RNA–Protein interactions for RNA: ENST00000238628.10

IFT43-201, Transcript of intraflagellar transport 43, humanhuman

TSL 1 (best) BASIC

Gene IFT43, Length 816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-201ENST00000238628 GARTP22102 1010 aa8.85□□□□□ -0.99
IFT43-201ENST00000238628 GRK6P43250 576 aa8.85□□□□□ -0.99
IFT43-201ENST00000238628 NFKB2Q00653 900 aa8.85□□□□□ -0.99
IFT43-201ENST00000238628 GRIN1Q05586 938 aa8.85□□□□□ -0.99
IFT43-201ENST00000238628 IFRD2Q12894 506 aaPredicted RBP8.85□□□□□ -0.99
IFT43-201ENST00000238628 TAF10Q12962 218 aa8.85□□□□□ -0.99
IFT43-201ENST00000238628 SF3A1Q15459 793 aaKnown RBP8.85□□□□□ -0.99
IFT43-201ENST00000238628 LY6G5CQ5SRR4 150 aa8.85□□□□□ -0.99
IFT43-201ENST00000238628 L1TD1Q5T7N2 865 aaKnown RBP8.85□□□□□ -0.99
IFT43-201ENST00000238628 TDRD10Q5VZ19 366 aaKnown RBP8.85□□□□□ -0.99
IFT43-201ENST00000238628 BTBD8Q5XKL5 378 aa8.85□□□□□ -0.99
IFT43-201ENST00000238628 USP49Q70CQ1 688 aa8.85□□□□□ -0.99
IFT43-201ENST00000238628 HS2ST1Q7LGA3 356 aa8.85□□□□□ -0.99
IFT43-201ENST00000238628 TRMT11Q7Z4G4 463 aaKnown RBP8.85□□□□□ -0.99
IFT43-201ENST00000238628 DDX42Q86XP3 938 aaKnown RBP eCLIP8.85□□□□□ -0.99
IFT43-201ENST00000238628 MYCBPAPQ8TBZ2 947 aa8.85□□□□□ -0.99
IFT43-201ENST00000238628 KCNV2Q8TDN2 545 aa8.85□□□□□ -0.99
IFT43-201ENST00000238628 PCED1BQ96HM7 432 aa8.85□□□□□ -0.99
IFT43-201ENST00000238628 HPDLQ96IR7 371 aa8.85□□□□□ -0.99
IFT43-201ENST00000238628 ANKRD36BP1Q96IX9 119 aa8.85□□□□□ -0.99
IFT43-201ENST00000238628 FAM84AQ96KN4 292 aa8.85□□□□□ -0.99
IFT43-201ENST00000238628 SLITRK1Q96PX8 696 aa8.85□□□□□ -0.99
IFT43-201ENST00000238628 MMS19Q96T76 1030 aa8.85□□□□□ -0.99
IFT43-201ENST00000238628 TTLL2Q9BWV7 592 aa8.85□□□□□ -0.99
IFT43-201ENST00000238628 STRA6Q9BX79 667 aa8.85□□□□□ -0.99
IFT43-201ENST00000238628 MTMR12Q9C0I1 747 aa8.85□□□□□ -0.99
IFT43-201ENST00000238628 PDE11AQ9HCR9 933 aa8.85□□□□□ -0.99
IFT43-201ENST00000238628 FTSJ1Q9UET6 329 aa8.85□□□□□ -0.99
IFT43-201ENST00000238628 CCDC39Q9UFE4 941 aa8.85□□□□□ -0.99
IFT43-201ENST00000238628 SIX4Q9UIU6 781 aa8.85□□□□□ -0.99
IFT43-201ENST00000238628 PCDHB13Q9Y5F0 798 aa8.85□□□□□ -0.99
IFT43-201ENST00000238628 MYH10P35580 1976 aa8.84□□□□□ -0.99
IFT43-201ENST00000238628 E2F8A0AVK6 867 aa8.84□□□□□ -0.99
IFT43-201ENST00000238628 F8VP50 259 aa8.84□□□□□ -0.99
IFT43-201ENST00000238628 GCNT3O95395 438 aa8.84□□□□□ -0.99
IFT43-201ENST00000238628 OAS1P00973 400 aaKnown RBP8.84□□□□□ -0.99
IFT43-201ENST00000238628 TNNC2P02585 160 aa8.84□□□□□ -0.99
IFT43-201ENST00000238628 CHRM1P11229 460 aaPredicted RBP8.84□□□□□ -0.99
IFT43-201ENST00000238628 GAP43P17677 238 aa8.84□□□□□ -0.99
IFT43-201ENST00000238628 GJB2P29033 226 aa8.84□□□□□ -0.99
IFT43-201ENST00000238628 GNL1P36915 607 aaPredicted RBP8.84□□□□□ -0.99
IFT43-201ENST00000238628 WASP42768 502 aa8.84□□□□□ -0.99
IFT43-201ENST00000238628 PCBP4P57723 403 aaKnown RBP8.84□□□□□ -0.99
IFT43-201ENST00000238628 NOP14P78316 857 aaKnown RBP8.84□□□□□ -0.99
IFT43-201ENST00000238628 SURF1Q15526 300 aa8.84□□□□□ -0.99
IFT43-201ENST00000238628 MDH1BQ5I0G3 518 aa8.84□□□□□ -0.99
IFT43-201ENST00000238628 HES3Q5TGS1 186 aa8.84□□□□□ -0.99
IFT43-201ENST00000238628 KIAA1614Q5VZ46 1190 aa8.84□□□□□ -0.99
IFT43-201ENST00000238628 SDE2Q6IQ49 451 aa8.84□□□□□ -0.99
IFT43-201ENST00000238628 GPD1LQ8N335 351 aa8.84□□□□□ -0.99
IFT43-201ENST00000238628 PHTF2Q8N3S3 785 aa8.84□□□□□ -0.99
IFT43-201ENST00000238628 KBTBD7Q8WVZ9 684 aa8.84□□□□□ -0.99
IFT43-201ENST00000238628 OTUB2Q96DC9 234 aa8.84□□□□□ -0.99
IFT43-201ENST00000238628 LIN37Q96GY3 246 aaPredicted RBP8.84□□□□□ -0.99
IFT43-201ENST00000238628 C8orf48Q96LL4 319 aa8.84□□□□□ -0.99
IFT43-201ENST00000238628 SNX25Q9H3E2 840 aa8.84□□□□□ -0.99
IFT43-201ENST00000238628 INTS13Q9NVM9 706 aa8.84□□□□□ -0.99
IFT43-201ENST00000238628 DEC1Q9P2X7 70 aa8.84□□□□□ -0.99
IFT43-201ENST00000238628 SEL1LQ9UBV2 794 aa8.84□□□□□ -0.99
IFT43-201ENST00000238628 SH3BP1Q9Y3L3 701 aa8.84□□□□□ -0.99
IFT43-201ENST00000238628 PCDHGA1Q9Y5H4 931 aa8.84□□□□□ -0.99
IFT43-201ENST00000238628 LRRK2Q5S007 2527 aa8.84□□□□□ -0.99
IFT43-201ENST00000238628 BCAT2O15382 392 aaPredicted RBP8.83□□□□□ -1
IFT43-201ENST00000238628 KLK10O43240 276 aa8.83□□□□□ -1
IFT43-201ENST00000238628 TULP3O75386 442 aa8.83□□□□□ -1
IFT43-201ENST00000238628 PRPF6O94906 941 aaKnown RBP8.83□□□□□ -1
IFT43-201ENST00000238628 BMP15O95972 392 aa8.83□□□□□ -1
IFT43-201ENST00000238628 CDK4P11802 303 aa8.83□□□□□ -1
IFT43-201ENST00000238628 HOXB2P14652 356 aa8.83□□□□□ -1
IFT43-201ENST00000238628 IDEP14735 1019 aa8.83□□□□□ -1
IFT43-201ENST00000238628 WARSP23381 471 aaKnown RBP8.83□□□□□ -1
IFT43-201ENST00000238628 YWHAQP27348 245 aa8.83□□□□□ -1
IFT43-201ENST00000238628 NTSR1P30989 418 aa8.83□□□□□ -1
IFT43-201ENST00000238628 BNC1Q01954 994 aa8.83□□□□□ -1
IFT43-201ENST00000238628 DUOXA2Q1HG44 320 aa8.83□□□□□ -1
IFT43-201ENST00000238628 ANO4Q32M45 955 aa8.83□□□□□ -1
IFT43-201ENST00000238628 C10orf76Q5T2E6 689 aa8.83□□□□□ -1
IFT43-201ENST00000238628 HIST2H2BCQ6DN03 193 aa8.83□□□□□ -1
IFT43-201ENST00000238628 SV2BQ7L1I2 683 aa8.83□□□□□ -1
IFT43-201ENST00000238628 LIMS2Q7Z4I7 341 aa8.83□□□□□ -1
IFT43-201ENST00000238628 OR5B17Q8NGF7 314 aa8.83□□□□□ -1
IFT43-201ENST00000238628 OR6B3Q8NGW1 331 aa8.83□□□□□ -1
IFT43-201ENST00000238628 DNASE2BQ8WZ79 361 aa8.83□□□□□ -1
IFT43-201ENST00000238628 TSC1Q92574 1164 aa8.83□□□□□ -1
IFT43-201ENST00000238628 EPSTI1Q96J88 318 aa8.83□□□□□ -1
IFT43-201ENST00000238628 MRPL45Q9BRJ2 306 aaKnown RBP8.83□□□□□ -1
IFT43-201ENST00000238628 CBWD1Q9BRT8 395 aa8.83□□□□□ -1
IFT43-201ENST00000238628 HSPBP1Q9NZL4 362 aa8.83□□□□□ -1
IFT43-201ENST00000238628 CHORDC1Q9UHD1 332 aaPredicted RBP8.83□□□□□ -1
IFT43-201ENST00000238628 CACNA1DQ01668 2161 aa8.83□□□□□ -1
IFT43-201ENST00000238628 A0A1B0GVT2 93 aa8.82□□□□□ -1
IFT43-201ENST00000238628 ZNF233A6NK53 670 aa8.82□□□□□ -1
IFT43-201ENST00000238628 KIAA0391O15091 583 aaKnown RBP8.82□□□□□ -1
IFT43-201ENST00000238628 COCHO43405 550 aa8.82□□□□□ -1
IFT43-201ENST00000238628 SUV39H1O43463 412 aa8.82□□□□□ -1
IFT43-201ENST00000238628 RFPL3O75679 317 aa8.82□□□□□ -1
IFT43-201ENST00000238628 RTN3O95197 1032 aaPredicted RBP8.82□□□□□ -1
IFT43-201ENST00000238628 CST3P01034 146 aaPredicted RBP8.82□□□□□ -1
IFT43-201ENST00000238628 FAM163BP0C2L3 166 aa8.82□□□□□ -1
IFT43-201ENST00000238628 PTPN1P18031 435 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms