261813 RAD9BQ6WBX8 426 aa12.13□□□□□ -0.47
PFDN1-201ENST00000261813 ZNF571Q7Z3V5 609 aaPredicted RBP12.13□□□□□ -0.47
PFDN1-201ENST00000261813 ARID3BQ8IVW6 561 aaPredicted RBP12.13□□□□□ -0.47
PFDN1-201ENST00000261813 CMTM8Q8IZV2 173 aa12.13□□□□□ -0.47
PFDN1-201ENST00000261813 SIX6OS1Q8N1H7 587 aa12.13□□□□□ -0.47
PFDN1-201ENST00000261813 SCML4Q8N228 414 aa12.13□□□□□ -0.47
PFDN1-201ENST00000261813 ARL14EPQ8N8R7 260 aaPredicted RBP12.13□□□□□ -0.47
PFDN1-201ENST00000261813 OLIG1Q8TAK6 271 aa12.13□□□□□ -0.47
PFDN1-201ENST00000261813 CPXM1Q96SM3 734 aa12.13□□□□□ -0.47
PFDN1-201ENST00000261813 PCDHB18PQ96TA0 734 aa12.13□□□□□ -0.47
PFDN1-201ENST00000261813 SYT11Q9BT88 431 aa12.13□□□□□ -0.47
PFDN1-201ENST00000261813 PLA2G2FQ9BZM2 168 aa12.13□□□□□ -0.47
PFDN1-201ENST00000261813 TSGA10Q9BZW7 698 aa12.13□□□□□ -0.47
PFDN1-201ENST00000261813 RNF38Q9H0F5 515 aa12.13□□□□□ -0.47
PFDN1-201ENST00000261813 CCSER2Q9H7U1 834 aa12.13□□□□□ -0.47
PFDN1-201ENST00000261813 KCNK12Q9HB15 430 aa12.13□□□□□ -0.47
PFDN1-201ENST00000261813 TRPV4Q9HBA0 871 aa12.13□□□□□ -0.47
PFDN1-201ENST00000261813 CNGB3Q9NQW8 809 aa12.13□□□□□ -0.47
PFDN1-201ENST00000261813 TLR8Q9NR97 1041 aaKnown RBP12.13□□□□□ -0.47
PFDN1-201ENST00000261813 ST7Q9NRC1 585 aa12.13□□□□□ -0.47
PFDN1-201ENST00000261813 ADAMTS1Q9UHI8 967 aa12.13□□□□□ -0.47
PFDN1-201ENST00000261813 ZMYM5Q9UJ78 669 aa12.13□□□□□ -0.47
PFDN1-201ENST00000261813 INTUQ9ULD6 942 aa12.13□□□□□ -0.47
PFDN1-201ENST00000261813 ANAPC1Q9H1A4 1944 aa12.12□□□□□ -0.47
PFDN1-201ENST00000261813 TRAV19A0A0A6YYK7 116 aa12.12□□□□□ -0.47
PFDN1-201ENST00000261813 COCHO43405 550 aa12.12□□□□□ -0.47
PFDN1-201ENST00000261813 ECI2O75521 394 aa12.12□□□□□ -0.47
PFDN1-201ENST00000261813 LSM8O95777 96 aaKnown RBP12.12□□□□□ -0.47
PFDN1-201ENST00000261813 TUBB4AP04350 444 aa12.12□□□□□ -0.47
PFDN1-201ENST00000261813 CYP1A1P04798 512 aaPredicted RBP12.12□□□□□ -0.47
PFDN1-201ENST00000261813 ACADSBP45954 432 aa12.12□□□□□ -0.47
PFDN1-201ENST00000261813 TUBP50607 506 aa12.12□□□□□ -0.47
PFDN1-201ENST00000261813 GUCA2AQ02747 115 aa12.12□□□□□ -0.47
PFDN1-201ENST00000261813 HECTD3Q5T447 861 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms