RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 OSBPL8Q9BZF1 889 aa13.79□□□□□ -0.2
SLIRP-201ENST00000238688 TRIM7Q9C029 511 aa13.79□□□□□ -0.2
SLIRP-201ENST00000238688 STK39Q9UEW8 545 aa13.79□□□□□ -0.2
SLIRP-201ENST00000238688 STAP1Q9ULZ2 295 aa13.79□□□□□ -0.2
SLIRP-201ENST00000238688 FAN1Q9Y2M0 1017 aa13.79□□□□□ -0.2
SLIRP-201ENST00000238688 NME7Q9Y5B8 376 aa13.79□□□□□ -0.2
SLIRP-201ENST00000238688 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.78□□□□□ -0.2
SLIRP-201ENST00000238688 CASTOR2A6NHX0 329 aa13.78□□□□□ -0.2
SLIRP-201ENST00000238688 PAPSS1O43252 624 aaPredicted RBP13.78□□□□□ -0.2
SLIRP-201ENST00000238688 ALDH2P05091 517 aa13.78□□□□□ -0.2
SLIRP-201ENST00000238688 PDGFRBP09619 1106 aa13.78□□□□□ -0.2
SLIRP-201ENST00000238688 MARCKSL1P49006 195 aa13.78□□□□□ -0.2
SLIRP-201ENST00000238688 DR1Q01658 176 aa13.78□□□□□ -0.2
SLIRP-201ENST00000238688 YWHAHQ04917 246 aaPredicted RBP13.78□□□□□ -0.2
SLIRP-201ENST00000238688 ORC1Q13415 861 aa13.78□□□□□ -0.2
SLIRP-201ENST00000238688 C2CD6Q53TS8 623 aa13.78□□□□□ -0.2
SLIRP-201ENST00000238688 RAB41Q5JT25 222 aa13.78□□□□□ -0.2
SLIRP-201ENST00000238688 SPDYCQ5MJ68 293 aa13.78□□□□□ -0.2
SLIRP-201ENST00000238688 CEP128Q6ZU80 1094 aa13.78□□□□□ -0.2
SLIRP-201ENST00000238688 FAM35AQ86V20 835 aa13.78□□□□□ -0.2
SLIRP-201ENST00000238688 SIX6OS1Q8N1H7 587 aa13.78□□□□□ -0.2
SLIRP-201ENST00000238688 C12orf76Q8N812 135 aaPredicted RBP13.78□□□□□ -0.2
SLIRP-201ENST00000238688 PRELID2Q8N945 189 aa13.78□□□□□ -0.2
SLIRP-201ENST00000238688 CMASQ8NFW8 434 aaPredicted RBP13.78□□□□□ -0.2
SLIRP-201ENST00000238688 CENPIQ92674 756 aaPredicted RBP13.78□□□□□ -0.2
SLIRP-201ENST00000238688 KLHL5Q96PQ7 755 aa13.78□□□□□ -0.2
SLIRP-201ENST00000238688 SLITRK1Q96PX8 696 aa13.78□□□□□ -0.2
SLIRP-201ENST00000238688 ADAM7Q9H2U9 754 aa13.78□□□□□ -0.2
SLIRP-201ENST00000238688 DPEP3Q9H4B8 488 aa13.78□□□□□ -0.2
SLIRP-201ENST00000238688 LRRC4Q9HBW1 653 aa13.78□□□□□ -0.2
SLIRP-201ENST00000238688 RCOR3Q9P2K3 495 aaPredicted RBP13.78□□□□□ -0.2
SLIRP-201ENST00000238688 CHORDC1Q9UHD1 332 aaPredicted RBP13.78□□□□□ -0.2
SLIRP-201ENST00000238688 OR6C75A6NL08 312 aa13.77□□□□□ -0.21
SLIRP-201ENST00000238688 F8VP50 259 aa13.77□□□□□ -0.21
SLIRP-201ENST00000238688 RAD51CO43502 376 aa13.77□□□□□ -0.21
SLIRP-201ENST00000238688 PRPSAP2O60256 369 aa13.77□□□□□ -0.21
SLIRP-201ENST00000238688 SF3B1O75533 1304 aaKnown RBP eCLIP13.77□□□□□ -0.21
SLIRP-201ENST00000238688 DAB1O75553 588 aa13.77□□□□□ -0.21
SLIRP-201ENST00000238688 KRT1P04264 644 aa13.77□□□□□ -0.21
SLIRP-201ENST00000238688 CNPP09543 421 aaKnown RBP13.77□□□□□ -0.21
SLIRP-201ENST00000238688 SRGAP2BP0DMP2 458 aa13.77□□□□□ -0.21
SLIRP-201ENST00000238688 CCDC130P13994 396 aa13.77□□□□□ -0.21
SLIRP-201ENST00000238688 MATKP42679 507 aa13.77□□□□□ -0.21
SLIRP-201ENST00000238688 SSR1P43307 286 aaKnown RBP13.77□□□□□ -0.21
SLIRP-201ENST00000238688 TAS2R40P59535 323 aa13.77□□□□□ -0.21
SLIRP-201ENST00000238688 OGDHQ02218 1023 aa13.77□□□□□ -0.21
SLIRP-201ENST00000238688 ZNF211Q13398 564 aaPredicted RBP13.77□□□□□ -0.21
SLIRP-201ENST00000238688 TFDP2Q14188 446 aa13.77□□□□□ -0.21
SLIRP-201ENST00000238688 MDH1BQ5I0G3 518 aa13.77□□□□□ -0.21
SLIRP-201ENST00000238688 CD300LGQ6UXG3 332 aa13.77□□□□□ -0.21
SLIRP-201ENST00000238688 CLEC20AQ6ZU45 233 aa13.77□□□□□ -0.21
SLIRP-201ENST00000238688 PIGZQ86VD9 579 aa13.77□□□□□ -0.21
SLIRP-201ENST00000238688 CCDC50Q8IVM0 306 aa13.77□□□□□ -0.21
SLIRP-201ENST00000238688 KMT2EQ8IZD2 1858 aa13.77□□□□□ -0.21
SLIRP-201ENST00000238688 MREGQ8N565 214 aa13.77□□□□□ -0.21
SLIRP-201ENST00000238688 BBOF1Q8ND07 529 aa13.77□□□□□ -0.21
SLIRP-201ENST00000238688 C3orf58Q8NDZ4 430 aa13.77□□□□□ -0.21
SLIRP-201ENST00000238688 AENQ8WTP8 325 aaKnown RBP13.77□□□□□ -0.21
SLIRP-201ENST00000238688 C2orf15Q8WU43 125 aaKnown RBP13.77□□□□□ -0.21
SLIRP-201ENST00000238688 RXFP2Q8WXD0 754 aa13.77□□□□□ -0.21
SLIRP-201ENST00000238688 EDAQ92838 391 aa13.77□□□□□ -0.21
SLIRP-201ENST00000238688 MAGOHBQ96A72 148 aaKnown RBP13.77□□□□□ -0.21
SLIRP-201ENST00000238688 PKMYT1Q99640 499 aa13.77□□□□□ -0.21
SLIRP-201ENST00000238688 ERP44Q9BS26 406 aa13.77□□□□□ -0.21
SLIRP-201ENST00000238688 MED10Q9BTT4 135 aa13.77□□□□□ -0.21
SLIRP-201ENST00000238688 DDX23Q9BUQ8 820 aaKnown RBP13.77□□□□□ -0.21
SLIRP-201ENST00000238688 AP1M1Q9BXS5 423 aa13.77□□□□□ -0.21
SLIRP-201ENST00000238688 DDX47Q9H0S4 455 aaKnown RBP13.77□□□□□ -0.21
SLIRP-201ENST00000238688 POMKQ9H5K3 350 aa13.77□□□□□ -0.21
SLIRP-201ENST00000238688 DMAP1Q9NPF5 467 aaPredicted RBP13.77□□□□□ -0.21
SLIRP-201ENST00000238688 CRTAC1Q9NQ79 661 aa13.77□□□□□ -0.21
SLIRP-201ENST00000238688 KRT82Q9NSB4 513 aa13.77□□□□□ -0.21
SLIRP-201ENST00000238688 EHD2Q9NZN4 543 aa13.77□□□□□ -0.21
SLIRP-201ENST00000238688 DMGDHQ9UI17 866 aaKnown RBP13.77□□□□□ -0.21
SLIRP-201ENST00000238688 USP18Q9UMW8 372 aa13.77□□□□□ -0.21
SLIRP-201ENST00000238688 PRG3Q9Y2Y8 225 aaPredicted RBP13.77□□□□□ -0.21
SLIRP-201ENST00000238688 ARIH1Q9Y4X5 557 aaPredicted RBP13.77□□□□□ -0.21
SLIRP-201ENST00000238688 H7C4K7 107 aa13.76□□□□□ -0.21
SLIRP-201ENST00000238688 MAP2K7O14733 419 aa13.76□□□□□ -0.21
SLIRP-201ENST00000238688 ECEL1O95672 775 aa13.76□□□□□ -0.21
SLIRP-201ENST00000238688 SOD2P04179 222 aa13.76□□□□□ -0.21
SLIRP-201ENST00000238688 ADORA2BP29275 332 aa13.76□□□□□ -0.21
SLIRP-201ENST00000238688 NOS2P35228 1153 aa13.76□□□□□ -0.21
SLIRP-201ENST00000238688 RDXP35241 583 aaKnown RBP13.76□□□□□ -0.21
SLIRP-201ENST00000238688 COILP38432 576 aaPredicted RBP13.76□□□□□ -0.21
SLIRP-201ENST00000238688 CLCN4P51793 760 aa13.76□□□□□ -0.21
SLIRP-201ENST00000238688 YWHAZP63104 245 aaKnown RBP13.76□□□□□ -0.21
SLIRP-201ENST00000238688 CAV1Q03135 178 aa13.76□□□□□ -0.21
SLIRP-201ENST00000238688 SIX1Q15475 284 aaPredicted RBP13.76□□□□□ -0.21
SLIRP-201ENST00000238688 KIAA0319Q5VV43 1072 aa13.76□□□□□ -0.21
SLIRP-201ENST00000238688 CCDC137Q6PK04 289 aaKnown RBP13.76□□□□□ -0.21
SLIRP-201ENST00000238688 VSTM1Q6UX27 236 aa13.76□□□□□ -0.21
SLIRP-201ENST00000238688 SPOCD1Q6ZMY3 1216 aa13.76□□□□□ -0.21
SLIRP-201ENST00000238688 HFE2Q6ZVN8 426 aa13.76□□□□□ -0.21
SLIRP-201ENST00000238688 KLHL7Q8IXQ5 586 aa13.76□□□□□ -0.21
SLIRP-201ENST00000238688 ATL2Q8NHH9 583 aa13.76□□□□□ -0.21
SLIRP-201ENST00000238688 JOSD2Q8TAC2 188 aa13.76□□□□□ -0.21
SLIRP-201ENST00000238688 FAM71BQ8TC56 605 aa13.76□□□□□ -0.21
SLIRP-201ENST00000238688 NT5C3BQ969T7 300 aa13.76□□□□□ -0.21
SLIRP-201ENST00000238688 LRRC45Q96CN5 670 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms