RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 ABHD8Q96I13 439 aa21.15■□□□□ 0.98
RARA-201ENST00000254066 COX4I2Q96KJ9 171 aa21.15■□□□□ 0.98
RARA-201ENST00000254066 SERPINI1Q99574 410 aa21.15■□□□□ 0.98
RARA-201ENST00000254066 CCT7Q99832 543 aa21.15■□□□□ 0.98
RARA-201ENST00000254066 CD209Q9NNX6 404 aa21.15■□□□□ 0.98
RARA-201ENST00000254066 APPL1Q9UKG1 709 aa21.15■□□□□ 0.98
RARA-201ENST00000254066 GNEQ9Y223 722 aaKnown RBP21.15■□□□□ 0.98
RARA-201ENST00000254066 ZNF701M0R085 212 aaPredicted RBP21.15■□□□□ 0.98
RARA-201ENST00000254066 NFIXQ14938 502 aa21.15■□□□□ 0.98
RARA-201ENST00000254066 IYDQ6PHW0 289 aa21.15■□□□□ 0.98
RARA-201ENST00000254066 DENND5BQ6ZUT9 1274 aa21.15■□□□□ 0.98
RARA-201ENST00000254066 POLNQ7Z5Q5 900 aa21.15■□□□□ 0.98
RARA-201ENST00000254066 CCDC127Q96BQ5 260 aa21.15■□□□□ 0.98
RARA-201ENST00000254066 FBXL18Q96ME1 805 aa21.15■□□□□ 0.98
RARA-201ENST00000254066 C20orf27Q9GZN8 174 aa21.15■□□□□ 0.98
RARA-201ENST00000254066 TRIM43BA6NCK2 446 aa21.14■□□□□ 0.97
RARA-201ENST00000254066 BOLA2-SMG1P6H3BVE0 249 aa21.14■□□□□ 0.97
RARA-201ENST00000254066 DPEP1P16444 411 aa21.14■□□□□ 0.97
RARA-201ENST00000254066 TUBA4AP68366 448 aa21.14■□□□□ 0.97
RARA-201ENST00000254066 TAP1Q03518 808 aa21.14■□□□□ 0.97
RARA-201ENST00000254066 RELAQ04206 551 aa21.14■□□□□ 0.97
RARA-201ENST00000254066 RTKNQ9BST9 563 aa21.14■□□□□ 0.97
RARA-201ENST00000254066 NRXN2Q9P2S2 1712 aa21.14■□□□□ 0.97
RARA-201ENST00000254066 GOLGA8IPA6NC78 632 aa21.14■□□□□ 0.97
RARA-201ENST00000254066 GOLGA8JA6NMD2 632 aa21.14■□□□□ 0.97
RARA-201ENST00000254066 C1QAP02745 245 aa21.14■□□□□ 0.97
RARA-201ENST00000254066 ALOX15P16050 662 aaPredicted RBP21.14■□□□□ 0.97
RARA-201ENST00000254066 PHKA2P46019 1235 aa21.14■□□□□ 0.97
RARA-201ENST00000254066 PIGHQ14442 188 aaPredicted RBP21.14■□□□□ 0.97
RARA-201ENST00000254066 C2CD6Q53TS8 623 aa21.14■□□□□ 0.97
RARA-201ENST00000254066 POU5F2Q8N7G0 328 aa21.14■□□□□ 0.97
RARA-201ENST00000254066 TSPAN14Q8NG11 270 aa21.14■□□□□ 0.97
RARA-201ENST00000254066 RIN3Q8TB24 985 aa21.14■□□□□ 0.97
RARA-201ENST00000254066 ZNF395Q9H8N7 513 aaPredicted RBP21.14■□□□□ 0.97
RARA-201ENST00000254066 IGSF9Q9P2J2 1179 aa21.14■□□□□ 0.97
RARA-201ENST00000254066 RIMS3Q9UJD0 308 aa21.14■□□□□ 0.97
RARA-201ENST00000254066 FADS3Q9Y5Q0 445 aa21.14■□□□□ 0.97
RARA-201ENST00000254066 RBP3P10745 1247 aa21.13■□□□□ 0.97
RARA-201ENST00000254066 THRAP10827 490 aa21.13■□□□□ 0.97
RARA-201ENST00000254066 ZNF12P17014 697 aa21.13■□□□□ 0.97
RARA-201ENST00000254066 PRKCHP24723 683 aa21.13■□□□□ 0.97
RARA-201ENST00000254066 HOXD12P35452 270 aa21.13■□□□□ 0.97
RARA-201ENST00000254066 YWHAGP61981 247 aaKnown RBP eCLIP21.13■□□□□ 0.97
RARA-201ENST00000254066 PSMC5P62195 406 aa21.13■□□□□ 0.97
RARA-201ENST00000254066 PFKPQ01813 784 aa21.13■□□□□ 0.97
RARA-201ENST00000254066 TCHHL1Q5QJ38 904 aaPredicted RBP21.13■□□□□ 0.97
RARA-201ENST00000254066 IGDCC3Q8IVU1 814 aa21.13■□□□□ 0.97
RARA-201ENST00000254066 NIPA2Q8N8Q9 360 aa21.13■□□□□ 0.97
RARA-201ENST00000254066 HIPK4Q8NE63 616 aa21.13■□□□□ 0.97
RARA-201ENST00000254066 ACTL9Q8TC94 416 aa21.13■□□□□ 0.97
RARA-201ENST00000254066 NUF2Q9BZD4 464 aa21.13■□□□□ 0.97
RARA-201ENST00000254066 PIM2Q9P1W9 311 aa21.13■□□□□ 0.97
RARA-201ENST00000254066 VPS28Q9UK41 221 aa21.13■□□□□ 0.97
RARA-201ENST00000254066 TDRKHQ9Y2W6 561 aaKnown RBP21.13■□□□□ 0.97
RARA-201ENST00000254066 TCRBV7S3A2A0A539 114 aa21.13■□□□□ 0.97
RARA-201ENST00000254066 PPARGP37231 505 aaPredicted RBP21.13■□□□□ 0.97
RARA-201ENST00000254066 GDF10P55107 478 aa21.13■□□□□ 0.97
RARA-201ENST00000254066 OTUD4Q01804 1114 aaKnown RBP21.13■□□□□ 0.97
RARA-201ENST00000254066 FSCBQ5H9T9 825 aa21.13■□□□□ 0.97
RARA-201ENST00000254066 BBS12Q6ZW61 710 aa21.13■□□□□ 0.97
RARA-201ENST00000254066 LPCAT2Q7L5N7 544 aa21.13■□□□□ 0.97
RARA-201ENST00000254066 TRIML2Q8N7C3 387 aa21.13■□□□□ 0.97
RARA-201ENST00000254066 DLG3Q92796 817 aa21.13■□□□□ 0.97
RARA-201ENST00000254066 SGF29Q96ES7 293 aa21.13■□□□□ 0.97
RARA-201ENST00000254066 TEKT3Q9BXF9 490 aa21.13■□□□□ 0.97
RARA-201ENST00000254066 KCNQ5Q9NR82 932 aa21.13■□□□□ 0.97
RARA-201ENST00000254066 VPS45Q9NRW7 570 aa21.13■□□□□ 0.97
RARA-201ENST00000254066 TBC1D23Q9NUY8 699 aa21.13■□□□□ 0.97
RARA-201ENST00000254066 SLX4Q8IY92 1834 aa21.12■□□□□ 0.97
RARA-201ENST00000254066 CCDC195A0A1B0GUA6 201 aa21.12■□□□□ 0.97
RARA-201ENST00000254066 SORBS2O94875 1100 aaKnown RBP21.12■□□□□ 0.97
RARA-201ENST00000254066 P4HBP07237 508 aaKnown RBP21.12■□□□□ 0.97
RARA-201ENST00000254066 GIPC3Q8TF64 312 aa21.12■□□□□ 0.97
RARA-201ENST00000254066 CYP4F11Q9HBI6 524 aa21.12■□□□□ 0.97
RARA-201ENST00000254066 HERC5Q9UII4 1024 aaKnown RBP21.12■□□□□ 0.97
RARA-201ENST00000254066 DAGLAQ9Y4D2 1042 aa21.12■□□□□ 0.97
RARA-201ENST00000254066 TTLL3Q9Y4R7 772 aa21.12■□□□□ 0.97
RARA-201ENST00000254066 BRCA1P38398 1863 aaKnown RBP21.12■□□□□ 0.97
RARA-201ENST00000254066 CCDC162PA2VCL2 907 aa21.12■□□□□ 0.97
RARA-201ENST00000254066 CALCAP01258 141 aa21.12■□□□□ 0.97
RARA-201ENST00000254066 SERPINB2P05120 415 aa21.12■□□□□ 0.97
RARA-201ENST00000254066 FOXD4Q12950 439 aaPredicted RBP21.12■□□□□ 0.97
RARA-201ENST00000254066 PDPK2PQ6A1A2 396 aa21.12■□□□□ 0.97
RARA-201ENST00000254066 TFB1MQ8WVM0 346 aaKnown RBP21.12■□□□□ 0.97
RARA-201ENST00000254066 USP6NLQ92738 828 aa21.12■□□□□ 0.97
RARA-201ENST00000254066 RPGRQ92834 1020 aaKnown RBP21.12■□□□□ 0.97
RARA-201ENST00000254066 APOL6Q9BWW8 343 aa21.12■□□□□ 0.97
RARA-201ENST00000254066 PCDHGB4Q9UN71 923 aa21.12■□□□□ 0.97
RARA-201ENST00000254066 PCDHGB5Q9Y5G0 923 aa21.12■□□□□ 0.97
RARA-201ENST00000254066 HTR3EA5X5Y0 456 aa21.11■□□□□ 0.97
RARA-201ENST00000254066 CYB561D2O14569 222 aa21.11■□□□□ 0.97
RARA-201ENST00000254066 C8BP07358 591 aa21.11■□□□□ 0.97
RARA-201ENST00000254066 PSMC3P17980 439 aa21.11■□□□□ 0.97
RARA-201ENST00000254066 TXNL4AP83876 142 aaKnown RBP21.11■□□□□ 0.97
RARA-201ENST00000254066 CYP24A1Q07973 514 aa21.11■□□□□ 0.97
RARA-201ENST00000254066 PICALMQ13492 652 aa21.11■□□□□ 0.97
RARA-201ENST00000254066 MTMR2Q13614 643 aa21.11■□□□□ 0.97
RARA-201ENST00000254066 DPYSL3Q14195 570 aa21.11■□□□□ 0.97
RARA-201ENST00000254066 MFSD14BQ5SR56 506 aa21.11■□□□□ 0.97
RARA-201ENST00000254066 TIFABQ6ZNK6 161 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms