RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 TGM2P21980 687 aa16.71■□□□□ 0.27
SREBF1-201ENST00000261646 HMGCS2P54868 508 aa16.71■□□□□ 0.27
SREBF1-201ENST00000261646 NR1H2P55055 460 aa16.71■□□□□ 0.27
SREBF1-201ENST00000261646 SPDYAQ5MJ70 313 aa16.71■□□□□ 0.27
SREBF1-201ENST00000261646 RTKN2Q8IZC4 609 aa16.71■□□□□ 0.27
SREBF1-201ENST00000261646 TSPAN14Q8NG11 270 aa16.71■□□□□ 0.27
SREBF1-201ENST00000261646 C10orf82Q8WW14 230 aa16.71■□□□□ 0.27
SREBF1-201ENST00000261646 EML4Q9HC35 981 aaKnown RBP16.71■□□□□ 0.27
SREBF1-201ENST00000261646 PLA2G4CQ9UP65 541 aa16.71■□□□□ 0.27
SREBF1-201ENST00000261646 AK5Q9Y6K8 562 aa16.71■□□□□ 0.27
SREBF1-201ENST00000261646 C21orf59P57076 290 aa16.71■□□□□ 0.27
SREBF1-201ENST00000261646 SLC9A9Q8IVB4 645 aa16.71■□□□□ 0.27
SREBF1-201ENST00000261646 DNAJC1Q96KC8 554 aaKnown RBP16.71■□□□□ 0.27
SREBF1-201ENST00000261646 SEPT3Q9UH03 358 aa16.71■□□□□ 0.27
SREBF1-201ENST00000261646 SNX9Q9Y5X1 595 aa16.71■□□□□ 0.27
SREBF1-201ENST00000261646 H0Y626 953 aa16.71■□□□□ 0.27
SREBF1-201ENST00000261646 TRIM16O95361 564 aa16.71■□□□□ 0.27
SREBF1-201ENST00000261646 KRT75O95678 551 aa16.71■□□□□ 0.27
SREBF1-201ENST00000261646 SERPINB10P48595 397 aa16.71■□□□□ 0.27
SREBF1-201ENST00000261646 ZFP1Q6P2D0 407 aa16.71■□□□□ 0.27
SREBF1-201ENST00000261646 AAGABQ6PD74 315 aa16.71■□□□□ 0.27
SREBF1-201ENST00000261646 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.71■□□□□ 0.273e-6■■□□□ 13.2
SREBF1-201ENST00000261646 STRA8Q7Z7C7 330 aa16.71■□□□□ 0.27
SREBF1-201ENST00000261646 USP33Q8TEY7 942 aa16.71■□□□□ 0.27
SREBF1-201ENST00000261646 TUBGCP5Q96RT8 1024 aa16.71■□□□□ 0.27
SREBF1-201ENST00000261646 HSD17B14Q9BPX1 270 aa16.71■□□□□ 0.27
SREBF1-201ENST00000261646 SORCS3Q9UPU3 1222 aa16.71■□□□□ 0.27
SREBF1-201ENST00000261646 F8W8V4 182 aa16.7■□□□□ 0.26
SREBF1-201ENST00000261646 SERPINB1P30740 379 aa16.7■□□□□ 0.26
SREBF1-201ENST00000261646 AVPR1AP37288 418 aa16.7■□□□□ 0.26
SREBF1-201ENST00000261646 PTGER2P43116 358 aa16.7■□□□□ 0.26
SREBF1-201ENST00000261646 MPP2Q14168 576 aa16.7■□□□□ 0.26
SREBF1-201ENST00000261646 NEDD8Q15843 81 aa16.7■□□□□ 0.26
SREBF1-201ENST00000261646 BHLHE22Q8NFJ8 381 aaPredicted RBP16.7■□□□□ 0.26
SREBF1-201ENST00000261646 RXFP2Q8WXD0 754 aa16.7■□□□□ 0.26
SREBF1-201ENST00000261646 SIK2Q9H0K1 926 aa16.7■□□□□ 0.26
SREBF1-201ENST00000261646 RPAP3Q9H6T3 665 aaPredicted RBP16.7■□□□□ 0.26
SREBF1-201ENST00000261646 S100A14Q9HCY8 104 aa16.7■□□□□ 0.26
SREBF1-201ENST00000261646 ZNF70Q9UC06 446 aaPredicted RBP16.7■□□□□ 0.26
SREBF1-201ENST00000261646 LYPLA1O75608 230 aaPredicted RBP16.7■□□□□ 0.26
SREBF1-201ENST00000261646 SERPINA6P08185 405 aa16.7■□□□□ 0.26
SREBF1-201ENST00000261646 NSUN2Q08J23 767 aaKnown RBP eCLIP16.7■□□□□ 0.26
SREBF1-201ENST00000261646 AGKQ53H12 422 aa16.7■□□□□ 0.26
SREBF1-201ENST00000261646 TLDC1Q6P9B6 456 aa16.7■□□□□ 0.26
SREBF1-201ENST00000261646 CES3Q6UWW8 571 aa16.7■□□□□ 0.26
SREBF1-201ENST00000261646 SEMA4DQ92854 862 aa16.7■□□□□ 0.26
SREBF1-201ENST00000261646 VPS50Q96JG6 964 aa16.7■□□□□ 0.26
SREBF1-201ENST00000261646 APOL2Q9BQE5 337 aa16.7■□□□□ 0.26
SREBF1-201ENST00000261646 UNKQ9C0B0 810 aaKnown RBP16.7■□□□□ 0.26
SREBF1-201ENST00000261646 ZNF518BQ9C0D4 1074 aa16.7■□□□□ 0.26
SREBF1-201ENST00000261646 EBF3Q9H4W6 596 aa16.7■□□□□ 0.26
SREBF1-201ENST00000261646 XPOTO43592 962 aaKnown RBP16.7■□□□□ 0.26
SREBF1-201ENST00000261646 AVILO75366 819 aa16.7■□□□□ 0.26
SREBF1-201ENST00000261646 ELMO2Q96JJ3 720 aa16.7■□□□□ 0.26
SREBF1-201ENST00000261646 ROBO3Q96MS0 1386 aa16.7■□□□□ 0.26
SREBF1-201ENST00000261646 CYP3A7-CYP3A51PA0A087WV96 503 aa16.7■□□□□ 0.26
SREBF1-201ENST00000261646 ATP6V1G1O75348 118 aa16.7■□□□□ 0.26
SREBF1-201ENST00000261646 KRT8P05787 483 aa16.7■□□□□ 0.26
SREBF1-201ENST00000261646 CYP3A7P24462 503 aa16.7■□□□□ 0.26
SREBF1-201ENST00000261646 CNTFP26441 200 aa16.7■□□□□ 0.26
SREBF1-201ENST00000261646 STAT5BP51692 787 aa16.7■□□□□ 0.26
SREBF1-201ENST00000261646 NME5P56597 212 aa16.7■□□□□ 0.26
SREBF1-201ENST00000261646 CDC16Q13042 620 aa16.7■□□□□ 0.26
SREBF1-201ENST00000261646 UGP2Q16851 508 aa16.7■□□□□ 0.26
SREBF1-201ENST00000261646 C4orf22Q6V702 233 aa16.7■□□□□ 0.26
SREBF1-201ENST00000261646 SATL1Q86VE3 508 aa16.7■□□□□ 0.26
SREBF1-201ENST00000261646 HPS6Q86YV9 775 aa16.7■□□□□ 0.26
SREBF1-201ENST00000261646 SPATA16Q9BXB7 569 aa16.7■□□□□ 0.26
SREBF1-201ENST00000261646 TRIM13O60858 407 aa16.69■□□□□ 0.26
SREBF1-201ENST00000261646 ZNF23P17027 643 aa16.69■□□□□ 0.26
SREBF1-201ENST00000261646 DGKDQ16760 1214 aa16.69■□□□□ 0.26
SREBF1-201ENST00000261646 CEP41Q9BYV8 373 aa16.69■□□□□ 0.26
SREBF1-201ENST00000261646 C2orf40Q9H1Z8 148 aa16.69■□□□□ 0.26
SREBF1-201ENST00000261646 PRKAG3Q9UGI9 489 aa16.69■□□□□ 0.26
SREBF1-201ENST00000261646 BLOC1S6Q9UL45 172 aa16.69■□□□□ 0.26
SREBF1-201ENST00000261646 APOC4-APOC2K7ER74 178 aa16.69■□□□□ 0.26
SREBF1-201ENST00000261646 ADCY6O43306 1168 aa16.69■□□□□ 0.26
SREBF1-201ENST00000261646 MAGEC1O60732 1142 aa16.69■□□□□ 0.26
SREBF1-201ENST00000261646 LSM8O95777 96 aaKnown RBP16.69■□□□□ 0.26
SREBF1-201ENST00000261646 APOA1P02647 267 aa16.69■□□□□ 0.26
SREBF1-201ENST00000261646 APOC2P02655 101 aa16.69■□□□□ 0.26
SREBF1-201ENST00000261646 GFAPP14136 432 aa16.69■□□□□ 0.26
SREBF1-201ENST00000261646 RBL1P28749 1068 aa16.69■□□□□ 0.26
SREBF1-201ENST00000261646 MIPP30301 263 aa16.69■□□□□ 0.26
SREBF1-201ENST00000261646 TM4SF1P30408 202 aa16.69■□□□□ 0.26
SREBF1-201ENST00000261646 NEK3P51956 506 aa16.69■□□□□ 0.26
SREBF1-201ENST00000261646 ARHGDIAP52565 204 aa16.69■□□□□ 0.26
SREBF1-201ENST00000261646 PDCD6IPQ8WUM4 868 aaKnown RBP16.69■□□□□ 0.26
SREBF1-201ENST00000261646 TFB1MQ8WVM0 346 aaKnown RBP16.69■□□□□ 0.26
SREBF1-201ENST00000261646 KIF12Q96FN5 646 aa16.69■□□□□ 0.26
SREBF1-201ENST00000261646 CNPY3Q9BT09 278 aa16.69■□□□□ 0.26
SREBF1-201ENST00000261646 NACA2Q9H009 215 aa16.69■□□□□ 0.26
SREBF1-201ENST00000261646 CYP4F12Q9HCS2 524 aa16.69■□□□□ 0.26
SREBF1-201ENST00000261646 C3orf70A6NLC5 250 aaPredicted RBP16.69■□□□□ 0.26
SREBF1-201ENST00000261646 PFDN6O15212 129 aa16.69■□□□□ 0.26
SREBF1-201ENST00000261646 MAPTP10636 758 aaKnown RBP16.69■□□□□ 0.26
SREBF1-201ENST00000261646 PSMA4P25789 261 aaKnown RBP16.69■□□□□ 0.26
SREBF1-201ENST00000261646 PEX2P28328 305 aa16.69■□□□□ 0.26
SREBF1-201ENST00000261646 C6orf10Q5SRN2 563 aa16.69■□□□□ 0.26
SREBF1-201ENST00000261646 KYAT3Q6YP21 454 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms