RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 MYLPFQ96A32 169 aa24.33■■□□□ 1.48
SYNGR3-201ENST00000248121 RNF157Q96PX1 679 aa24.33■■□□□ 1.48
SYNGR3-201ENST00000248121 TBCBQ99426 244 aa24.33■■□□□ 1.48
SYNGR3-201ENST00000248121 PCDH9Q9HC56 1237 aa24.33■■□□□ 1.48
SYNGR3-201ENST00000248121 PCDH18Q9HCL0 1135 aa24.33■■□□□ 1.48
SYNGR3-201ENST00000248121 MDM4O15151 490 aa24.32■■□□□ 1.48
SYNGR3-201ENST00000248121 SHOX2O60902 331 aaPredicted RBP24.32■■□□□ 1.48
SYNGR3-201ENST00000248121 CAPN2P17655 700 aa24.32■■□□□ 1.48
SYNGR3-201ENST00000248121 GPS1Q13098 491 aa24.32■■□□□ 1.48
SYNGR3-201ENST00000248121 IKBKEQ14164 716 aa24.32■■□□□ 1.48
SYNGR3-201ENST00000248121 TRMT10CQ7L0Y3 403 aaKnown RBP24.32■■□□□ 1.48
SYNGR3-201ENST00000248121 ZMIZ2Q8NF64 920 aa24.32■■□□□ 1.48
SYNGR3-201ENST00000248121 KCNK16Q96T55 309 aa24.32■■□□□ 1.48
SYNGR3-201ENST00000248121 GPR62Q9BZJ7 368 aa24.32■■□□□ 1.48
SYNGR3-201ENST00000248121 PCDHB8Q9UN66 801 aa24.32■■□□□ 1.48
SYNGR3-201ENST00000248121 CAPN15O75808 1086 aa24.31■■□□□ 1.48
SYNGR3-201ENST00000248121 MAP3K7CLP57077 242 aa24.31■■□□□ 1.48
SYNGR3-201ENST00000248121 PDK2Q15119 407 aa24.31■■□□□ 1.48
SYNGR3-201ENST00000248121 INTS6LQ5JSJ4 861 aaKnown RBP24.31■■□□□ 1.48
SYNGR3-201ENST00000248121 AGBL2Q5U5Z8 902 aa24.31■■□□□ 1.48
SYNGR3-201ENST00000248121 FAM117BQ6P1L5 589 aa24.31■■□□□ 1.48
SYNGR3-201ENST00000248121 KDM7AQ6ZMT4 941 aa24.31■■□□□ 1.48
SYNGR3-201ENST00000248121 PQLC3Q8N755 202 aa24.31■■□□□ 1.48
SYNGR3-201ENST00000248121 MYCBPAPQ8TBZ2 947 aa24.31■■□□□ 1.48
SYNGR3-201ENST00000248121 SMOQ99835 787 aa24.31■■□□□ 1.48
SYNGR3-201ENST00000248121 MAGEB5Q9BZ81 275 aa24.31■■□□□ 1.48
SYNGR3-201ENST00000248121 KIAA0355O15063 1070 aa24.31■■□□□ 1.48
SYNGR3-201ENST00000248121 IFNB1P01574 187 aa24.31■■□□□ 1.48
SYNGR3-201ENST00000248121 NR1D1P20393 614 aa24.31■■□□□ 1.48
SYNGR3-201ENST00000248121 KRT81Q14533 505 aa24.31■■□□□ 1.48
SYNGR3-201ENST00000248121 GPRIN1Q7Z2K8 1008 aa24.31■■□□□ 1.48
SYNGR3-201ENST00000248121 UBE2Q1Q7Z7E8 422 aa24.31■■□□□ 1.48
SYNGR3-201ENST00000248121 METTL23Q86XA0 190 aa24.31■■□□□ 1.48
SYNGR3-201ENST00000248121 UNC45BQ8IWX7 931 aa24.31■■□□□ 1.48
SYNGR3-201ENST00000248121 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP24.31■■□□□ 1.48
SYNGR3-201ENST00000248121 ADAM28Q9UKQ2 775 aa24.31■■□□□ 1.48
SYNGR3-201ENST00000248121 TADA2AO75478 443 aa24.3■■□□□ 1.48
SYNGR3-201ENST00000248121 FAM200BP0CF97 657 aa24.3■■□□□ 1.48
SYNGR3-201ENST00000248121 RAG1P15918 1043 aa24.3■■□□□ 1.48
SYNGR3-201ENST00000248121 PCSK1P29120 753 aa24.3■■□□□ 1.48
SYNGR3-201ENST00000248121 ATP1A2P50993 1020 aa24.3■■□□□ 1.48
SYNGR3-201ENST00000248121 MRPS5P82675 430 aaKnown RBP24.3■■□□□ 1.48
SYNGR3-201ENST00000248121 EFHC1Q5JVL4 640 aa24.3■■□□□ 1.48
SYNGR3-201ENST00000248121 OTUD1Q5VV17 481 aaPredicted RBP24.3■■□□□ 1.48
SYNGR3-201ENST00000248121 DEFB106AQ8N104 65 aa24.3■■□□□ 1.48
SYNGR3-201ENST00000248121 PCDH19Q8TAB3 1148 aa24.3■■□□□ 1.48
SYNGR3-201ENST00000248121 ACBD6Q9BR61 282 aa24.3■■□□□ 1.48
SYNGR3-201ENST00000248121 PATJQ8NI35 1801 aa24.3■■□□□ 1.48
SYNGR3-201ENST00000248121 MATKP42679 507 aa24.3■■□□□ 1.48
SYNGR3-201ENST00000248121 SLC8A3P57103 927 aa24.3■■□□□ 1.48
SYNGR3-201ENST00000248121 EIF3EP60228 445 aaKnown RBP24.3■■□□□ 1.48
SYNGR3-201ENST00000248121 PITX1P78337 314 aaPredicted RBP24.3■■□□□ 1.48
SYNGR3-201ENST00000248121 YWHAHQ04917 246 aaPredicted RBP24.3■■□□□ 1.48
SYNGR3-201ENST00000248121 NOMO1Q15155 1222 aa24.3■■□□□ 1.48
SYNGR3-201ENST00000248121 FAM171BQ6P995 826 aa24.3■■□□□ 1.48
SYNGR3-201ENST00000248121 ZCCHC9Q8N567 271 aaKnown RBP24.3■■□□□ 1.48
SYNGR3-201ENST00000248121 PLD5Q8N7P1 536 aa24.3■■□□□ 1.48
SYNGR3-201ENST00000248121 SPATA18Q8TC71 538 aa24.3■■□□□ 1.48
SYNGR3-201ENST00000248121 NCAPGQ9BPX3 1015 aa24.3■■□□□ 1.48
SYNGR3-201ENST00000248121 MAK16Q9BXY0 300 aaKnown RBP24.3■■□□□ 1.48
SYNGR3-201ENST00000248121 TSPYL1Q9H0U9 437 aa24.3■■□□□ 1.48
SYNGR3-201ENST00000248121 BCCIPQ9P287 314 aaKnown RBP eCLIP24.3■■□□□ 1.48
SYNGR3-201ENST00000248121 DSEQ9UL01 958 aa24.3■■□□□ 1.48
SYNGR3-201ENST00000248121 TPX2Q9ULW0 747 aaKnown RBP24.3■■□□□ 1.48
SYNGR3-201ENST00000248121 AP1G2O75843 785 aa24.29■■□□□ 1.48
SYNGR3-201ENST00000248121 ACSL3O95573 720 aa24.29■■□□□ 1.48
SYNGR3-201ENST00000248121 GALTP07902 379 aa24.29■■□□□ 1.48
SYNGR3-201ENST00000248121 TYMPP19971 482 aa24.29■■□□□ 1.48
SYNGR3-201ENST00000248121 ANKRD20A8PQ5CZ79 823 aa24.29■■□□□ 1.48
SYNGR3-201ENST00000248121 ERMARDQ5T6L9 678 aa24.29■■□□□ 1.48
SYNGR3-201ENST00000248121 RNASEH2BQ5TBB1 312 aaKnown RBP24.29■■□□□ 1.48
SYNGR3-201ENST00000248121 B4GALNT4Q76KP1 1039 aa24.29■■□□□ 1.48
SYNGR3-201ENST00000248121 MAP7D3Q8IWC1 876 aa24.29■■□□□ 1.48
SYNGR3-201ENST00000248121 CCDC185Q8N715 623 aa24.29■■□□□ 1.48
SYNGR3-201ENST00000248121 FAF2Q96CS3 445 aa24.29■■□□□ 1.48
SYNGR3-201ENST00000248121 TMEM109Q9BVC6 243 aa24.29■■□□□ 1.48
SYNGR3-201ENST00000248121 MTMR10Q9NXD2 777 aa24.29■■□□□ 1.48
SYNGR3-201ENST00000248121 NOVA2Q9UNW9 492 aaKnown RBP24.29■■□□□ 1.48
SYNGR3-201ENST00000248121 KIAA1671Q9BY89 1806 aa24.28■■□□□ 1.48
SYNGR3-201ENST00000248121 DGKIO75912 1065 aa24.28■■□□□ 1.48
SYNGR3-201ENST00000248121 TTC4O95801 387 aa24.28■■□□□ 1.48
SYNGR3-201ENST00000248121 RBP3P10745 1247 aa24.28■■□□□ 1.48
SYNGR3-201ENST00000248121 L1CAMP32004 1257 aa24.28■■□□□ 1.48
SYNGR3-201ENST00000248121 TFDP2Q14188 446 aa24.28■■□□□ 1.48
SYNGR3-201ENST00000248121 KYNUQ16719 465 aa24.28■■□□□ 1.48
SYNGR3-201ENST00000248121 HFE2Q6ZVN8 426 aa24.28■■□□□ 1.48
SYNGR3-201ENST00000248121 VSIG1Q86XK7 387 aa24.28■■□□□ 1.48
SYNGR3-201ENST00000248121 CEP57Q86XR8 500 aa24.28■■□□□ 1.48
SYNGR3-201ENST00000248121 RELL1Q8IUW5 271 aa24.28■■□□□ 1.48
SYNGR3-201ENST00000248121 FAM149B1Q96BN6 582 aa24.28■■□□□ 1.48
SYNGR3-201ENST00000248121 TLCD1Q96CP7 247 aa24.28■■□□□ 1.48
SYNGR3-201ENST00000248121 LRRC4Q9HBW1 653 aa24.28■■□□□ 1.48
SYNGR3-201ENST00000248121 NINJ2Q9NZG7 142 aa24.28■■□□□ 1.48
SYNGR3-201ENST00000248121 ERICH4A6NGS2 130 aa24.28■■□□□ 1.48
SYNGR3-201ENST00000248121 HOXA2O43364 376 aa24.28■■□□□ 1.48
SYNGR3-201ENST00000248121 DAB1O75553 588 aa24.28■■□□□ 1.48
SYNGR3-201ENST00000248121 DESP17661 470 aa24.28■■□□□ 1.48
SYNGR3-201ENST00000248121 BDNFP23560 247 aa24.28■■□□□ 1.48
SYNGR3-201ENST00000248121 RFC2P35250 354 aa24.28■■□□□ 1.48
SYNGR3-201ENST00000248121 TKTL1P51854 596 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms