RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 MFSD1Q9H3U5 465 aa14.4□□□□□ -0.1
VEGFA-201ENST00000230480 C8orf33Q9H7E9 229 aaPredicted RBP14.4□□□□□ -0.1
VEGFA-201ENST00000230480 CNGB3Q9NQW8 809 aa14.4□□□□□ -0.1
VEGFA-201ENST00000230480 FAM207AQ9NSI2 230 aaPredicted RBP14.4□□□□□ -0.1
VEGFA-201ENST00000230480 WDR87Q6ZQQ6 2873 aa14.4□□□□□ -0.1
VEGFA-201ENST00000230480 E5RJQ4 531 aa14.39□□□□□ -0.11
VEGFA-201ENST00000230480 TRIM24O15164 1050 aa14.39□□□□□ -0.11
VEGFA-201ENST00000230480 TDGF1P13385 188 aa14.39□□□□□ -0.11
VEGFA-201ENST00000230480 PSEN1P49768 467 aa14.39□□□□□ -0.11
VEGFA-201ENST00000230480 POLR2FP61218 127 aaKnown RBP14.39□□□□□ -0.11
VEGFA-201ENST00000230480 PDCLQ13371 301 aa14.39□□□□□ -0.11
VEGFA-201ENST00000230480 UBXN2BQ14CS0 331 aa14.39□□□□□ -0.11
VEGFA-201ENST00000230480 PON2Q15165 354 aa14.39□□□□□ -0.11
VEGFA-201ENST00000230480 PTPN20Q4JDL3 420 aa14.39□□□□□ -0.11
VEGFA-201ENST00000230480 SYPL2Q5VXT5 272 aa14.39□□□□□ -0.11
VEGFA-201ENST00000230480 MSANTD2Q6P1R3 559 aa14.39□□□□□ -0.11
VEGFA-201ENST00000230480 Q6ZS52 159 aa14.39□□□□□ -0.11
VEGFA-201ENST00000230480 TMEM25Q86YD3 366 aa14.39□□□□□ -0.11
VEGFA-201ENST00000230480 PASD1Q8IV76 773 aa14.39□□□□□ -0.11
VEGFA-201ENST00000230480 SHDQ96IW2 340 aa14.39□□□□□ -0.11
VEGFA-201ENST00000230480 PCDHB18PQ96TA0 734 aa14.39□□□□□ -0.11
VEGFA-201ENST00000230480 PRRX2Q99811 253 aa14.39□□□□□ -0.11
VEGFA-201ENST00000230480 SYT11Q9BT88 431 aa14.39□□□□□ -0.11
VEGFA-201ENST00000230480 TTYH3Q9C0H2 523 aa14.39□□□□□ -0.11
VEGFA-201ENST00000230480 LMAN1LQ9HAT1 526 aa14.39□□□□□ -0.11
VEGFA-201ENST00000230480 LRRC4Q9HBW1 653 aa14.39□□□□□ -0.11
VEGFA-201ENST00000230480 NLRC4Q9NPP4 1024 aa14.39□□□□□ -0.11
VEGFA-201ENST00000230480 POLR3BQ9NW08 1133 aaPredicted RBP14.39□□□□□ -0.11
VEGFA-201ENST00000230480 THG1LQ9NWX6 298 aaKnown RBP14.39□□□□□ -0.11
VEGFA-201ENST00000230480 SFMBT1Q9UHJ3 866 aa14.39□□□□□ -0.11
VEGFA-201ENST00000230480 NDRG2Q9UN36 371 aaKnown RBP14.39□□□□□ -0.11
VEGFA-201ENST00000230480 ZFHX2Q9C0A1 2572 aaPredicted RBP14.39□□□□□ -0.11
VEGFA-201ENST00000230480 VPS13AQ96RL7 3174 aa14.38□□□□□ -0.11
VEGFA-201ENST00000230480 FAM170AA1A519 330 aa14.38□□□□□ -0.11
VEGFA-201ENST00000230480 MAN2B1O00754 1011 aa14.38□□□□□ -0.11
VEGFA-201ENST00000230480 IGLV3-27P01718 113 aa14.38□□□□□ -0.11
VEGFA-201ENST00000230480 ERBB2P04626 1255 aa14.38□□□□□ -0.11
VEGFA-201ENST00000230480 IRF1P10914 325 aa14.38□□□□□ -0.11
VEGFA-201ENST00000230480 RPS9P46781 194 aaKnown RBP14.38□□□□□ -0.11
VEGFA-201ENST00000230480 PDE6CP51160 858 aa14.38□□□□□ -0.11
VEGFA-201ENST00000230480 UBXN1Q04323 297 aa14.38□□□□□ -0.11
VEGFA-201ENST00000230480 EFEMP1Q12805 493 aa14.38□□□□□ -0.11
VEGFA-201ENST00000230480 RAPGEF1Q13905 1077 aa14.38□□□□□ -0.11
VEGFA-201ENST00000230480 TRIP4Q15650 581 aaPredicted RBP14.38□□□□□ -0.11
VEGFA-201ENST00000230480 C10orf120Q5SQS8 335 aa14.38□□□□□ -0.11
VEGFA-201ENST00000230480 LY6G5CQ5SRR4 150 aa14.38□□□□□ -0.11
VEGFA-201ENST00000230480 ARTNQ5T4W7 220 aa14.38□□□□□ -0.11
VEGFA-201ENST00000230480 OTUD1Q5VV17 481 aaPredicted RBP14.38□□□□□ -0.11
VEGFA-201ENST00000230480 TRNP1Q6NT89 227 aa14.38□□□□□ -0.11
VEGFA-201ENST00000230480 ETFBKMTQ8IXQ9 262 aa14.38□□□□□ -0.11
VEGFA-201ENST00000230480 C1orf131Q8NDD1 294 aaKnown RBP14.38□□□□□ -0.11
VEGFA-201ENST00000230480 TTC16Q8NEE8 873 aa14.38□□□□□ -0.11
VEGFA-201ENST00000230480 CSGALNACT1Q8TDX6 532 aa14.38□□□□□ -0.11
VEGFA-201ENST00000230480 IRGQQ8WZA9 623 aa14.38□□□□□ -0.11
VEGFA-201ENST00000230480 MYEOVQ96EZ4 313 aa14.38□□□□□ -0.11
VEGFA-201ENST00000230480 NELL2Q99435 816 aa14.38□□□□□ -0.11
VEGFA-201ENST00000230480 MIS12Q9H081 205 aa14.38□□□□□ -0.11
VEGFA-201ENST00000230480 CHRDQ9H2X0 955 aa14.38□□□□□ -0.11
VEGFA-201ENST00000230480 CALCOCO1Q9P1Z2 691 aa14.38□□□□□ -0.11
VEGFA-201ENST00000230480 DNMT3LQ9UJW3 386 aa14.38□□□□□ -0.11
VEGFA-201ENST00000230480 NAALADL1Q9UQQ1 740 aa14.38□□□□□ -0.11
VEGFA-201ENST00000230480 MYO15AQ9UKN7 3530 aa14.38□□□□□ -0.11
VEGFA-201ENST00000230480 EML5Q05BV3 1969 aa14.38□□□□□ -0.11
VEGFA-201ENST00000230480 OTOGLQ3ZCN5 2332 aa14.37□□□□□ -0.11
VEGFA-201ENST00000230480 A0A0A0MRY4 1105 aa14.37□□□□□ -0.11
VEGFA-201ENST00000230480 PES1O00541 588 aaKnown RBP14.37□□□□□ -0.11
VEGFA-201ENST00000230480 MSI1O43347 362 aaKnown RBP14.37□□□□□ -0.11
VEGFA-201ENST00000230480 GFPT2O94808 682 aa14.37□□□□□ -0.11
VEGFA-201ENST00000230480 EGFP01133 1207 aa14.37□□□□□ -0.11
VEGFA-201ENST00000230480 IGLV3-25P01717 112 aa14.37□□□□□ -0.11
VEGFA-201ENST00000230480 CYP1A1P04798 512 aaPredicted RBP14.37□□□□□ -0.11
VEGFA-201ENST00000230480 MMEP08473 750 aa14.37□□□□□ -0.11
VEGFA-201ENST00000230480 TRIM21P19474 475 aaKnown RBP14.37□□□□□ -0.11
VEGFA-201ENST00000230480 SOX5P35711 763 aa14.37□□□□□ -0.11
VEGFA-201ENST00000230480 IFNAR2P48551 515 aa14.37□□□□□ -0.11
VEGFA-201ENST00000230480 KPNA1P52294 538 aaPredicted RBP14.37□□□□□ -0.11
VEGFA-201ENST00000230480 FMO1Q01740 532 aa14.37□□□□□ -0.11
VEGFA-201ENST00000230480 PTK2Q05397 1052 aa14.37□□□□□ -0.11
VEGFA-201ENST00000230480 MTAPQ13126 283 aa14.37□□□□□ -0.11
VEGFA-201ENST00000230480 MAMSTRQ6ZN01 415 aa14.37□□□□□ -0.11
VEGFA-201ENST00000230480 IRF2BP2Q7Z5L9 587 aa14.37□□□□□ -0.11
VEGFA-201ENST00000230480 MIB1Q86YT6 1006 aa14.37□□□□□ -0.11
VEGFA-201ENST00000230480 FAM217AQ8IXS0 508 aa14.37□□□□□ -0.11
VEGFA-201ENST00000230480 NELL1Q92832 810 aa14.37□□□□□ -0.11
VEGFA-201ENST00000230480 DNAI2Q9GZS0 605 aa14.37□□□□□ -0.11
VEGFA-201ENST00000230480 MARCH2Q9P0N8 246 aa14.37□□□□□ -0.11
VEGFA-201ENST00000230480 AGO1Q9UL18 857 aaKnown RBP14.37□□□□□ -0.11
VEGFA-201ENST00000230480 CLEC4EQ9ULY5 219 aa14.37□□□□□ -0.11
VEGFA-201ENST00000230480 EP300Q09472 2414 aaPredicted RBP14.37□□□□□ -0.11
VEGFA-201ENST00000230480 SDK1Q7Z5N4 2213 aa14.37□□□□□ -0.11
VEGFA-201ENST00000230480 SMTNL1A8MU46 457 aa14.36□□□□□ -0.11
VEGFA-201ENST00000230480 H0Y858 1186 aa14.36□□□□□ -0.11
VEGFA-201ENST00000230480 K7EQS6 105 aa14.36□□□□□ -0.11
VEGFA-201ENST00000230480 STK25O00506 426 aa14.36□□□□□ -0.11
VEGFA-201ENST00000230480 LTFP02788 710 aa14.36□□□□□ -0.11
VEGFA-201ENST00000230480 CISD3P0C7P0 127 aa14.36□□□□□ -0.11
VEGFA-201ENST00000230480 CDK11BP21127 795 aaKnown RBP14.36□□□□□ -0.11
VEGFA-201ENST00000230480 RFX1P22670 979 aa14.36□□□□□ -0.11
VEGFA-201ENST00000230480 NUBP1P53384 320 aa14.36□□□□□ -0.11
VEGFA-201ENST00000230480 FANCCQ00597 558 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms