RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 NCAM1P13591 858 aa23.28■■□□□ 1.32
SIX3-201ENST00000260653 GRIK1P39086 918 aa23.28■■□□□ 1.32
SIX3-201ENST00000260653 LRRC26Q2I0M4 334 aa23.28■■□□□ 1.32
SIX3-201ENST00000260653 IQCKQ8N0W5 287 aa23.28■■□□□ 1.32
SIX3-201ENST00000260653 PQLC3Q8N755 202 aa23.28■■□□□ 1.32
SIX3-201ENST00000260653 DNAJC5GQ8N7S2 189 aa23.28■■□□□ 1.32
SIX3-201ENST00000260653 CCDC89Q8N998 374 aa23.28■■□□□ 1.32
SIX3-201ENST00000260653 PCDH19Q8TAB3 1148 aa23.28■■□□□ 1.32
SIX3-201ENST00000260653 SLC7A14Q8TBB6 771 aa23.28■■□□□ 1.32
SIX3-201ENST00000260653 FAM71BQ8TC56 605 aa23.28■■□□□ 1.32
SIX3-201ENST00000260653 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.28■■□□□ 1.32
SIX3-201ENST00000260653 EDEM1Q92611 657 aa23.28■■□□□ 1.32
SIX3-201ENST00000260653 PNPLA8Q9NP80 782 aa23.28■■□□□ 1.32
SIX3-201ENST00000260653 TMPRSS4Q9NRS4 437 aa23.28■■□□□ 1.32
SIX3-201ENST00000260653 PIGVQ9NUD9 493 aa23.28■■□□□ 1.32
SIX3-201ENST00000260653 ZSCAN5DPP0CG00 497 aa23.27■■□□□ 1.32
SIX3-201ENST00000260653 HSPA8P11142 646 aaKnown RBP23.27■■□□□ 1.32
SIX3-201ENST00000260653 ETS1P14921 441 aa23.27■■□□□ 1.32
SIX3-201ENST00000260653 TFDP2Q14188 446 aa23.27■■□□□ 1.32
SIX3-201ENST00000260653 CTXN3Q4LDR2 81 aa23.27■■□□□ 1.32
SIX3-201ENST00000260653 CFAP58Q5T655 872 aa23.27■■□□□ 1.32
SIX3-201ENST00000260653 FUT10Q6P4F1 479 aa23.27■■□□□ 1.32
SIX3-201ENST00000260653 LRRC43Q8N309 656 aa23.27■■□□□ 1.32
SIX3-201ENST00000260653 KCTD15Q96SI1 283 aaPredicted RBP23.27■■□□□ 1.32
SIX3-201ENST00000260653 ZNF670Q9BS34 389 aa23.27■■□□□ 1.32
SIX3-201ENST00000260653 ATP8A1Q9Y2Q0 1164 aa23.27■■□□□ 1.32
SIX3-201ENST00000260653 SF3B1O75533 1304 aaKnown RBP eCLIP23.27■■□□□ 1.32
SIX3-201ENST00000260653 RDXP35241 583 aaKnown RBP23.27■■□□□ 1.32
SIX3-201ENST00000260653 IFRD2Q12894 506 aaPredicted RBP23.27■■□□□ 1.32
SIX3-201ENST00000260653 ALS2CLQ60I27 953 aa23.27■■□□□ 1.32
SIX3-201ENST00000260653 PM20D1Q6GTS8 502 aa23.27■■□□□ 1.32
SIX3-201ENST00000260653 CNKSR3Q6P9H4 555 aa23.27■■□□□ 1.32
SIX3-201ENST00000260653 DCP1BQ8IZD4 617 aaKnown RBP23.27■■□□□ 1.32
SIX3-201ENST00000260653 PYROXD2Q8N2H3 581 aa23.27■■□□□ 1.32
SIX3-201ENST00000260653 BCL7CQ8WUZ0 217 aaPredicted RBP23.27■■□□□ 1.32
SIX3-201ENST00000260653 TXLNGYQ9BZA5 131 aa23.27■■□□□ 1.32
SIX3-201ENST00000260653 PRDM10Q9NQV6 1147 aa23.27■■□□□ 1.32
SIX3-201ENST00000260653 SGK1O00141 431 aa23.26■■□□□ 1.31
SIX3-201ENST00000260653 PPFIA2O75334 1257 aa23.26■■□□□ 1.31
SIX3-201ENST00000260653 ITGA8P53708 1063 aa23.26■■□□□ 1.31
SIX3-201ENST00000260653 SLC5A3P53794 718 aa23.26■■□□□ 1.31
SIX3-201ENST00000260653 DEUP1Q05D60 604 aa23.26■■□□□ 1.31
SIX3-201ENST00000260653 IKBKEQ14164 716 aa23.26■■□□□ 1.31
SIX3-201ENST00000260653 MRPL58Q14197 206 aaKnown RBP23.26■■□□□ 1.31
SIX3-201ENST00000260653 HSP90B2PQ58FF3 399 aa23.26■■□□□ 1.31
SIX3-201ENST00000260653 PLD5Q8N7P1 536 aa23.26■■□□□ 1.31
SIX3-201ENST00000260653 FAF2Q96CS3 445 aa23.26■■□□□ 1.31
SIX3-201ENST00000260653 PGLYRP2Q96PD5 576 aa23.26■■□□□ 1.31
SIX3-201ENST00000260653 FRMD8P1Q9BZ68 369 aaPredicted RBP23.26■■□□□ 1.31
SIX3-201ENST00000260653 C11orf49Q9H6J7 331 aa23.26■■□□□ 1.31
SIX3-201ENST00000260653 MTRF1LQ9UGC7 380 aaKnown RBP23.26■■□□□ 1.31
SIX3-201ENST00000260653 FZD10Q9ULW2 581 aa23.26■■□□□ 1.31
SIX3-201ENST00000260653 USP3Q9Y6I4 520 aa23.26■■□□□ 1.31
SIX3-201ENST00000260653 ITIH2P19823 946 aa23.26■■□□□ 1.31
SIX3-201ENST00000260653 FGFR3P22607 806 aa23.26■■□□□ 1.31
SIX3-201ENST00000260653 GDF10P55107 478 aa23.26■■□□□ 1.31
SIX3-201ENST00000260653 EIF3EP60228 445 aaKnown RBP23.26■■□□□ 1.31
SIX3-201ENST00000260653 C1orf228Q6PIY5 440 aa23.26■■□□□ 1.31
SIX3-201ENST00000260653 VSIG1Q86XK7 387 aa23.26■■□□□ 1.31
SIX3-201ENST00000260653 SCN4BQ8IWT1 228 aa23.26■■□□□ 1.31
SIX3-201ENST00000260653 UBLCP1Q8WVY7 318 aaPredicted RBP23.26■■□□□ 1.31
SIX3-201ENST00000260653 MED4Q9NPJ6 270 aa23.26■■□□□ 1.31
SIX3-201ENST00000260653 IFNB1P01574 187 aa23.25■■□□□ 1.31
SIX3-201ENST00000260653 ITGB8P26012 769 aa23.25■■□□□ 1.31
SIX3-201ENST00000260653 ZNF280DQ6N043 979 aa23.25■■□□□ 1.31
SIX3-201ENST00000260653 STKLD1Q8NE28 680 aa23.25■■□□□ 1.31
SIX3-201ENST00000260653 IRGQQ8WZA9 623 aa23.25■■□□□ 1.31
SIX3-201ENST00000260653 P3H4Q92791 437 aa23.25■■□□□ 1.31
SIX3-201ENST00000260653 TMEM175Q9BSA9 504 aa23.25■■□□□ 1.31
SIX3-201ENST00000260653 TNFRSF10BO14763 440 aa23.25■■□□□ 1.31
SIX3-201ENST00000260653 APOL1O14791 398 aa23.25■■□□□ 1.31
SIX3-201ENST00000260653 MCF2LO15068 1137 aa23.25■■□□□ 1.31
SIX3-201ENST00000260653 POLR3GO15318 223 aaPredicted RBP23.25■■□□□ 1.31
SIX3-201ENST00000260653 NOMO1Q15155 1222 aa23.25■■□□□ 1.31
SIX3-201ENST00000260653 P3H1Q32P28 736 aa23.25■■□□□ 1.31
SIX3-201ENST00000260653 RTP2Q5QGT7 225 aa23.25■■□□□ 1.31
SIX3-201ENST00000260653 BSPRYQ5W0U4 402 aa23.25■■□□□ 1.31
SIX3-201ENST00000260653 SLC9A4Q6AI14 798 aa23.25■■□□□ 1.31
SIX3-201ENST00000260653 B4GALNT4Q76KP1 1039 aa23.25■■□□□ 1.31
SIX3-201ENST00000260653 ANKLE1Q8NAG6 615 aa23.25■■□□□ 1.31
SIX3-201ENST00000260653 FAM129AQ9BZQ8 928 aa23.25■■□□□ 1.31
SIX3-201ENST00000260653 PLAAQ9Y263 795 aa23.25■■□□□ 1.31
SIX3-201ENST00000260653 RHBDF2Q6PJF5 856 aa23.24■■□□□ 1.31
SIX3-201ENST00000260653 ZC3H18Q86VM9 953 aaKnown RBP23.24■■□□□ 1.31
SIX3-201ENST00000260653 SCML4Q8N228 414 aa23.24■■□□□ 1.31
SIX3-201ENST00000260653 RUFY1Q96T51 708 aa23.24■■□□□ 1.31
SIX3-201ENST00000260653 RBP3P10745 1247 aa23.24■■□□□ 1.31
SIX3-201ENST00000260653 NFE2Q16621 373 aaPredicted RBP23.24■■□□□ 1.31
SIX3-201ENST00000260653 SDHAF4Q5VUM1 108 aa23.24■■□□□ 1.31
SIX3-201ENST00000260653 TAS1R1Q7RTX1 841 aa23.24■■□□□ 1.31
SIX3-201ENST00000260653 TTC9BQ8N6N2 239 aa23.24■■□□□ 1.31
SIX3-201ENST00000260653 CSPG4P5Q96PW8 444 aa23.24■■□□□ 1.31
SIX3-201ENST00000260653 WDR6Q9NNW5 1121 aaKnown RBP23.24■■□□□ 1.31
SIX3-201ENST00000260653 HEY1Q9Y5J3 304 aa23.24■■□□□ 1.31
SIX3-201ENST00000260653 ZNF487B1APH4 448 aa23.23■■□□□ 1.31
SIX3-201ENST00000260653 GPR15P49685 360 aa23.23■■□□□ 1.31
SIX3-201ENST00000260653 LBX1P52954 281 aa23.23■■□□□ 1.31
SIX3-201ENST00000260653 ARPP19P56211 112 aa23.23■■□□□ 1.31
SIX3-201ENST00000260653 C1QTNF8P60827 252 aa23.23■■□□□ 1.31
SIX3-201ENST00000260653 IZUMO3Q5VZ72 239 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms