RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 CARD9Q9H257 536 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 USP1O94782 785 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 SUPT7LO94864 414 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 LSP1P33241 339 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 S100A5P33763 92 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 NME5P56597 212 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 UBE3AQ05086 875 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 TGM3Q08188 693 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 C11orf63Q6NUN7 778 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 CYP4Z1Q86W10 505 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 ACTRT1Q8TDG2 376 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 TAS1R2Q8TE23 839 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 PAWRQ96IZ0 340 aaKnown RBP8.97□□□□□ -0.97
PTCD3-201ENST00000254630 CAMKK2Q96RR4 588 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 TMEM121Q9BTD3 319 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 KBTBD4Q9NVX7 518 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 PLA2G4CQ9UP65 541 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.96□□□□□ -0.97
PTCD3-201ENST00000254630 TGFB3P10600 412 aa8.96□□□□□ -0.97
PTCD3-201ENST00000254630 CYP2A6P11509 494 aaPredicted RBP8.96□□□□□ -0.97
PTCD3-201ENST00000254630 DARSP14868 501 aaKnown RBP8.96□□□□□ -0.97
PTCD3-201ENST00000254630 SLC12A3P55017 1021 aa8.96□□□□□ -0.97
PTCD3-201ENST00000254630 SLC39A12Q504Y0 691 aa8.96□□□□□ -0.97
PTCD3-201ENST00000254630 TTI2Q6NXR4 508 aa8.96□□□□□ -0.97
PTCD3-201ENST00000254630 MIER2Q8N344 545 aa8.96□□□□□ -0.97
PTCD3-201ENST00000254630 DIS3LQ8TF46 1054 aaKnown RBP8.96□□□□□ -0.97
PTCD3-201ENST00000254630 TUBGCP3Q96CW5 907 aa8.96□□□□□ -0.97
PTCD3-201ENST00000254630 PPP1R10Q96QC0 940 aaKnown RBP8.96□□□□□ -0.97
PTCD3-201ENST00000254630 IGFLR1Q9H665 355 aa8.96□□□□□ -0.97
PTCD3-201ENST00000254630 CTNNAL1Q9UBT7 734 aa8.96□□□□□ -0.97
PTCD3-201ENST00000254630 TSPAN16Q9UKR8 245 aa8.96□□□□□ -0.97
PTCD3-201ENST00000254630 CYP2A7P20853 494 aa8.96□□□□□ -0.97
PTCD3-201ENST00000254630 GLRBP48167 497 aa8.96□□□□□ -0.97
PTCD3-201ENST00000254630 TRPC1P48995 793 aa8.96□□□□□ -0.97
PTCD3-201ENST00000254630 AMPD2Q01433 879 aa8.96□□□□□ -0.97
PTCD3-201ENST00000254630 ZNF571Q7Z3V5 609 aaPredicted RBP8.96□□□□□ -0.97
PTCD3-201ENST00000254630 FAM131BQ86XD5 332 aa8.96□□□□□ -0.97
PTCD3-201ENST00000254630 EDEM1Q92611 657 aa8.96□□□□□ -0.97
PTCD3-201ENST00000254630 TATDN2Q93075 761 aa8.96□□□□□ -0.97
PTCD3-201ENST00000254630 NLNQ9BYT8 704 aa8.96□□□□□ -0.97
PTCD3-201ENST00000254630 CIPCQ9C0C6 399 aa8.96□□□□□ -0.97
PTCD3-201ENST00000254630 PDGFDQ9GZP0 370 aaPredicted RBP8.96□□□□□ -0.97
PTCD3-201ENST00000254630 UBXN8O00124 270 aa8.96□□□□□ -0.98
PTCD3-201ENST00000254630 CSDE1O75534 798 aaKnown RBP8.96□□□□□ -0.98
PTCD3-201ENST00000254630 APOA1P02647 267 aa8.96□□□□□ -0.98
PTCD3-201ENST00000254630 PPATQ06203 517 aa8.96□□□□□ -0.98
PTCD3-201ENST00000254630 ACOX1Q15067 660 aa8.96□□□□□ -0.98
PTCD3-201ENST00000254630 GRTP1Q5TC63 336 aa8.96□□□□□ -0.98
PTCD3-201ENST00000254630 PTAR1Q7Z6K3 402 aaPredicted RBP8.96□□□□□ -0.98
PTCD3-201ENST00000254630 UROC1Q96N76 676 aa8.96□□□□□ -0.98
PTCD3-201ENST00000254630 CYP4F12Q9HCS2 524 aa8.96□□□□□ -0.98
PTCD3-201ENST00000254630 LNPEPQ9UIQ6 1025 aa8.96□□□□□ -0.98
PTCD3-201ENST00000254630 IFRD1O00458 451 aaPredicted RBP8.96□□□□□ -0.98
PTCD3-201ENST00000254630 NR5A2O00482 541 aa8.96□□□□□ -0.98
PTCD3-201ENST00000254630 NCAM2O15394 837 aa8.96□□□□□ -0.98
PTCD3-201ENST00000254630 VEGFAP15692 232 aaPredicted RBP8.96□□□□□ -0.98
PTCD3-201ENST00000254630 TARSP26639 723 aaKnown RBP8.96□□□□□ -0.98
PTCD3-201ENST00000254630 RRM2P31350 389 aa8.96□□□□□ -0.98
PTCD3-201ENST00000254630 GPC1P35052 558 aa8.96□□□□□ -0.98
PTCD3-201ENST00000254630 PSMC6P62333 389 aa8.96□□□□□ -0.98
PTCD3-201ENST00000254630 DDX39BQ13838 428 aaKnown RBP8.96□□□□□ -0.98
PTCD3-201ENST00000254630 SPANXN3Q5MJ09 141 aa8.96□□□□□ -0.98
PTCD3-201ENST00000254630 C16orf59Q7L2K0 433 aa8.96□□□□□ -0.98
PTCD3-201ENST00000254630 SLC22A9Q8IVM8 553 aa8.96□□□□□ -0.98
PTCD3-201ENST00000254630 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.96□□□□□ -0.98
PTCD3-201ENST00000254630 ACAT1P24752 427 aaKnown RBP8.96□□□□□ -0.98
PTCD3-201ENST00000254630 RFX3P48380 749 aa8.96□□□□□ -0.98
PTCD3-201ENST00000254630 C1QBPQ07021 282 aaKnown RBP8.96□□□□□ -0.98
PTCD3-201ENST00000254630 ITIH4Q14624 930 aa8.96□□□□□ -0.98
PTCD3-201ENST00000254630 DENND1BQ6P3S1 775 aa8.96□□□□□ -0.98
PTCD3-201ENST00000254630 TMC7Q7Z402 723 aa8.96□□□□□ -0.98
PTCD3-201ENST00000254630 ABRAQ8N0Z2 381 aa8.96□□□□□ -0.98
PTCD3-201ENST00000254630 MDM1Q8TC05 714 aa8.96□□□□□ -0.98
PTCD3-201ENST00000254630 IL17RAQ96F46 866 aa8.96□□□□□ -0.98
PTCD3-201ENST00000254630 CCDC3Q9BQI4 270 aa8.96□□□□□ -0.98
PTCD3-201ENST00000254630 THUMPD3Q9BV44 507 aaKnown RBP8.96□□□□□ -0.98
PTCD3-201ENST00000254630 ATXN3LQ9H3M9 355 aa8.96□□□□□ -0.98
PTCD3-201ENST00000254630 OSGEPL1Q9H4B0 414 aa8.96□□□□□ -0.98
PTCD3-201ENST00000254630 RAD18Q9NS91 495 aa8.96□□□□□ -0.98
PTCD3-201ENST00000254630 MROH7Q68CQ1 1323 aa8.96□□□□□ -0.98
PTCD3-201ENST00000254630 ANKRD26Q9UPS8 1709 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 CPA2P48052 419 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 HSPA13P48723 471 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 MYBPC2Q14324 1141 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 KDM7AQ6ZMT4 941 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 PLEKHM3Q6ZWE6 761 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 PNKPQ96T60 521 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 PAFAH2Q99487 392 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 TMBIM4Q9HC24 238 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 RRN3Q9NYV6 651 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 FZD1Q9UP38 647 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 A0A087X0T9 212 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 WNT10BO00744 389 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 XYLBO75191 536 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 DEAF1O75398 565 aaPredicted RBP8.95□□□□□ -0.98
PTCD3-201ENST00000254630 FAM228BP0C875 321 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 GHRP10912 638 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 PGAM1P18669 254 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 ADCYAP1R1P41586 468 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 SLC16A1P53985 500 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms