RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 HADHBP55084 474 aaKnown RBP16.52■□□□□ 0.23
CCDC90B-201ENST00000260054 ITIH3Q06033 890 aa16.52■□□□□ 0.23
CCDC90B-201ENST00000260054 CCDC14Q49A88 953 aa16.52■□□□□ 0.23
CCDC90B-201ENST00000260054 STXBP5Q5T5C0 1151 aa16.52■□□□□ 0.23
CCDC90B-201ENST00000260054 FNIP1Q8TF40 1166 aa16.52■□□□□ 0.23
CCDC90B-201ENST00000260054 UBE2Q2Q8WVN8 375 aa16.52■□□□□ 0.23
CCDC90B-201ENST00000260054 PPM1EQ8WY54 764 aa16.52■□□□□ 0.23
CCDC90B-201ENST00000260054 KCND1Q9NSA2 647 aa16.52■□□□□ 0.23
CCDC90B-201ENST00000260054 OBSL1O75147 1896 aa16.52■□□□□ 0.23
CCDC90B-201ENST00000260054 ANAPC1Q9H1A4 1944 aa16.51■□□□□ 0.23
CCDC90B-201ENST00000260054 DPYSL4O14531 572 aa16.51■□□□□ 0.23
CCDC90B-201ENST00000260054 MOCS3O95396 460 aa16.51■□□□□ 0.23
CCDC90B-201ENST00000260054 OAS1P00973 400 aaKnown RBP16.51■□□□□ 0.23
CCDC90B-201ENST00000260054 RALAP11233 206 aa16.51■□□□□ 0.23
CCDC90B-201ENST00000260054 SDC4P31431 198 aa16.51■□□□□ 0.23
CCDC90B-201ENST00000260054 TUBP50607 506 aa16.51■□□□□ 0.23
CCDC90B-201ENST00000260054 ZNF143P52747 638 aaPredicted RBP16.51■□□□□ 0.23
CCDC90B-201ENST00000260054 NAP1L1P55209 391 aaKnown RBP16.51■□□□□ 0.23
CCDC90B-201ENST00000260054 TEAD2Q15562 447 aa16.51■□□□□ 0.23
CCDC90B-201ENST00000260054 CLUL1Q15846 466 aa16.51■□□□□ 0.23
CCDC90B-201ENST00000260054 C15orf59Q2T9L4 293 aaPredicted RBP16.51■□□□□ 0.23
CCDC90B-201ENST00000260054 HECTD3Q5T447 861 aa16.51■□□□□ 0.23
CCDC90B-201ENST00000260054 SH3PXD2AQ5TCZ1 1133 aa16.51■□□□□ 0.23
CCDC90B-201ENST00000260054 OTUD1Q5VV17 481 aaPredicted RBP16.51■□□□□ 0.23
CCDC90B-201ENST00000260054 TXNDC8Q6A555 127 aa16.51■□□□□ 0.23
CCDC90B-201ENST00000260054 RSRC2Q7L4I2 434 aaKnown RBP16.51■□□□□ 0.23
CCDC90B-201ENST00000260054 ADAM32Q8TC27 787 aa16.51■□□□□ 0.23
CCDC90B-201ENST00000260054 DQX1Q8TE96 717 aaKnown RBP16.51■□□□□ 0.23
CCDC90B-201ENST00000260054 MRPS31Q92665 395 aaKnown RBP16.51■□□□□ 0.23
CCDC90B-201ENST00000260054 NT5C3BQ969T7 300 aa16.51■□□□□ 0.23
CCDC90B-201ENST00000260054 GCNAQ96QF7 691 aa16.51■□□□□ 0.23
CCDC90B-201ENST00000260054 NPY6RQ99463 290 aa16.51■□□□□ 0.23
CCDC90B-201ENST00000260054 CALCOCO1Q9P1Z2 691 aa16.51■□□□□ 0.23
CCDC90B-201ENST00000260054 MYO1FO00160 1098 aa16.5■□□□□ 0.23
CCDC90B-201ENST00000260054 MDM4O15151 490 aa16.5■□□□□ 0.23
CCDC90B-201ENST00000260054 CCP110O43303 1012 aa16.5■□□□□ 0.23
CCDC90B-201ENST00000260054 COCHO43405 550 aa16.5■□□□□ 0.23
CCDC90B-201ENST00000260054 BUB1BO60566 1050 aaPredicted RBP16.5■□□□□ 0.23
CCDC90B-201ENST00000260054 PSMA2P25787 234 aa16.5■□□□□ 0.23
CCDC90B-201ENST00000260054 PTPN9P43378 593 aa16.5■□□□□ 0.23
CCDC90B-201ENST00000260054 ATP11AP98196 1134 aa16.5■□□□□ 0.23
CCDC90B-201ENST00000260054 SLC25A52Q3SY17 297 aa16.5■□□□□ 0.23
CCDC90B-201ENST00000260054 RAB6CQ53S08 254 aa16.5■□□□□ 0.23
CCDC90B-201ENST00000260054 C10orf120Q5SQS8 335 aa16.5■□□□□ 0.23
CCDC90B-201ENST00000260054 CES5AQ6NT32 575 aa16.5■□□□□ 0.23
CCDC90B-201ENST00000260054 MSANTD2Q6P1R3 559 aa16.5■□□□□ 0.23
CCDC90B-201ENST00000260054 TAC4Q86UU9 113 aa16.5■□□□□ 0.23
CCDC90B-201ENST00000260054 ZNF276Q8N554 614 aa16.5■□□□□ 0.23
CCDC90B-201ENST00000260054 SMRP1Q8NCR6 262 aa16.5■□□□□ 0.23
CCDC90B-201ENST00000260054 TPCN2Q8NHX9 752 aa16.5■□□□□ 0.23
CCDC90B-201ENST00000260054 ITFG1Q8TB96 612 aa16.5■□□□□ 0.23
CCDC90B-201ENST00000260054 RNF139Q8WU17 664 aa16.5■□□□□ 0.23
CCDC90B-201ENST00000260054 SLC22A12Q96S37 553 aa16.5■□□□□ 0.23
CCDC90B-201ENST00000260054 TBCBQ99426 244 aa16.5■□□□□ 0.23
CCDC90B-201ENST00000260054 RNF38Q9H0F5 515 aa16.5■□□□□ 0.23
CCDC90B-201ENST00000260054 RAB6CQ9H0N0 254 aa16.5■□□□□ 0.23
CCDC90B-201ENST00000260054 TRPC7Q9HCX4 862 aa16.5■□□□□ 0.23
CCDC90B-201ENST00000260054 WDR6Q9NNW5 1121 aaKnown RBP16.5■□□□□ 0.23
CCDC90B-201ENST00000260054 SFMBT1Q9UHJ3 866 aa16.5■□□□□ 0.23
CCDC90B-201ENST00000260054 STAP1Q9ULZ2 295 aa16.5■□□□□ 0.23
CCDC90B-201ENST00000260054 MRPS23Q9Y3D9 190 aaKnown RBP16.5■□□□□ 0.23
CCDC90B-201ENST00000260054 CAPN6Q9Y6Q1 641 aa16.5■□□□□ 0.23
CCDC90B-201ENST00000260054 SPTBN5Q9NRC6 3674 aaKnown RBP16.5■□□□□ 0.23
CCDC90B-201ENST00000260054 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.5■□□□□ 0.23
CCDC90B-201ENST00000260054 H3BQ06 376 aaPredicted RBP16.5■□□□□ 0.23
CCDC90B-201ENST00000260054 ZNF197O14709 1029 aa16.5■□□□□ 0.23
CCDC90B-201ENST00000260054 CEBPBP17676 345 aa16.5■□□□□ 0.23
CCDC90B-201ENST00000260054 SULT1E1P49888 294 aa16.5■□□□□ 0.23
CCDC90B-201ENST00000260054 MESDQ14696 234 aa16.5■□□□□ 0.23
CCDC90B-201ENST00000260054 SKIV2LQ15477 1246 aaKnown RBP16.5■□□□□ 0.23
CCDC90B-201ENST00000260054 POTEHQ6S545 545 aa16.5■□□□□ 0.23
CCDC90B-201ENST00000260054 BNIPLQ7Z465 357 aa16.5■□□□□ 0.23
CCDC90B-201ENST00000260054 CPNE8Q86YQ8 564 aa16.5■□□□□ 0.23
CCDC90B-201ENST00000260054 RNF10Q8N5U6 811 aaKnown RBP16.5■□□□□ 0.23
CCDC90B-201ENST00000260054 MAB21L3Q8N8X9 362 aa16.5■□□□□ 0.23
CCDC90B-201ENST00000260054 ING5Q8WYH8 240 aa16.5■□□□□ 0.23
CCDC90B-201ENST00000260054 CYP2S1Q96SQ9 504 aa16.5■□□□□ 0.23
CCDC90B-201ENST00000260054 CNPY3Q9BT09 278 aa16.5■□□□□ 0.23
CCDC90B-201ENST00000260054 IRX2Q9BZI1 471 aaPredicted RBP16.5■□□□□ 0.23
CCDC90B-201ENST00000260054 SMOC2Q9H3U7 446 aa16.5■□□□□ 0.23
CCDC90B-201ENST00000260054 GOLPH3Q9H4A6 298 aa16.5■□□□□ 0.23
CCDC90B-201ENST00000260054 UBE2ZQ9H832 354 aaPredicted RBP16.5■□□□□ 0.23
CCDC90B-201ENST00000260054 OLA1Q9NTK5 396 aaKnown RBP16.5■□□□□ 0.23
CCDC90B-201ENST00000260054 IP6K2Q9UHH9 426 aa16.5■□□□□ 0.23
CCDC90B-201ENST00000260054 DENND4CQ5VZ89 1909 aa16.49■□□□□ 0.23
CCDC90B-201ENST00000260054 C5orf42Q9H799 3197 aa16.49■□□□□ 0.23
CCDC90B-201ENST00000260054 CLUHO75153 1309 aa16.49■□□□□ 0.23
CCDC90B-201ENST00000260054 GRID2IPA4D2P6 1211 aa16.49■□□□□ 0.23
CCDC90B-201ENST00000260054 TMEM110-MUSTN1A8MSY1 372 aa16.49■□□□□ 0.23
CCDC90B-201ENST00000260054 M0QYT0 321 aa16.49■□□□□ 0.23
CCDC90B-201ENST00000260054 OLFM2O95897 454 aa16.49■□□□□ 0.23
CCDC90B-201ENST00000260054 TRUB2O95900 331 aaKnown RBP16.49■□□□□ 0.23
CCDC90B-201ENST00000260054 IGLV3-25P01717 112 aa16.49■□□□□ 0.23
CCDC90B-201ENST00000260054 ATXN1P54253 815 aaKnown RBP16.49■□□□□ 0.23
CCDC90B-201ENST00000260054 EFEMP1Q12805 493 aa16.49■□□□□ 0.23
CCDC90B-201ENST00000260054 CDO1Q16878 200 aa16.49■□□□□ 0.23
CCDC90B-201ENST00000260054 ATAT1Q5SQI0 421 aa16.49■□□□□ 0.23
CCDC90B-201ENST00000260054 GPR158Q5T848 1215 aa16.49■□□□□ 0.23
CCDC90B-201ENST00000260054 DAB2IPQ5VWQ8 1189 aa16.49■□□□□ 0.23
CCDC90B-201ENST00000260054 KLHDC10Q6PID8 442 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms