RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 DNMT3LQ9UJW3 386 aa11.84□□□□□ -0.51
SF3B6-201ENST00000233468 STRIP2Q9ULQ0 834 aa11.84□□□□□ -0.51
SF3B6-201ENST00000233468 OTOGLQ3ZCN5 2332 aa11.84□□□□□ -0.51
SF3B6-201ENST00000233468 CACNA1AO00555 2505 aa11.84□□□□□ -0.51
SF3B6-201ENST00000233468 A0A1W2PQH9 124 aa11.83□□□□□ -0.52
SF3B6-201ENST00000233468 NRG2O14511 850 aaPredicted RBP11.83□□□□□ -0.52
SF3B6-201ENST00000233468 TEX33O43247 280 aa11.83□□□□□ -0.52
SF3B6-201ENST00000233468 LSM8O95777 96 aaKnown RBP11.83□□□□□ -0.52
SF3B6-201ENST00000233468 OLFM2O95897 454 aa11.83□□□□□ -0.52
SF3B6-201ENST00000233468 RARGP13631 454 aa11.83□□□□□ -0.52
SF3B6-201ENST00000233468 LCP1P13796 627 aa11.83□□□□□ -0.52
SF3B6-201ENST00000233468 FERP16591 822 aa11.83□□□□□ -0.52
SF3B6-201ENST00000233468 ID4P47928 161 aa11.83□□□□□ -0.52
SF3B6-201ENST00000233468 KLK7P49862 253 aa11.83□□□□□ -0.52
SF3B6-201ENST00000233468 MLLT6P55198 1093 aaPredicted RBP11.83□□□□□ -0.52
SF3B6-201ENST00000233468 JAM2P57087 298 aa11.83□□□□□ -0.52
SF3B6-201ENST00000233468 YWHAGP61981 247 aaKnown RBP eCLIP11.83□□□□□ -0.52
SF3B6-201ENST00000233468 PRKCQQ04759 706 aa11.83□□□□□ -0.52
SF3B6-201ENST00000233468 PDGFRLQ15198 375 aa11.83□□□□□ -0.52
SF3B6-201ENST00000233468 C10orf120Q5SQS8 335 aa11.83□□□□□ -0.52
SF3B6-201ENST00000233468 PMF1Q6P1K2 205 aa11.83□□□□□ -0.52
SF3B6-201ENST00000233468 SH3RF2Q8TEC5 729 aa11.83□□□□□ -0.52
SF3B6-201ENST00000233468 RNF139Q8WU17 664 aa11.83□□□□□ -0.52
SF3B6-201ENST00000233468 NAP1L5Q96NT1 182 aaPredicted RBP11.83□□□□□ -0.52
SF3B6-201ENST00000233468 CYP2S1Q96SQ9 504 aa11.83□□□□□ -0.52
SF3B6-201ENST00000233468 ZSWIM1Q9BR11 485 aa11.83□□□□□ -0.52
SF3B6-201ENST00000233468 ULBP1Q9BZM6 244 aa11.83□□□□□ -0.52
SF3B6-201ENST00000233468 SYNCQ9H7C4 482 aa11.83□□□□□ -0.52
SF3B6-201ENST00000233468 ARHGEF3Q9NR81 526 aa11.83□□□□□ -0.52
SF3B6-201ENST00000233468 ABCC13Q9NSE7 274 aa11.83□□□□□ -0.52
SF3B6-201ENST00000233468 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.83□□□□□ -0.52
SF3B6-201ENST00000233468 TBC1D14Q9P2M4 693 aa11.83□□□□□ -0.52
SF3B6-201ENST00000233468 LSM7Q9UK45 103 aaKnown RBP11.83□□□□□ -0.52
SF3B6-201ENST00000233468 SIT1Q9Y3P8 196 aa11.83□□□□□ -0.52
SF3B6-201ENST00000233468 MTF2Q9Y483 593 aaPredicted RBP11.83□□□□□ -0.52
SF3B6-201ENST00000233468 MAN2B1O00754 1011 aa11.82□□□□□ -0.52
SF3B6-201ENST00000233468 COCHO43405 550 aa11.82□□□□□ -0.52
SF3B6-201ENST00000233468 GFPT2O94808 682 aa11.82□□□□□ -0.52
SF3B6-201ENST00000233468 PRAMEF12O95522 483 aa11.82□□□□□ -0.52
SF3B6-201ENST00000233468 IFNAR2P48551 515 aa11.82□□□□□ -0.52
SF3B6-201ENST00000233468 RPL34P49207 117 aaKnown RBP11.82□□□□□ -0.52
SF3B6-201ENST00000233468 RGS7P49802 495 aa11.82□□□□□ -0.52
SF3B6-201ENST00000233468 KPNA1P52294 538 aaPredicted RBP11.82□□□□□ -0.52
SF3B6-201ENST00000233468 COG7P83436 770 aa11.82□□□□□ -0.52
SF3B6-201ENST00000233468 NR1H3Q13133 447 aa11.82□□□□□ -0.52
SF3B6-201ENST00000233468 PDCLQ13371 301 aa11.82□□□□□ -0.52
SF3B6-201ENST00000233468 GRM2Q14416 872 aa11.82□□□□□ -0.52
SF3B6-201ENST00000233468 MTF1Q14872 753 aa11.82□□□□□ -0.52
SF3B6-201ENST00000233468 FIGNQ5HY92 759 aa11.82□□□□□ -0.52
SF3B6-201ENST00000233468 C6orf132Q5T0Z8 1188 aa11.82□□□□□ -0.52
SF3B6-201ENST00000233468 PPP1R2P3Q6NXS1 205 aa11.82□□□□□ -0.52
SF3B6-201ENST00000233468 DENND1BQ6P3S1 775 aa11.82□□□□□ -0.52
SF3B6-201ENST00000233468 TRIM72Q6ZMU5 477 aa11.82□□□□□ -0.52
SF3B6-201ENST00000233468 TMEM110Q86TL2 294 aa11.82□□□□□ -0.52
SF3B6-201ENST00000233468 ZDHHC17Q8IUH5 632 aa11.82□□□□□ -0.52
SF3B6-201ENST00000233468 DCLK2Q8N568 766 aa11.82□□□□□ -0.52
SF3B6-201ENST00000233468 PPP1R13BQ96KQ4 1090 aa11.82□□□□□ -0.52
SF3B6-201ENST00000233468 SLC4A5Q9BY07 1137 aa11.82□□□□□ -0.52
SF3B6-201ENST00000233468 PLA2G2FQ9BZM2 168 aa11.82□□□□□ -0.52
SF3B6-201ENST00000233468 SMG9Q9H0W8 520 aaKnown RBP11.82□□□□□ -0.52
SF3B6-201ENST00000233468 C8orf33Q9H7E9 229 aaPredicted RBP11.82□□□□□ -0.52
SF3B6-201ENST00000233468 CCSER2Q9H7U1 834 aa11.82□□□□□ -0.52
SF3B6-201ENST00000233468 AJAP1Q9UKB5 411 aaPredicted RBP11.82□□□□□ -0.52
SF3B6-201ENST00000233468 VPS9D1Q9Y2B5 631 aa11.82□□□□□ -0.52
SF3B6-201ENST00000233468 MRPS17Q9Y2R5 130 aaKnown RBP11.82□□□□□ -0.52
SF3B6-201ENST00000233468 SH3BP1Q9Y3L3 701 aa11.82□□□□□ -0.52
SF3B6-201ENST00000233468 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.82□□□□□ -0.525e-11■□□□□ 10.4
SF3B6-201ENST00000233468 CPQQ9Y646 472 aa11.82□□□□□ -0.52
SF3B6-201ENST00000233468 CEP250Q9BV73 2442 aa11.82□□□□□ -0.52
SF3B6-201ENST00000233468 GPR179Q6PRD1 2367 aa11.82□□□□□ -0.52
SF3B6-201ENST00000233468 E2F8A0AVK6 867 aa11.81□□□□□ -0.52
SF3B6-201ENST00000233468 LEFTY2O00292 366 aa11.81□□□□□ -0.52
SF3B6-201ENST00000233468 TULP2O00295 520 aa11.81□□□□□ -0.52
SF3B6-201ENST00000233468 LMNAP02545 664 aaKnown RBP11.81□□□□□ -0.52
SF3B6-201ENST00000233468 GLI1P08151 1106 aa11.81□□□□□ -0.52
SF3B6-201ENST00000233468 TPM1P09493 284 aa11.81□□□□□ -0.52
SF3B6-201ENST00000233468 SP9P0CG40 484 aa11.81□□□□□ -0.52
SF3B6-201ENST00000233468 PNMA6AP0CW24 399 aaPredicted RBP11.81□□□□□ -0.52
SF3B6-201ENST00000233468 CD72P21854 359 aa11.81□□□□□ -0.52
SF3B6-201ENST00000233468 DAOAP59103 153 aa11.81□□□□□ -0.52
SF3B6-201ENST00000233468 CDR2Q01850 454 aa11.81□□□□□ -0.52
SF3B6-201ENST00000233468 USP4Q13107 963 aa11.81□□□□□ -0.52
SF3B6-201ENST00000233468 ZNF77Q15935 545 aa11.81□□□□□ -0.52
SF3B6-201ENST00000233468 SLC44A4Q53GD3 710 aa11.81□□□□□ -0.52
SF3B6-201ENST00000233468 EFHC1Q5JVL4 640 aa11.81□□□□□ -0.52
SF3B6-201ENST00000233468 BSPRYQ5W0U4 402 aa11.81□□□□□ -0.52
SF3B6-201ENST00000233468 TOGARAM2Q6ZUX3 1019 aa11.81□□□□□ -0.52
SF3B6-201ENST00000233468 BEND5Q7L4P6 421 aa11.81□□□□□ -0.52
SF3B6-201ENST00000233468 GPIHBP1Q8IV16 184 aa11.81□□□□□ -0.52
SF3B6-201ENST00000233468 C1orf210Q8IVY1 113 aa11.81□□□□□ -0.52
SF3B6-201ENST00000233468 KIAA2013Q8IYS2 634 aa11.81□□□□□ -0.52
SF3B6-201ENST00000233468 MAML2Q8IZL2 1156 aaPredicted RBP11.81□□□□□ -0.52
SF3B6-201ENST00000233468 CPA6Q8N4T0 437 aa11.81□□□□□ -0.52
SF3B6-201ENST00000233468 RNF214Q8ND24 703 aa11.81□□□□□ -0.52
SF3B6-201ENST00000233468 TTC16Q8NEE8 873 aa11.81□□□□□ -0.52
SF3B6-201ENST00000233468 PJA1Q8NG27 643 aa11.81□□□□□ -0.52
SF3B6-201ENST00000233468 EPS8L1Q8TE68 723 aa11.81□□□□□ -0.52
SF3B6-201ENST00000233468 OSCP1Q8WVF1 389 aa11.81□□□□□ -0.52
SF3B6-201ENST00000233468 ATP2A3Q93084 1043 aa11.81□□□□□ -0.52
SF3B6-201ENST00000233468 RMDN1Q96DB5 314 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms