RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 TBX3O15119 743 aa13.58□□□□□ -0.24
NEK9-201ENST00000238616 CRTAMO95727 393 aa13.58□□□□□ -0.24
NEK9-201ENST00000238616 PABPC1P11940 636 aaKnown RBP13.58□□□□□ -0.24
NEK9-201ENST00000238616 MAGEA4P43358 317 aa13.58□□□□□ -0.24
NEK9-201ENST00000238616 IL5RAQ01344 420 aa13.58□□□□□ -0.24
NEK9-201ENST00000238616 MTF1Q14872 753 aa13.58□□□□□ -0.24
NEK9-201ENST00000238616 SPPL2AQ8TCT8 520 aa13.58□□□□□ -0.24
NEK9-201ENST00000238616 OSBPL8Q9BZF1 889 aa13.58□□□□□ -0.24
NEK9-201ENST00000238616 ZCCHC17Q9NP64 241 aaKnown RBP13.58□□□□□ -0.24
NEK9-201ENST00000238616 TLR8Q9NR97 1041 aaKnown RBP13.58□□□□□ -0.24
NEK9-201ENST00000238616 SNX13Q9Y5W8 968 aa13.58□□□□□ -0.24
NEK9-201ENST00000238616 NUP153P49790 1475 aaKnown RBP13.58□□□□□ -0.24
NEK9-201ENST00000238616 EFL1Q7Z2Z2 1120 aaKnown RBP13.58□□□□□ -0.24
NEK9-201ENST00000238616 REXO5Q96IC2 774 aaKnown RBP13.58□□□□□ -0.24
NEK9-201ENST00000238616 MTA2O94776 668 aa13.57□□□□□ -0.24
NEK9-201ENST00000238616 TSNQ15631 228 aaKnown RBP13.57□□□□□ -0.24
NEK9-201ENST00000238616 CDH24Q86UP0 819 aa13.57□□□□□ -0.24
NEK9-201ENST00000238616 PROSER1Q86XN7 944 aa13.57□□□□□ -0.24
NEK9-201ENST00000238616 OR2W6PQ8NHA6 318 aa13.57□□□□□ -0.24
NEK9-201ENST00000238616 SLC4A9Q96Q91 983 aa13.57□□□□□ -0.24
NEK9-201ENST00000238616 SEPHS2Q99611 448 aa13.57□□□□□ -0.24
NEK9-201ENST00000238616 TRIT1Q9H3H1 467 aaKnown RBP13.57□□□□□ -0.24
NEK9-201ENST00000238616 AP4E1Q9UPM8 1137 aa13.57□□□□□ -0.24
NEK9-201ENST00000238616 TTC3P53804 2025 aa13.57□□□□□ -0.24
NEK9-201ENST00000238616 PDHA2P29803 388 aa13.57□□□□□ -0.24
NEK9-201ENST00000238616 GALCP54803 685 aa13.57□□□□□ -0.24
NEK9-201ENST00000238616 NFYCQ13952 458 aa13.57□□□□□ -0.24
NEK9-201ENST00000238616 MAPK11Q15759 364 aa13.57□□□□□ -0.24
NEK9-201ENST00000238616 KCNT1Q5JUK3 1230 aa13.57□□□□□ -0.24
NEK9-201ENST00000238616 SAMD7Q7Z3H4 446 aa13.57□□□□□ -0.24
NEK9-201ENST00000238616 SLC20A1Q8WUM9 679 aa13.57□□□□□ -0.24
NEK9-201ENST00000238616 CLEC4MQ9H2X3 399 aaPredicted RBP13.57□□□□□ -0.24
NEK9-201ENST00000238616 LRRC4BQ9NT99 713 aa13.57□□□□□ -0.24
NEK9-201ENST00000238616 KDM6AO15550 1401 aaPredicted RBP13.57□□□□□ -0.24
NEK9-201ENST00000238616 TMEM120BA0PK00 339 aa13.57□□□□□ -0.24
NEK9-201ENST00000238616 TRIM3O75382 744 aaPredicted RBP13.57□□□□□ -0.24
NEK9-201ENST00000238616 OXCT1P55809 520 aa13.57□□□□□ -0.24
NEK9-201ENST00000238616 ORC2Q13416 577 aaPredicted RBP13.57□□□□□ -0.24
NEK9-201ENST00000238616 FAM171BQ6P995 826 aa13.57□□□□□ -0.24
NEK9-201ENST00000238616 TMC5Q6UXY8 1006 aa13.57□□□□□ -0.24
NEK9-201ENST00000238616 TAF8Q7Z7C8 310 aa13.57□□□□□ -0.24
NEK9-201ENST00000238616 ZKSCAN4Q969J2 545 aaPredicted RBP13.57□□□□□ -0.24
NEK9-201ENST00000238616 SERPINB12Q96P63 405 aa13.57□□□□□ -0.24
NEK9-201ENST00000238616 SLITRK2Q9H156 845 aa13.57□□□□□ -0.24
NEK9-201ENST00000238616 ZNHIT2Q9UHR6 403 aa13.57□□□□□ -0.24
NEK9-201ENST00000238616 EIF3DO15371 548 aaKnown RBP eCLIP13.57□□□□□ -0.24
NEK9-201ENST00000238616 HS6ST1O60243 411 aa13.57□□□□□ -0.24
NEK9-201ENST00000238616 CNOT3O75175 753 aaKnown RBP13.57□□□□□ -0.24
NEK9-201ENST00000238616 ALDH2P05091 517 aa13.57□□□□□ -0.24
NEK9-201ENST00000238616 RHOAP61586 193 aa13.57□□□□□ -0.24
NEK9-201ENST00000238616 DMPKQ09013 629 aa13.57□□□□□ -0.24
NEK9-201ENST00000238616 C2CD6Q53TS8 623 aa13.57□□□□□ -0.24
NEK9-201ENST00000238616 TRPM8Q7Z2W7 1104 aa13.57□□□□□ -0.24
NEK9-201ENST00000238616 FAM20CQ8IXL6 584 aa13.57□□□□□ -0.24
NEK9-201ENST00000238616 ARRDC4Q8NCT1 418 aa13.57□□□□□ -0.24
NEK9-201ENST00000238616 E2F7Q96AV8 911 aa13.57□□□□□ -0.24
NEK9-201ENST00000238616 FAM111AQ96PZ2 611 aa13.57□□□□□ -0.24
NEK9-201ENST00000238616 TUBGCP4Q9UGJ1 667 aa13.57□□□□□ -0.24
NEK9-201ENST00000238616 CDH16O75309 829 aa13.57□□□□□ -0.24
NEK9-201ENST00000238616 GLP2RO95838 553 aa13.57□□□□□ -0.24
NEK9-201ENST00000238616 OR1E1P30953 314 aa13.57□□□□□ -0.24
NEK9-201ENST00000238616 OVGP1Q12889 678 aa13.57□□□□□ -0.24
NEK9-201ENST00000238616 CASP12Q6UXS9 341 aa13.57□□□□□ -0.24
NEK9-201ENST00000238616 AGMOQ6ZNB7 445 aa13.57□□□□□ -0.24
NEK9-201ENST00000238616 ITIH5Q86UX2 942 aa13.57□□□□□ -0.24
NEK9-201ENST00000238616 C19orf81C9J6K1 198 aa13.57□□□□□ -0.24
NEK9-201ENST00000238616 HBP1O60381 514 aa13.57□□□□□ -0.24
NEK9-201ENST00000238616 AMD1P17707 334 aa13.57□□□□□ -0.24
NEK9-201ENST00000238616 MAPK1P28482 360 aa13.57□□□□□ -0.24
NEK9-201ENST00000238616 MRPS35P82673 323 aaKnown RBP13.57□□□□□ -0.24
NEK9-201ENST00000238616 TDRD5Q8NAT2 981 aaKnown RBP13.57□□□□□ -0.24
NEK9-201ENST00000238616 C1QTNF7Q9BXJ2 289 aa13.57□□□□□ -0.24
NEK9-201ENST00000238616 POLR1BQ9H9Y6 1135 aa13.57□□□□□ -0.24
NEK9-201ENST00000238616 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.57□□□□□ -0.24
NEK9-201ENST00000238616 PTPRTO14522 1441 aa13.57□□□□□ -0.24
NEK9-201ENST00000238616 SLC12A8A0AV02 714 aa13.56□□□□□ -0.24
NEK9-201ENST00000238616 MEI4A8MW99 385 aa13.56□□□□□ -0.24
NEK9-201ENST00000238616 KHDRBS3O75525 346 aaKnown RBP13.56□□□□□ -0.24
NEK9-201ENST00000238616 PEX5P50542 639 aa13.56□□□□□ -0.24
NEK9-201ENST00000238616 GEMIN4P57678 1058 aaKnown RBP13.56□□□□□ -0.24
NEK9-201ENST00000238616 DNAJC3Q13217 504 aa13.56□□□□□ -0.24
NEK9-201ENST00000238616 FEZF2Q8TBJ5 459 aa13.56□□□□□ -0.24
NEK9-201ENST00000238616 LRRIQ1Q96JM4 1722 aa13.56□□□□□ -0.24
NEK9-201ENST00000238616 C10orf88Q9H8K7 445 aa13.56□□□□□ -0.24
NEK9-201ENST00000238616 ACTR8Q9H981 624 aa13.56□□□□□ -0.24
NEK9-201ENST00000238616 SMPD4Q9NXE4 827 aa13.56□□□□□ -0.24
NEK9-201ENST00000238616 TBKBP1A7MCY6 615 aa13.56□□□□□ -0.24
NEK9-201ENST00000238616 PIK3R1P27986 724 aa13.56□□□□□ -0.24
NEK9-201ENST00000238616 ALG11Q2TAA5 492 aa13.56□□□□□ -0.24
NEK9-201ENST00000238616 TFDP3Q5H9I0 405 aa13.56□□□□□ -0.24
NEK9-201ENST00000238616 CHPFQ8IZ52 775 aa13.56□□□□□ -0.24
NEK9-201ENST00000238616 SRBD1Q8N5C6 995 aaKnown RBP13.56□□□□□ -0.24
NEK9-201ENST00000238616 ENGASEQ8NFI3 743 aa13.56□□□□□ -0.24
NEK9-201ENST00000238616 ZNF671Q8TAW3 534 aa13.56□□□□□ -0.24
NEK9-201ENST00000238616 TBCDQ9BTW9 1192 aa13.56□□□□□ -0.24
NEK9-201ENST00000238616 TIPINQ9BVW5 301 aa13.56□□□□□ -0.24
NEK9-201ENST00000238616 TMEM8AQ9HCN3 771 aa13.56□□□□□ -0.24
NEK9-201ENST00000238616 RPAP1Q9BWH6 1393 aaPredicted RBP13.56□□□□□ -0.24
NEK9-201ENST00000238616 SLC2A4P14672 509 aa13.56□□□□□ -0.24
NEK9-201ENST00000238616 THOP1P52888 689 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms