RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 B4GALNT2Q8NHY0 566 aa16.07■□□□□ 0.16
DDX55-201ENST00000238146 SLC7A3Q8WY07 619 aa16.07■□□□□ 0.16
DDX55-201ENST00000238146 OLFM3Q96PB7 478 aa16.07■□□□□ 0.16
DDX55-201ENST00000238146 MMP19Q99542 508 aa16.07■□□□□ 0.16
DDX55-201ENST00000238146 UBE2OQ9C0C9 1292 aaKnown RBP16.07■□□□□ 0.16
DDX55-201ENST00000238146 SDCBP2Q9H190 292 aa16.07■□□□□ 0.16
DDX55-201ENST00000238146 VWA5AO00534 786 aa16.07■□□□□ 0.16
DDX55-201ENST00000238146 ITM2AO43736 263 aa16.07■□□□□ 0.16
DDX55-201ENST00000238146 ONECUT3O60422 494 aaPredicted RBP16.07■□□□□ 0.16
DDX55-201ENST00000238146 LGR5O75473 907 aa16.07■□□□□ 0.16
DDX55-201ENST00000238146 LYPLA1O75608 230 aaPredicted RBP16.07■□□□□ 0.16
DDX55-201ENST00000238146 GSRP00390 522 aa16.07■□□□□ 0.16
DDX55-201ENST00000238146 OATP04181 439 aa16.07■□□□□ 0.16
DDX55-201ENST00000238146 PABPC4LP0CB38 370 aaKnown RBP16.07■□□□□ 0.16
DDX55-201ENST00000238146 PIM1P11309 404 aaPredicted RBP16.07■□□□□ 0.16
DDX55-201ENST00000238146 UQCRBP14927 111 aa16.07■□□□□ 0.16
DDX55-201ENST00000238146 GRIA2P42262 883 aa16.07■□□□□ 0.16
DDX55-201ENST00000238146 RAP1GAPP47736 663 aa16.07■□□□□ 0.16
DDX55-201ENST00000238146 TFAMQ00059 246 aaKnown RBP16.07■□□□□ 0.16
DDX55-201ENST00000238146 ORC1Q13415 861 aa16.07■□□□□ 0.16
DDX55-201ENST00000238146 CAPSQ13938 189 aa16.07■□□□□ 0.16
DDX55-201ENST00000238146 CCNIQ14094 377 aa16.07■□□□□ 0.16
DDX55-201ENST00000238146 DPY19L2Q6NUT2 758 aa16.07■□□□□ 0.16
DDX55-201ENST00000238146 FAM83AQ86UY5 434 aa16.07■□□□□ 0.16
DDX55-201ENST00000238146 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.07■□□□□ 0.16
DDX55-201ENST00000238146 SLC26A7Q8TE54 656 aa16.07■□□□□ 0.16
DDX55-201ENST00000238146 NSUN6Q8TEA1 469 aaKnown RBP16.07■□□□□ 0.16
DDX55-201ENST00000238146 ATG4CQ96DT6 458 aa16.07■□□□□ 0.16
DDX55-201ENST00000238146 NXF1Q9UBU9 619 aaKnown RBP16.07■□□□□ 0.16
DDX55-201ENST00000238146 SCAF8Q9UPN6 1271 aaKnown RBP16.07■□□□□ 0.16
DDX55-201ENST00000238146 MAFBQ9Y5Q3 323 aaPredicted RBP16.07■□□□□ 0.16
DDX55-201ENST00000238146 COMMD3-BMI1R4GMX3 469 aa16.07■□□□□ 0.16
DDX55-201ENST00000238146 ADCY3O60266 1144 aa16.06■□□□□ 0.16
DDX55-201ENST00000238146 OPHN1O60890 802 aa16.06■□□□□ 0.16
DDX55-201ENST00000238146 TOM1L1O75674 476 aa16.06■□□□□ 0.16
DDX55-201ENST00000238146 RBL1P28749 1068 aa16.06■□□□□ 0.16
DDX55-201ENST00000238146 SP2Q02086 613 aa16.06■□□□□ 0.16
DDX55-201ENST00000238146 LSAMPQ13449 338 aa16.06■□□□□ 0.16
DDX55-201ENST00000238146 TFDP2Q14188 446 aa16.06■□□□□ 0.16
DDX55-201ENST00000238146 ACAP1Q15027 740 aa16.06■□□□□ 0.16
DDX55-201ENST00000238146 PGM2L1Q6PCE3 622 aa16.06■□□□□ 0.16
DDX55-201ENST00000238146 AEBP2Q6ZN18 517 aaPredicted RBP16.06■□□□□ 0.16
DDX55-201ENST00000238146 DENND5BQ6ZUT9 1274 aa16.06■□□□□ 0.16
DDX55-201ENST00000238146 WDR75Q8IWA0 830 aaKnown RBP16.06■□□□□ 0.16
DDX55-201ENST00000238146 PIWIL2Q8TC59 973 aaKnown RBP16.06■□□□□ 0.16
DDX55-201ENST00000238146 RTP4Q96DX8 246 aa16.06■□□□□ 0.16
DDX55-201ENST00000238146 RPAP3Q9H6T3 665 aaPredicted RBP16.06■□□□□ 0.16
DDX55-201ENST00000238146 ETNK2Q9NVF9 386 aa16.06■□□□□ 0.16
DDX55-201ENST00000238146 DNAJC16Q9Y2G8 782 aa16.06■□□□□ 0.16
DDX55-201ENST00000238146 FAM159BA6NKW6 160 aa16.06■□□□□ 0.16
DDX55-201ENST00000238146 MED7O43513 233 aa16.06■□□□□ 0.16
DDX55-201ENST00000238146 EPHB1P54762 984 aa16.06■□□□□ 0.16
DDX55-201ENST00000238146 AQP4P55087 323 aa16.06■□□□□ 0.16
DDX55-201ENST00000238146 GRM2Q14416 872 aa16.06■□□□□ 0.16
DDX55-201ENST00000238146 FASTKD1Q53R41 847 aaKnown RBP16.06■□□□□ 0.16
DDX55-201ENST00000238146 FAM47CQ5HY64 1035 aa16.06■□□□□ 0.16
DDX55-201ENST00000238146 ZPBP2Q6X784 338 aa16.06■□□□□ 0.16
DDX55-201ENST00000238146 PLD5Q8N7P1 536 aa16.06■□□□□ 0.16
DDX55-201ENST00000238146 MCRS1Q96EZ8 462 aa16.06■□□□□ 0.16
DDX55-201ENST00000238146 RNF157Q96PX1 679 aa16.06■□□□□ 0.16
DDX55-201ENST00000238146 KLHL4Q9C0H6 718 aa16.06■□□□□ 0.16
DDX55-201ENST00000238146 ZNF302Q9NR11 478 aa16.06■□□□□ 0.16
DDX55-201ENST00000238146 ASNSD1Q9NWL6 643 aa16.06■□□□□ 0.16
DDX55-201ENST00000238146 SIP14410 1827 aa16.06■□□□□ 0.16
DDX55-201ENST00000238146 SPATA31C2B4DYI2 1134 aa16.05■□□□□ 0.16
DDX55-201ENST00000238146 PDE5AO76074 875 aa16.05■□□□□ 0.16
DDX55-201ENST00000238146 MAP3K6O95382 1288 aa16.05■□□□□ 0.16
DDX55-201ENST00000238146 VCLP18206 1134 aa16.05■□□□□ 0.16
DDX55-201ENST00000238146 PEX2P28328 305 aa16.05■□□□□ 0.16
DDX55-201ENST00000238146 MAGEA6P43360 314 aa16.05■□□□□ 0.16
DDX55-201ENST00000238146 CDH8P55286 799 aa16.05■□□□□ 0.16
DDX55-201ENST00000238146 DLG1Q12959 904 aa16.05■□□□□ 0.16
DDX55-201ENST00000238146 TEDDM1Q5T9Z0 273 aa16.05■□□□□ 0.16
DDX55-201ENST00000238146 MBLAC2Q68D91 279 aa16.05■□□□□ 0.16
DDX55-201ENST00000238146 PPP1R14CQ8TAE6 165 aa16.05■□□□□ 0.16
DDX55-201ENST00000238146 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.05■□□□□ 0.16
DDX55-201ENST00000238146 USP6NLQ92738 828 aa16.05■□□□□ 0.16
DDX55-201ENST00000238146 CDHR1Q96JP9 859 aa16.05■□□□□ 0.16
DDX55-201ENST00000238146 SIGLEC10Q96LC7 697 aa16.05■□□□□ 0.16
DDX55-201ENST00000238146 KLC2Q9H0B6 622 aa16.05■□□□□ 0.16
DDX55-201ENST00000238146 OCEL1Q9H607 264 aa16.05■□□□□ 0.16
DDX55-201ENST00000238146 MAD1L1Q9Y6D9 718 aa16.05■□□□□ 0.16
DDX55-201ENST00000238146 LTBP4Q8N2S1 1624 aa16.05■□□□□ 0.16
DDX55-201ENST00000238146 KLHL2O95198 593 aa16.05■□□□□ 0.16
DDX55-201ENST00000238146 HOXC6P09630 235 aa16.05■□□□□ 0.16
DDX55-201ENST00000238146 L1CAMP32004 1257 aa16.05■□□□□ 0.16
DDX55-201ENST00000238146 COPAP53621 1224 aa16.05■□□□□ 0.16
DDX55-201ENST00000238146 CNTN2Q02246 1040 aa16.05■□□□□ 0.16
DDX55-201ENST00000238146 BTKQ06187 659 aa16.05■□□□□ 0.16
DDX55-201ENST00000238146 C16orf46Q6P387 395 aa16.05■□□□□ 0.16
DDX55-201ENST00000238146 MPP5Q8N3R9 675 aa16.05■□□□□ 0.16
DDX55-201ENST00000238146 GSDMBQ8TAX9 411 aa16.05■□□□□ 0.16
DDX55-201ENST00000238146 GDPD5Q8WTR4 605 aa16.05■□□□□ 0.16
DDX55-201ENST00000238146 LRRN4Q8WUT4 740 aa16.05■□□□□ 0.16
DDX55-201ENST00000238146 LRRC39Q96DD0 335 aa16.05■□□□□ 0.16
DDX55-201ENST00000238146 SIKE1Q9BRV8 207 aa16.05■□□□□ 0.16
DDX55-201ENST00000238146 APOBEC2Q9Y235 224 aaKnown RBP16.05■□□□□ 0.16
DDX55-201ENST00000238146 HEY1Q9Y5J3 304 aa16.05■□□□□ 0.16
DDX55-201ENST00000238146 MSCO60682 206 aa16.04■□□□□ 0.16
DDX55-201ENST00000238146 SIN3BO75182 1162 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms