RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 MAPK9P45984 424 aa19.24■□□□□ 0.67
SMARCC1-201ENST00000254480 EPHB3P54753 998 aa19.24■□□□□ 0.67
SMARCC1-201ENST00000254480 BST2Q10589 180 aaKnown RBP19.24■□□□□ 0.67
SMARCC1-201ENST00000254480 IGFLR1Q9H665 355 aa19.24■□□□□ 0.67
SMARCC1-201ENST00000254480 RIOX1Q9H6W3 641 aa19.24■□□□□ 0.67
SMARCC1-201ENST00000254480 ZNF682O95780 498 aa19.24■□□□□ 0.67
SMARCC1-201ENST00000254480 GLI1P08151 1106 aa19.24■□□□□ 0.67
SMARCC1-201ENST00000254480 S100A5P33763 92 aa19.24■□□□□ 0.67
SMARCC1-201ENST00000254480 SERPINB10P48595 397 aa19.24■□□□□ 0.67
SMARCC1-201ENST00000254480 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.24■□□□□ 0.672e-7■■■■□ 19.4
SMARCC1-201ENST00000254480 SNX13Q9Y5W8 968 aa19.24■□□□□ 0.67
SMARCC1-201ENST00000254480 TCRBV5S4A2TA0A5A2 114 aa19.24■□□□□ 0.67
SMARCC1-201ENST00000254480 SLITRK3O94933 977 aa19.24■□□□□ 0.67
SMARCC1-201ENST00000254480 ZNF284Q2VY69 593 aa19.24■□□□□ 0.67
SMARCC1-201ENST00000254480 LRRC8BQ6P9F7 803 aa19.24■□□□□ 0.67
SMARCC1-201ENST00000254480 MICU2Q8IYU8 434 aa19.24■□□□□ 0.67
SMARCC1-201ENST00000254480 RBBP8Q99708 897 aa19.24■□□□□ 0.67
SMARCC1-201ENST00000254480 PDGFCQ9NRA1 345 aa19.24■□□□□ 0.67
SMARCC1-201ENST00000254480 DLGAP2Q9P1A6 1054 aa19.24■□□□□ 0.67
SMARCC1-201ENST00000254480 DCDC2Q9UHG0 476 aa19.24■□□□□ 0.67
SMARCC1-201ENST00000254480 ALBP02768 609 aa19.23■□□□□ 0.67
SMARCC1-201ENST00000254480 DSG3P32926 999 aa19.23■□□□□ 0.67
SMARCC1-201ENST00000254480 TIGD7Q6NT04 549 aaPredicted RBP19.23■□□□□ 0.67
SMARCC1-201ENST00000254480 LACTBL1A8MY62 500 aa19.23■□□□□ 0.67
SMARCC1-201ENST00000254480 EML1O00423 815 aa19.23■□□□□ 0.67
SMARCC1-201ENST00000254480 BAIAP3O94812 1187 aa19.23■□□□□ 0.67
SMARCC1-201ENST00000254480 ALDH9A1P49189 494 aa19.23■□□□□ 0.67
SMARCC1-201ENST00000254480 BFSP2Q13515 415 aa19.23■□□□□ 0.67
SMARCC1-201ENST00000254480 ZNF280DQ6N043 979 aa19.23■□□□□ 0.67
SMARCC1-201ENST00000254480 MTDHQ86UE4 582 aaKnown RBP19.23■□□□□ 0.67
SMARCC1-201ENST00000254480 COPS7BQ9H9Q2 264 aaPredicted RBP19.23■□□□□ 0.67
SMARCC1-201ENST00000254480 SETBP1Q9Y6X0 1596 aa19.23■□□□□ 0.67
SMARCC1-201ENST00000254480 WDR27A2RRH5 827 aa19.23■□□□□ 0.67
SMARCC1-201ENST00000254480 CDCA5Q96FF9 252 aa19.23■□□□□ 0.67
SMARCC1-201ENST00000254480 VANGL2Q9ULK5 521 aa19.23■□□□□ 0.67
SMARCC1-201ENST00000254480 A0A087X0B3 334 aa19.23■□□□□ 0.67
SMARCC1-201ENST00000254480 KCNK1O00180 336 aa19.23■□□□□ 0.67
SMARCC1-201ENST00000254480 CYP7B1O75881 506 aa19.23■□□□□ 0.67
SMARCC1-201ENST00000254480 GLP2RO95838 553 aa19.23■□□□□ 0.67
SMARCC1-201ENST00000254480 LHX1P48742 406 aa19.23■□□□□ 0.67
SMARCC1-201ENST00000254480 RARRES1P49788 294 aa19.23■□□□□ 0.67
SMARCC1-201ENST00000254480 NFYCQ13952 458 aa19.23■□□□□ 0.67
SMARCC1-201ENST00000254480 USP6NLQ92738 828 aa19.23■□□□□ 0.67
SMARCC1-201ENST00000254480 NFKBIZQ9BYH8 718 aa19.23■□□□□ 0.67
SMARCC1-201ENST00000254480 PPRC1Q5VV67 1664 aaKnown RBP19.23■□□□□ 0.67
SMARCC1-201ENST00000254480 CCNT2O60583 730 aaKnown RBP19.23■□□□□ 0.67
SMARCC1-201ENST00000254480 AASDHQ4L235 1098 aaPredicted RBP19.23■□□□□ 0.67
SMARCC1-201ENST00000254480 C4orf22Q6V702 233 aa19.23■□□□□ 0.67
SMARCC1-201ENST00000254480 SNX8Q9Y5X2 465 aa19.23■□□□□ 0.67
SMARCC1-201ENST00000254480 RNF103O00237 685 aa19.22■□□□□ 0.67
SMARCC1-201ENST00000254480 RPS7P62081 194 aaKnown RBP19.22■□□□□ 0.67
SMARCC1-201ENST00000254480 PRAMEF19Q5SWL8 479 aa19.22■□□□□ 0.67
SMARCC1-201ENST00000254480 MTMR8Q96EF0 704 aa19.22■□□□□ 0.67
SMARCC1-201ENST00000254480 PPCSQ9HAB8 311 aa19.22■□□□□ 0.67
SMARCC1-201ENST00000254480 DLC1Q96QB1 1528 aa19.22■□□□□ 0.67
SMARCC1-201ENST00000254480 TTC33Q6PID6 262 aaPredicted RBP19.22■□□□□ 0.67
SMARCC1-201ENST00000254480 SEMA4AQ9H3S1 761 aa19.22■□□□□ 0.67
SMARCC1-201ENST00000254480 IMPAD1Q9NX62 359 aa19.22■□□□□ 0.67
SMARCC1-201ENST00000254480 SCN3BQ9NY72 215 aa19.22■□□□□ 0.67
SMARCC1-201ENST00000254480 PCDHAC2Q9Y5I4 1007 aa19.22■□□□□ 0.67
SMARCC1-201ENST00000254480 ZNF606Q8WXB4 792 aa19.22■□□□□ 0.67
SMARCC1-201ENST00000254480 BAZ2BQ9UIF8 2168 aaKnown RBP19.22■□□□□ 0.67
SMARCC1-201ENST00000254480 M0R3G1 203 aa19.22■□□□□ 0.67
SMARCC1-201ENST00000254480 USP12O75317 370 aa19.22■□□□□ 0.67
SMARCC1-201ENST00000254480 F9P00740 461 aa19.22■□□□□ 0.67
SMARCC1-201ENST00000254480 DGKZQ13574 1117 aa19.22■□□□□ 0.67
SMARCC1-201ENST00000254480 CD302Q8IX05 232 aa19.22■□□□□ 0.67
SMARCC1-201ENST00000254480 BBS2Q9BXC9 721 aa19.22■□□□□ 0.67
SMARCC1-201ENST00000254480 SMAPO00193 183 aa19.22■□□□□ 0.67
SMARCC1-201ENST00000254480 NDUFB5O43674 189 aa19.22■□□□□ 0.67
SMARCC1-201ENST00000254480 OR1E1P30953 314 aa19.22■□□□□ 0.67
SMARCC1-201ENST00000254480 MRPL28Q13084 256 aaKnown RBP19.22■□□□□ 0.67
SMARCC1-201ENST00000254480 MPP3Q13368 585 aa19.22■□□□□ 0.67
SMARCC1-201ENST00000254480 ERMARDQ5T6L9 678 aa19.22■□□□□ 0.67
SMARCC1-201ENST00000254480 BBS7Q8IWZ6 715 aa19.22■□□□□ 0.67
SMARCC1-201ENST00000254480 CENPLQ8N0S6 344 aaPredicted RBP19.22■□□□□ 0.67
SMARCC1-201ENST00000254480 TDRD5Q8NAT2 981 aaKnown RBP19.22■□□□□ 0.67
SMARCC1-201ENST00000254480 PCSK9Q8NBP7 692 aaKnown RBP19.22■□□□□ 0.67
SMARCC1-201ENST00000254480 SLC2A14Q8TDB8 520 aa19.22■□□□□ 0.67
SMARCC1-201ENST00000254480 CATSPER2Q96P56 530 aa19.22■□□□□ 0.67
SMARCC1-201ENST00000254480 TMEM120AQ9BXJ8 343 aa19.22■□□□□ 0.67
SMARCC1-201ENST00000254480 PADI4Q9UM07 663 aa19.22■□□□□ 0.67
SMARCC1-201ENST00000254480 SNCAIPQ9Y6H5 919 aa19.22■□□□□ 0.67
SMARCC1-201ENST00000254480 STRNO43815 780 aa19.21■□□□□ 0.67
SMARCC1-201ENST00000254480 GSTM1P09488 218 aa19.21■□□□□ 0.67
SMARCC1-201ENST00000254480 ATP6V1B2P21281 511 aa19.21■□□□□ 0.67
SMARCC1-201ENST00000254480 ALDH5A1P51649 535 aaPredicted RBP19.21■□□□□ 0.67
SMARCC1-201ENST00000254480 TLK2Q86UE8 772 aa19.21■□□□□ 0.67
SMARCC1-201ENST00000254480 ARRDC4Q8NCT1 418 aa19.21■□□□□ 0.67
SMARCC1-201ENST00000254480 PNMA5Q96PV4 448 aa19.21■□□□□ 0.67
SMARCC1-201ENST00000254480 ACP6Q9NPH0 428 aa19.21■□□□□ 0.67
SMARCC1-201ENST00000254480 TDRKHQ9Y2W6 561 aaKnown RBP19.21■□□□□ 0.67
SMARCC1-201ENST00000254480 ITGALP20701 1170 aa19.21■□□□□ 0.67
SMARCC1-201ENST00000254480 KLRC2P26717 231 aa19.21■□□□□ 0.67
SMARCC1-201ENST00000254480 MFSD10Q14728 455 aa19.21■□□□□ 0.67
SMARCC1-201ENST00000254480 ABRAQ8N0Z2 381 aa19.21■□□□□ 0.67
SMARCC1-201ENST00000254480 SLC16A10Q8TF71 515 aa19.21■□□□□ 0.67
SMARCC1-201ENST00000254480 COPS5Q92905 334 aa19.21■□□□□ 0.67
SMARCC1-201ENST00000254480 UBE2OQ9C0C9 1292 aaKnown RBP19.21■□□□□ 0.67
SMARCC1-201ENST00000254480 PLA2G4CQ9UP65 541 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms