RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 TMEM63AO94886 807 aa15.21■□□□□ 0.03
TRAFD1-201ENST00000257604 AGTP01019 485 aa15.21■□□□□ 0.03
TRAFD1-201ENST00000257604 ASGR1P07306 291 aa15.21■□□□□ 0.03
TRAFD1-201ENST00000257604 F7P08709 466 aaPredicted RBP15.21■□□□□ 0.03
TRAFD1-201ENST00000257604 GOT1P17174 413 aa15.21■□□□□ 0.03
TRAFD1-201ENST00000257604 SLC8A3P57103 927 aa15.21■□□□□ 0.03
TRAFD1-201ENST00000257604 DPYSL3Q14195 570 aa15.21■□□□□ 0.03
TRAFD1-201ENST00000257604 ITIH4Q14624 930 aa15.21■□□□□ 0.03
TRAFD1-201ENST00000257604 RHBDF2Q6PJF5 856 aa15.21■□□□□ 0.03
TRAFD1-201ENST00000257604 MAP7D3Q8IWC1 876 aa15.21■□□□□ 0.03
TRAFD1-201ENST00000257604 APBA2Q99767 749 aa15.21■□□□□ 0.03
TRAFD1-201ENST00000257604 TSPYL2Q9H2G4 693 aaPredicted RBP15.21■□□□□ 0.03
TRAFD1-201ENST00000257604 ETNK2Q9NVF9 386 aa15.21■□□□□ 0.03
TRAFD1-201ENST00000257604 C15orf41Q9Y2V0 281 aa15.21■□□□□ 0.03
TRAFD1-201ENST00000257604 M0QYT0 321 aa15.21■□□□□ 0.03
TRAFD1-201ENST00000257604 PDHA1P08559 390 aa15.21■□□□□ 0.03
TRAFD1-201ENST00000257604 USP17L7P0C7H9 530 aa15.21■□□□□ 0.03
TRAFD1-201ENST00000257604 GNAT1P11488 350 aa15.21■□□□□ 0.03
TRAFD1-201ENST00000257604 CRYMQ14894 314 aa15.21■□□□□ 0.03
TRAFD1-201ENST00000257604 OASLQ15646 514 aaKnown RBP15.21■□□□□ 0.03
TRAFD1-201ENST00000257604 SEPT7Q16181 437 aaKnown RBP15.21■□□□□ 0.03
TRAFD1-201ENST00000257604 UBXN11Q5T124 520 aa15.21■□□□□ 0.03
TRAFD1-201ENST00000257604 OLFML1Q6UWY5 402 aa15.21■□□□□ 0.03
TRAFD1-201ENST00000257604 C17orf99Q6UX52 265 aa15.21■□□□□ 0.03
TRAFD1-201ENST00000257604 B3GALNT2Q8NCR0 500 aa15.21■□□□□ 0.03
TRAFD1-201ENST00000257604 CPT1BQ92523 772 aa15.21■□□□□ 0.03
TRAFD1-201ENST00000257604 SENP8Q96LD8 212 aa15.21■□□□□ 0.03
TRAFD1-201ENST00000257604 AGAP3Q96P47 875 aa15.21■□□□□ 0.03
TRAFD1-201ENST00000257604 NSRP1Q9H0G5 558 aaKnown RBP15.21■□□□□ 0.03
TRAFD1-201ENST00000257604 XPNPEP3Q9NQH7 507 aa15.21■□□□□ 0.03
TRAFD1-201ENST00000257604 SLC45A1Q9Y2W3 748 aa15.21■□□□□ 0.03
TRAFD1-201ENST00000257604 USP15Q9Y4E8 981 aaPredicted RBP15.21■□□□□ 0.03
TRAFD1-201ENST00000257604 SNX10Q9Y5X0 201 aa15.21■□□□□ 0.03
TRAFD1-201ENST00000257604 LOC285556D6RIA3 1793 aa15.21■□□□□ 0.03
TRAFD1-201ENST00000257604 A0A1W2PPM1 405 aa15.2■□□□□ 0.02
TRAFD1-201ENST00000257604 PTGESO14684 152 aa15.2■□□□□ 0.02
TRAFD1-201ENST00000257604 ARPP19P56211 112 aa15.2■□□□□ 0.02
TRAFD1-201ENST00000257604 HDAC4P56524 1084 aa15.2■□□□□ 0.02
TRAFD1-201ENST00000257604 MPP2Q14168 576 aa15.2■□□□□ 0.02
TRAFD1-201ENST00000257604 SYPL2Q5VXT5 272 aa15.2■□□□□ 0.02
TRAFD1-201ENST00000257604 IFNLR1Q8IU57 520 aaPredicted RBP15.2■□□□□ 0.02
TRAFD1-201ENST00000257604 TP53INP2Q8IXH6 220 aa15.2■□□□□ 0.02
TRAFD1-201ENST00000257604 FITM2Q8N6M3 262 aa15.2■□□□□ 0.02
TRAFD1-201ENST00000257604 SLC7A14Q8TBB6 771 aa15.2■□□□□ 0.02
TRAFD1-201ENST00000257604 MAGEC3Q8TD91 643 aa15.2■□□□□ 0.02
TRAFD1-201ENST00000257604 DEPDC1BQ8WUY9 529 aa15.2■□□□□ 0.02
TRAFD1-201ENST00000257604 ZNF570Q96NI8 536 aa15.2■□□□□ 0.02
TRAFD1-201ENST00000257604 RSAD1Q9HA92 442 aa15.2■□□□□ 0.02
TRAFD1-201ENST00000257604 PLXNB2O15031 1838 aa15.2■□□□□ 0.02
TRAFD1-201ENST00000257604 PLXNA1Q9UIW2 1896 aa15.2■□□□□ 0.02
TRAFD1-201ENST00000257604 E2F8A0AVK6 867 aa15.2■□□□□ 0.02
TRAFD1-201ENST00000257604 APOL1O14791 398 aa15.2■□□□□ 0.02
TRAFD1-201ENST00000257604 CD4P01730 458 aa15.2■□□□□ 0.02
TRAFD1-201ENST00000257604 CYP2F1P24903 491 aa15.2■□□□□ 0.02
TRAFD1-201ENST00000257604 CRYBB1P53674 252 aaPredicted RBP15.2■□□□□ 0.02
TRAFD1-201ENST00000257604 INCA1Q0VD86 236 aa15.2■□□□□ 0.02
TRAFD1-201ENST00000257604 AP1B1Q10567 949 aa15.2■□□□□ 0.02
TRAFD1-201ENST00000257604 BBS12Q6ZW61 710 aa15.2■□□□□ 0.02
TRAFD1-201ENST00000257604 PCDH19Q8TAB3 1148 aa15.2■□□□□ 0.02
TRAFD1-201ENST00000257604 SLC35F5Q8WV83 523 aa15.2■□□□□ 0.02
TRAFD1-201ENST00000257604 ZNF560Q96MR9 790 aa15.2■□□□□ 0.02
TRAFD1-201ENST00000257604 LGMNQ99538 433 aa15.2■□□□□ 0.02
TRAFD1-201ENST00000257604 SIK2Q9H0K1 926 aa15.2■□□□□ 0.02
TRAFD1-201ENST00000257604 FAM105AQ9NUU6 356 aa15.2■□□□□ 0.02
TRAFD1-201ENST00000257604 NKIRAS1Q9NYS0 192 aa15.2■□□□□ 0.02
TRAFD1-201ENST00000257604 AP4E1Q9UPM8 1137 aa15.2■□□□□ 0.02
TRAFD1-201ENST00000257604 EME2A4GXA9 379 aaPredicted RBP15.2■□□□□ 0.02
TRAFD1-201ENST00000257604 TRPA1O75762 1119 aa15.2■□□□□ 0.02
TRAFD1-201ENST00000257604 AP1G2O75843 785 aa15.2■□□□□ 0.02
TRAFD1-201ENST00000257604 CA4P22748 312 aa15.2■□□□□ 0.02
TRAFD1-201ENST00000257604 TKTL1P51854 596 aa15.2■□□□□ 0.02
TRAFD1-201ENST00000257604 BST2Q10589 180 aaKnown RBP15.2■□□□□ 0.02
TRAFD1-201ENST00000257604 KCNA10Q16322 511 aa15.2■□□□□ 0.02
TRAFD1-201ENST00000257604 KYAT1Q16773 422 aa15.2■□□□□ 0.02
TRAFD1-201ENST00000257604 LRRC38Q5VT99 294 aa15.2■□□□□ 0.02
TRAFD1-201ENST00000257604 PDIK1LQ8N165 341 aa15.2■□□□□ 0.02
TRAFD1-201ENST00000257604 BBOF1Q8ND07 529 aa15.2■□□□□ 0.02
TRAFD1-201ENST00000257604 C3orf58Q8NDZ4 430 aa15.2■□□□□ 0.02
TRAFD1-201ENST00000257604 IL1RAPL1Q9NZN1 696 aa15.2■□□□□ 0.02
TRAFD1-201ENST00000257604 CCDC189A1A4V9 331 aa15.19■□□□□ 0.02
TRAFD1-201ENST00000257604 THP07101 528 aa15.19■□□□□ 0.02
TRAFD1-201ENST00000257604 PRKAR2AP13861 404 aaKnown RBP15.19■□□□□ 0.02
TRAFD1-201ENST00000257604 IRX4P78413 519 aa15.19■□□□□ 0.02
TRAFD1-201ENST00000257604 MFSD14CQ5VZR4 134 aa15.19■□□□□ 0.02
TRAFD1-201ENST00000257604 SYDE1Q6ZW31 735 aaPredicted RBP15.19■□□□□ 0.02
TRAFD1-201ENST00000257604 EGFL6Q8IUX8 553 aa15.19■□□□□ 0.02
TRAFD1-201ENST00000257604 ZCCHC9Q8N567 271 aaKnown RBP15.19■□□□□ 0.02
TRAFD1-201ENST00000257604 FBF1Q8TES7 1133 aa15.19■□□□□ 0.02
TRAFD1-201ENST00000257604 RNF157Q96PX1 679 aa15.19■□□□□ 0.02
TRAFD1-201ENST00000257604 PCDH18Q9HCL0 1135 aa15.19■□□□□ 0.02
TRAFD1-201ENST00000257604 PRG3Q9Y2Y8 225 aaPredicted RBP15.19■□□□□ 0.02
TRAFD1-201ENST00000257604 A0A0G2JMZ2 1700 aa15.19■□□□□ 0.02
TRAFD1-201ENST00000257604 APOC4-APOC2K7ER74 178 aa15.19■□□□□ 0.02
TRAFD1-201ENST00000257604 XPOTO43592 962 aaKnown RBP15.19■□□□□ 0.02
TRAFD1-201ENST00000257604 FAM155BO75949 473 aa15.19■□□□□ 0.02
TRAFD1-201ENST00000257604 APOC2P02655 101 aa15.19■□□□□ 0.02
TRAFD1-201ENST00000257604 OR4Q2P0C623 313 aa15.19■□□□□ 0.02
TRAFD1-201ENST00000257604 NCAM1P13591 858 aa15.19■□□□□ 0.02
TRAFD1-201ENST00000257604 ELK3P41970 407 aa15.19■□□□□ 0.02
TRAFD1-201ENST00000257604 GRIA1P42261 906 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms