RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 NDRG1Q92597 394 aaKnown RBP25.5■■□□□ 1.67
SDF2L1-201ENST00000248958 CD101Q93033 1021 aa25.5■■□□□ 1.67
SDF2L1-201ENST00000248958 CHFRQ96EP1 664 aa25.5■■□□□ 1.67
SDF2L1-201ENST00000248958 TRIM62Q9BVG3 475 aa25.5■■□□□ 1.67
SDF2L1-201ENST00000248958 GANQ9H2C0 597 aa25.5■■□□□ 1.67
SDF2L1-201ENST00000248958 MARCH2Q9P0N8 246 aa25.5■■□□□ 1.67
SDF2L1-201ENST00000248958 CEP83Q9Y592 693 aa25.5■■□□□ 1.67
SDF2L1-201ENST00000248958 LAMTOR5O43504 91 aa25.49■■□□□ 1.67
SDF2L1-201ENST00000248958 GABBR2O75899 941 aa25.49■■□□□ 1.67
SDF2L1-201ENST00000248958 CYP17A1P05093 508 aa25.49■■□□□ 1.67
SDF2L1-201ENST00000248958 EIF2DP41214 584 aaKnown RBP25.49■■□□□ 1.67
SDF2L1-201ENST00000248958 GALK1P51570 392 aa25.49■■□□□ 1.67
SDF2L1-201ENST00000248958 SNX16P57768 344 aa25.49■■□□□ 1.67
SDF2L1-201ENST00000248958 GAD2Q05329 585 aa25.49■■□□□ 1.67
SDF2L1-201ENST00000248958 CCINQ13939 588 aa25.49■■□□□ 1.67
SDF2L1-201ENST00000248958 RHBDF2Q6PJF5 856 aa25.49■■□□□ 1.67
SDF2L1-201ENST00000248958 TMEM110Q86TL2 294 aa25.49■■□□□ 1.67
SDF2L1-201ENST00000248958 SLC47A2Q86VL8 602 aa25.49■■□□□ 1.67
SDF2L1-201ENST00000248958 BBS7Q8IWZ6 715 aa25.49■■□□□ 1.67
SDF2L1-201ENST00000248958 NOX5Q96PH1 765 aa25.49■■□□□ 1.67
SDF2L1-201ENST00000248958 ERGIC2Q96RQ1 377 aa25.49■■□□□ 1.67
SDF2L1-201ENST00000248958 SIK3Q9Y2K2 1263 aa25.49■■□□□ 1.67
SDF2L1-201ENST00000248958 H0Y858 1186 aa25.48■■□□□ 1.67
SDF2L1-201ENST00000248958 GREM1O60565 184 aa25.48■■□□□ 1.67
SDF2L1-201ENST00000248958 STC2O76061 302 aa25.48■■□□□ 1.67
SDF2L1-201ENST00000248958 LTFP02788 710 aa25.48■■□□□ 1.67
SDF2L1-201ENST00000248958 NHLH1Q02575 133 aa25.48■■□□□ 1.67
SDF2L1-201ENST00000248958 SYCP1Q15431 976 aa25.48■■□□□ 1.67
SDF2L1-201ENST00000248958 FBXO43Q4G163 708 aa25.48■■□□□ 1.67
SDF2L1-201ENST00000248958 APTXQ7Z2E3 356 aaKnown RBP25.48■■□□□ 1.67
SDF2L1-201ENST00000248958 NEK11Q8NG66 645 aa25.48■■□□□ 1.67
SDF2L1-201ENST00000248958 CCDC26Q8TAB7 109 aa25.48■■□□□ 1.67
SDF2L1-201ENST00000248958 PLD4Q96BZ4 506 aa25.48■■□□□ 1.67
SDF2L1-201ENST00000248958 PCMTD1Q96MG8 357 aaPredicted RBP25.48■■□□□ 1.67
SDF2L1-201ENST00000248958 SPHK2Q9NRA0 654 aa25.48■■□□□ 1.67
SDF2L1-201ENST00000248958 FBXO4Q9UKT5 387 aa25.48■■□□□ 1.67
SDF2L1-201ENST00000248958 HBS1LQ9Y450 684 aaKnown RBP25.48■■□□□ 1.67
SDF2L1-201ENST00000248958 F8VZ95 297 aa25.47■■□□□ 1.67
SDF2L1-201ENST00000248958 PIK3R2O00459 728 aa25.47■■□□□ 1.67
SDF2L1-201ENST00000248958 SCAMP3O14828 347 aaKnown RBP25.47■■□□□ 1.67
SDF2L1-201ENST00000248958 ADH5P11766 374 aa25.47■■□□□ 1.67
SDF2L1-201ENST00000248958 POLR2FP61218 127 aaKnown RBP25.47■■□□□ 1.67
SDF2L1-201ENST00000248958 PPP2R5DQ14738 602 aa25.47■■□□□ 1.67
SDF2L1-201ENST00000248958 FILIP1LQ4L180 1135 aa25.47■■□□□ 1.67
SDF2L1-201ENST00000248958 FSTL4Q6MZW2 842 aa25.47■■□□□ 1.67
SDF2L1-201ENST00000248958 MSANTD2Q6P1R3 559 aa25.47■■□□□ 1.67
SDF2L1-201ENST00000248958 BEND5Q7L4P6 421 aa25.47■■□□□ 1.67
SDF2L1-201ENST00000248958 ATOH1Q92858 354 aaPredicted RBP25.47■■□□□ 1.67
SDF2L1-201ENST00000248958 WBP2Q969T9 261 aa25.47■■□□□ 1.67
SDF2L1-201ENST00000248958 MIS12Q9H081 205 aa25.47■■□□□ 1.67
SDF2L1-201ENST00000248958 FAM207AQ9NSI2 230 aaPredicted RBP25.47■■□□□ 1.67
SDF2L1-201ENST00000248958 SLC12A8A0AV02 714 aa25.46■■□□□ 1.67
SDF2L1-201ENST00000248958 PNMA6AP0CW24 399 aaPredicted RBP25.46■■□□□ 1.67
SDF2L1-201ENST00000248958 ATP1A3P13637 1013 aa25.46■■□□□ 1.67
SDF2L1-201ENST00000248958 CYP11B1P15538 503 aa25.46■■□□□ 1.67
SDF2L1-201ENST00000248958 CCR3P51677 355 aa25.46■■□□□ 1.67
SDF2L1-201ENST00000248958 TPM4P67936 248 aa25.46■■□□□ 1.67
SDF2L1-201ENST00000248958 MTAPQ13126 283 aa25.46■■□□□ 1.67
SDF2L1-201ENST00000248958 PDCLQ13371 301 aa25.46■■□□□ 1.67
SDF2L1-201ENST00000248958 IQCB1Q15051 598 aa25.46■■□□□ 1.67
SDF2L1-201ENST00000248958 PREPLQ4J6C6 727 aaPredicted RBP25.46■■□□□ 1.67
SDF2L1-201ENST00000248958 LY6G5CQ5SRR4 150 aa25.46■■□□□ 1.67
SDF2L1-201ENST00000248958 Q6ZNB5 142 aa25.46■■□□□ 1.67
SDF2L1-201ENST00000248958 SCUBE3Q8IX30 993 aa25.46■■□□□ 1.67
SDF2L1-201ENST00000248958 SPEM1Q8N4L4 309 aa25.46■■□□□ 1.67
SDF2L1-201ENST00000248958 EDEM1Q92611 657 aa25.46■■□□□ 1.67
SDF2L1-201ENST00000248958 PDCL3Q9H2J4 239 aa25.46■■□□□ 1.67
SDF2L1-201ENST00000248958 MYOFQ9NZM1 2061 aa25.45■■□□□ 1.66
SDF2L1-201ENST00000248958 PALM2-AKAP2B1ALY0 433 aaPredicted RBP25.45■■□□□ 1.66
SDF2L1-201ENST00000248958 E5RJQ4 531 aa25.45■■□□□ 1.66
SDF2L1-201ENST00000248958 HOXC11O43248 304 aaPredicted RBP25.45■■□□□ 1.66
SDF2L1-201ENST00000248958 CHKAP35790 457 aa25.45■■□□□ 1.66
SDF2L1-201ENST00000248958 OPRD1P41143 372 aa25.45■■□□□ 1.66
SDF2L1-201ENST00000248958 KLK7P49862 253 aa25.45■■□□□ 1.66
SDF2L1-201ENST00000248958 ZNF528Q3MIS6 628 aa25.45■■□□□ 1.66
SDF2L1-201ENST00000248958 FMNL3Q8IVF7 1028 aa25.45■■□□□ 1.66
SDF2L1-201ENST00000248958 CLEC4CQ8WTT0 213 aa25.45■■□□□ 1.66
SDF2L1-201ENST00000248958 PPP1R13BQ96KQ4 1090 aa25.45■■□□□ 1.66
SDF2L1-201ENST00000248958 SPAG5Q96R06 1193 aa25.45■■□□□ 1.66
SDF2L1-201ENST00000248958 RBM12Q9NTZ6 932 aaKnown RBP25.45■■□□□ 1.66
SDF2L1-201ENST00000248958 CYTH4Q9UIA0 394 aa25.45■■□□□ 1.66
SDF2L1-201ENST00000248958 ATG13O75143 517 aa25.44■■□□□ 1.66
SDF2L1-201ENST00000248958 STAT1P42224 750 aa25.44■■□□□ 1.66
SDF2L1-201ENST00000248958 JAM2P57087 298 aa25.44■■□□□ 1.66
SDF2L1-201ENST00000248958 GAB4Q2WGN9 574 aa25.44■■□□□ 1.66
SDF2L1-201ENST00000248958 ZNF677Q86XU0 584 aa25.44■■□□□ 1.66
SDF2L1-201ENST00000248958 WDTC1Q8N5D0 677 aa25.44■■□□□ 1.66
SDF2L1-201ENST00000248958 TMEM35BQ8NCS4 154 aa25.44■■□□□ 1.66
SDF2L1-201ENST00000248958 FAM149B1Q96BN6 582 aa25.44■■□□□ 1.66
SDF2L1-201ENST00000248958 PRMT8Q9NR22 394 aaPredicted RBP25.44■■□□□ 1.66
SDF2L1-201ENST00000248958 MARK1Q9P0L2 795 aa25.44■■□□□ 1.66
SDF2L1-201ENST00000248958 WDR35Q9P2L0 1181 aa25.44■■□□□ 1.66
SDF2L1-201ENST00000248958 PAPSS1O43252 624 aaPredicted RBP25.43■■□□□ 1.66
SDF2L1-201ENST00000248958 EGFP01133 1207 aa25.43■■□□□ 1.66
SDF2L1-201ENST00000248958 HMBSP08397 361 aa25.43■■□□□ 1.66
SDF2L1-201ENST00000248958 CORO1AP31146 461 aaKnown RBP25.43■■□□□ 1.66
SDF2L1-201ENST00000248958 CDH5P33151 784 aaPredicted RBP25.43■■□□□ 1.66
SDF2L1-201ENST00000248958 SOX5P35711 763 aa25.43■■□□□ 1.66
SDF2L1-201ENST00000248958 HARS2P49590 506 aaKnown RBP25.43■■□□□ 1.66
SDF2L1-201ENST00000248958 TRIP4Q15650 581 aaPredicted RBP25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms