RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 GCOM2Q9BZD3 368 aaPredicted RBP9.55□□□□□ -0.88
RPA1-201ENST00000254719 RNF39Q9H2S5 420 aa9.55□□□□□ -0.88
RPA1-201ENST00000254719 NXF1Q9UBU9 619 aaKnown RBP9.55□□□□□ -0.88
RPA1-201ENST00000254719 COMMD10Q9Y6G5 202 aa9.55□□□□□ -0.88
RPA1-201ENST00000254719 CFAP69A5D8W1 941 aa9.55□□□□□ -0.88
RPA1-201ENST00000254719 CAPN9O14815 690 aa9.55□□□□□ -0.88
RPA1-201ENST00000254719 KRT38O76015 456 aa9.55□□□□□ -0.88
RPA1-201ENST00000254719 LSM8O95777 96 aaKnown RBP9.55□□□□□ -0.88
RPA1-201ENST00000254719 INSRRP14616 1297 aa9.55□□□□□ -0.88
RPA1-201ENST00000254719 LMO2P25791 158 aa9.55□□□□□ -0.88
RPA1-201ENST00000254719 MAGEA4P43358 317 aa9.55□□□□□ -0.88
RPA1-201ENST00000254719 KPNA2P52292 529 aaKnown RBP9.55□□□□□ -0.88
RPA1-201ENST00000254719 SLC12A2P55011 1212 aa9.55□□□□□ -0.88
RPA1-201ENST00000254719 OTUD4Q01804 1114 aaKnown RBP9.55□□□□□ -0.88
RPA1-201ENST00000254719 EIF4EBP2Q13542 120 aaPredicted RBP9.55□□□□□ -0.88
RPA1-201ENST00000254719 AGAP11Q8TF27 550 aa9.55□□□□□ -0.88
RPA1-201ENST00000254719 OTUD5Q96G74 571 aa9.55□□□□□ -0.88
RPA1-201ENST00000254719 RBM15Q96T37 977 aaKnown RBP eCLIP9.55□□□□□ -0.88
RPA1-201ENST00000254719 SNX25Q9H3E2 840 aa9.55□□□□□ -0.88
RPA1-201ENST00000254719 AKT3Q9Y243 479 aa9.55□□□□□ -0.88
RPA1-201ENST00000254719 THSD7BQ9C0I4 1608 aa9.55□□□□□ -0.88
RPA1-201ENST00000254719 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.55□□□□□ -0.88
RPA1-201ENST00000254719 ZBED1O96006 694 aa9.55□□□□□ -0.88
RPA1-201ENST00000254719 SMPD1P17405 629 aa9.55□□□□□ -0.88
RPA1-201ENST00000254719 MAGEA6P43360 314 aa9.55□□□□□ -0.88
RPA1-201ENST00000254719 RABGGTBP53611 331 aa9.55□□□□□ -0.88
RPA1-201ENST00000254719 SESN3P58005 492 aa9.55□□□□□ -0.88
RPA1-201ENST00000254719 RASA2Q15283 850 aa9.55□□□□□ -0.88
RPA1-201ENST00000254719 OR6B2Q6IFH4 312 aa9.55□□□□□ -0.88
RPA1-201ENST00000254719 EFCAB12Q6NXP0 572 aa9.55□□□□□ -0.88
RPA1-201ENST00000254719 CD300LGQ6UXG3 332 aa9.55□□□□□ -0.88
RPA1-201ENST00000254719 FAM183BPQ6ZVS7 135 aa9.55□□□□□ -0.88
RPA1-201ENST00000254719 BBS12Q6ZW61 710 aa9.55□□□□□ -0.88
RPA1-201ENST00000254719 SDCCAG8Q86SQ7 713 aaPredicted RBP9.55□□□□□ -0.88
RPA1-201ENST00000254719 UNC5BQ8IZJ1 945 aa9.55□□□□□ -0.88
RPA1-201ENST00000254719 CALN1Q9BXU9 219 aa9.55□□□□□ -0.88
RPA1-201ENST00000254719 NKX1-2Q9UD57 310 aaPredicted RBP9.55□□□□□ -0.88
RPA1-201ENST00000254719 TUBGCP4Q9UGJ1 667 aa9.55□□□□□ -0.88
RPA1-201ENST00000254719 TBK1Q9UHD2 729 aa9.55□□□□□ -0.88
RPA1-201ENST00000254719 TTLL3Q9Y4R7 772 aa9.55□□□□□ -0.88
RPA1-201ENST00000254719 HES2Q9Y543 173 aa9.55□□□□□ -0.88
RPA1-201ENST00000254719 USH1CQ9Y6N9 552 aa9.55□□□□□ -0.88
RPA1-201ENST00000254719 COL4A6Q14031 1691 aa9.54□□□□□ -0.88
RPA1-201ENST00000254719 PAPSS1O43252 624 aaPredicted RBP9.54□□□□□ -0.88
RPA1-201ENST00000254719 IL18RAPO95256 599 aa9.54□□□□□ -0.88
RPA1-201ENST00000254719 ZNF268Q14587 947 aaPredicted RBP9.54□□□□□ -0.88
RPA1-201ENST00000254719 SOWAHAQ2M3V2 549 aa9.54□□□□□ -0.88
RPA1-201ENST00000254719 ATF7IP2Q5U623 682 aa9.54□□□□□ -0.88
RPA1-201ENST00000254719 IER5Q5VY09 327 aa9.54□□□□□ -0.88
RPA1-201ENST00000254719 ADGRD1Q6QNK2 874 aa9.54□□□□□ -0.88
RPA1-201ENST00000254719 BANPQ8N9N5 519 aa9.54□□□□□ -0.88
RPA1-201ENST00000254719 NPLOC4Q8TAT6 608 aa9.54□□□□□ -0.88
RPA1-201ENST00000254719 CDCA5Q96FF9 252 aa9.54□□□□□ -0.88
RPA1-201ENST00000254719 PPP1R16BQ96T49 567 aa9.54□□□□□ -0.88
RPA1-201ENST00000254719 MYO16Q9Y6X6 1858 aa9.54□□□□□ -0.88
RPA1-201ENST00000254719 ASB14A6NK59 587 aa9.54□□□□□ -0.88
RPA1-201ENST00000254719 ITGB3P05106 788 aa9.54□□□□□ -0.88
RPA1-201ENST00000254719 LGALS2P05162 132 aa9.54□□□□□ -0.88
RPA1-201ENST00000254719 STAG3L1P0CL83 205 aa9.54□□□□□ -0.88
RPA1-201ENST00000254719 GHRP10912 638 aa9.54□□□□□ -0.88
RPA1-201ENST00000254719 PGFP49763 221 aa9.54□□□□□ -0.88
RPA1-201ENST00000254719 NEK3P51956 506 aa9.54□□□□□ -0.88
RPA1-201ENST00000254719 SLC18A1P54219 525 aa9.54□□□□□ -0.88
RPA1-201ENST00000254719 BASP1P80723 227 aaKnown RBP9.54□□□□□ -0.88
RPA1-201ENST00000254719 TTLL4Q14679 1199 aa9.54□□□□□ -0.88
RPA1-201ENST00000254719 SYCP2LQ5T4T6 812 aa9.54□□□□□ -0.88
RPA1-201ENST00000254719 RSPH3Q86UC2 560 aa9.54□□□□□ -0.88
RPA1-201ENST00000254719 NDRG1Q92597 394 aaKnown RBP9.54□□□□□ -0.88
RPA1-201ENST00000254719 OPTNQ96CV9 577 aa9.54□□□□□ -0.88
RPA1-201ENST00000254719 TRIM55Q9BYV6 548 aa9.54□□□□□ -0.88
RPA1-201ENST00000254719 ZNF518BQ9C0D4 1074 aa9.54□□□□□ -0.88
RPA1-201ENST00000254719 SLC17A6Q9P2U8 582 aa9.54□□□□□ -0.88
RPA1-201ENST00000254719 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.54□□□□□ -0.88
RPA1-201ENST00000254719 ADCYAP1R1P41586 468 aa9.54□□□□□ -0.88
RPA1-201ENST00000254719 ITIH4Q14624 930 aa9.54□□□□□ -0.88
RPA1-201ENST00000254719 BBS9Q3SYG4 887 aa9.54□□□□□ -0.88
RPA1-201ENST00000254719 SLC9A4Q6AI14 798 aa9.54□□□□□ -0.88
RPA1-201ENST00000254719 ZNF354CQ86Y25 554 aa9.54□□□□□ -0.88
RPA1-201ENST00000254719 PIAS4Q8N2W9 510 aaPredicted RBP9.54□□□□□ -0.88
RPA1-201ENST00000254719 NT5C3BQ969T7 300 aa9.54□□□□□ -0.88
RPA1-201ENST00000254719 METTL5Q9NRN9 209 aaKnown RBP9.54□□□□□ -0.88
RPA1-201ENST00000254719 GINS2Q9Y248 185 aa9.54□□□□□ -0.88
RPA1-201ENST00000254719 ARL2BPQ9Y2Y0 163 aa9.54□□□□□ -0.88
RPA1-201ENST00000254719 C2orf71A6NGG8 1288 aa9.53□□□□□ -0.88
RPA1-201ENST00000254719 METTL18O95568 372 aa9.53□□□□□ -0.88
RPA1-201ENST00000254719 IHHQ14623 411 aa9.53□□□□□ -0.88
RPA1-201ENST00000254719 RFX8Q6ZV50 586 aa9.53□□□□□ -0.88
RPA1-201ENST00000254719 CTU1Q7Z7A3 348 aaKnown RBP9.53□□□□□ -0.88
RPA1-201ENST00000254719 THNSL1Q8IYQ7 743 aa9.53□□□□□ -0.88
RPA1-201ENST00000254719 HEXIM2Q96MH2 286 aaKnown RBP9.53□□□□□ -0.88
RPA1-201ENST00000254719 NOP53Q9NZM5 478 aaKnown RBP9.53□□□□□ -0.88
RPA1-201ENST00000254719 ZWINTO95229 277 aa9.53□□□□□ -0.88
RPA1-201ENST00000254719 SLC25A27O95847 323 aa9.53□□□□□ -0.88
RPA1-201ENST00000254719 F7P08709 466 aaPredicted RBP9.53□□□□□ -0.88
RPA1-201ENST00000254719 VAV1P15498 845 aa9.53□□□□□ -0.88
RPA1-201ENST00000254719 POU5F1BQ06416 359 aa9.53□□□□□ -0.88
RPA1-201ENST00000254719 TUBB3Q13509 450 aa9.53□□□□□ -0.88
RPA1-201ENST00000254719 OLIG2Q13516 323 aa9.53□□□□□ -0.88
RPA1-201ENST00000254719 MTFR1Q15390 333 aa9.53□□□□□ -0.88
RPA1-201ENST00000254719 TMEM151AQ8N4L1 468 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms