RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 MAVSQ7Z434 540 aa12.86□□□□□ -0.35
NUP88-201ENST00000225696 PLD5Q8N7P1 536 aa12.86□□□□□ -0.35
NUP88-201ENST00000225696 HIPK4Q8NE63 616 aa12.86□□□□□ -0.35
NUP88-201ENST00000225696 REPS2Q8NFH8 660 aa12.86□□□□□ -0.35
NUP88-201ENST00000225696 WWP1Q9H0M0 922 aa12.86□□□□□ -0.35
NUP88-201ENST00000225696 STK32BQ9NY57 414 aa12.86□□□□□ -0.35
NUP88-201ENST00000225696 ZNF214Q9UL59 606 aaPredicted RBP12.86□□□□□ -0.35
NUP88-201ENST00000225696 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.86□□□□□ -0.35
NUP88-201ENST00000225696 CIB2O75838 187 aa12.86□□□□□ -0.35
NUP88-201ENST00000225696 ENDOD1O94919 500 aa12.86□□□□□ -0.35
NUP88-201ENST00000225696 CCNFP41002 786 aa12.86□□□□□ -0.35
NUP88-201ENST00000225696 AP2B1P63010 937 aa12.86□□□□□ -0.35
NUP88-201ENST00000225696 MSLNQ13421 630 aaPredicted RBP12.86□□□□□ -0.35
NUP88-201ENST00000225696 TMEM132BQ14DG7 1078 aa12.86□□□□□ -0.35
NUP88-201ENST00000225696 CA9Q16790 459 aa12.86□□□□□ -0.35
NUP88-201ENST00000225696 FAM102AQ5T9C2 384 aaPredicted RBP12.86□□□□□ -0.35
NUP88-201ENST00000225696 DPY19L2Q6NUT2 758 aa12.86□□□□□ -0.35
NUP88-201ENST00000225696 ISLR2Q6UXK2 745 aa12.86□□□□□ -0.35
NUP88-201ENST00000225696 CRLF3Q8IUI8 442 aa12.86□□□□□ -0.35
NUP88-201ENST00000225696 EGFL6Q8IUX8 553 aa12.86□□□□□ -0.35
NUP88-201ENST00000225696 PQLC3Q8N755 202 aa12.86□□□□□ -0.35
NUP88-201ENST00000225696 SLC4A11Q8NBS3 891 aa12.86□□□□□ -0.35
NUP88-201ENST00000225696 NR1H4Q96RI1 486 aaPredicted RBP12.86□□□□□ -0.35
NUP88-201ENST00000225696 ELOVL4Q9GZR5 314 aa12.86□□□□□ -0.35
NUP88-201ENST00000225696 LHX5Q9H2C1 402 aa12.86□□□□□ -0.35
NUP88-201ENST00000225696 RSAD1Q9HA92 442 aa12.86□□□□□ -0.35
NUP88-201ENST00000225696 PIH1D1Q9NWS0 290 aaKnown RBP12.86□□□□□ -0.35
NUP88-201ENST00000225696 PDP2Q9P2J9 529 aa12.86□□□□□ -0.35
NUP88-201ENST00000225696 SIX4Q9UIU6 781 aa12.86□□□□□ -0.35
NUP88-201ENST00000225696 CPSF3Q9UKF6 684 aaKnown RBP12.86□□□□□ -0.35
NUP88-201ENST00000225696 MAD1L1Q9Y6D9 718 aa12.86□□□□□ -0.35
NUP88-201ENST00000225696 COL11A1P12107 1806 aaPredicted RBP12.85□□□□□ -0.35
NUP88-201ENST00000225696 SIP14410 1827 aa12.85□□□□□ -0.35
NUP88-201ENST00000225696 BPTFQ12830 3046 aa12.85□□□□□ -0.35
NUP88-201ENST00000225696 ARHGAP42A6NI28 874 aa12.85□□□□□ -0.35
NUP88-201ENST00000225696 B4GALT5O43286 388 aa12.85□□□□□ -0.35
NUP88-201ENST00000225696 TOM1L1O75674 476 aa12.85□□□□□ -0.35
NUP88-201ENST00000225696 METTL18O95568 372 aa12.85□□□□□ -0.35
NUP88-201ENST00000225696 APOEP02649 317 aa12.85□□□□□ -0.35
NUP88-201ENST00000225696 SERPINA6P08185 405 aa12.85□□□□□ -0.35
NUP88-201ENST00000225696 OSBPP22059 807 aa12.85□□□□□ -0.35
NUP88-201ENST00000225696 KCNA4P22459 653 aa12.85□□□□□ -0.35
NUP88-201ENST00000225696 POLR2BP30876 1174 aaKnown RBP12.85□□□□□ -0.35
NUP88-201ENST00000225696 EPHB1P54762 984 aa12.85□□□□□ -0.35
NUP88-201ENST00000225696 RPL10AP62906 217 aaKnown RBP12.85□□□□□ -0.35
NUP88-201ENST00000225696 CRADDP78560 199 aa12.85□□□□□ -0.35
NUP88-201ENST00000225696 CNTN2Q02246 1040 aa12.85□□□□□ -0.35
NUP88-201ENST00000225696 GSTA3Q16772 222 aa12.85□□□□□ -0.35
NUP88-201ENST00000225696 VWA5B1Q5TIE3 1220 aa12.85□□□□□ -0.35
NUP88-201ENST00000225696 FKBP1CQ5VVH2 108 aa12.85□□□□□ -0.35
NUP88-201ENST00000225696 ATG16L1Q676U5 607 aa12.85□□□□□ -0.35
NUP88-201ENST00000225696 XRRA1Q6P2D8 792 aa12.85□□□□□ -0.35
NUP88-201ENST00000225696 RSPH3Q86UC2 560 aa12.85□□□□□ -0.35
NUP88-201ENST00000225696 STKLD1Q8NE28 680 aa12.85□□□□□ -0.35
NUP88-201ENST00000225696 CCDC124Q96CT7 223 aaKnown RBP12.85□□□□□ -0.35
NUP88-201ENST00000225696 ACO2Q99798 780 aaKnown RBP12.85□□□□□ -0.35
NUP88-201ENST00000225696 SPATA16Q9BXB7 569 aa12.85□□□□□ -0.35
NUP88-201ENST00000225696 ETNK2Q9NVF9 386 aa12.85□□□□□ -0.35
NUP88-201ENST00000225696 EMCNQ9ULC0 261 aa12.85□□□□□ -0.35
NUP88-201ENST00000225696 E2F8A0AVK6 867 aa12.84□□□□□ -0.35
NUP88-201ENST00000225696 ZMPSTE24O75844 475 aa12.84□□□□□ -0.35
NUP88-201ENST00000225696 STK10O94804 968 aaKnown RBP12.84□□□□□ -0.35
NUP88-201ENST00000225696 MICAL2O94851 1124 aa12.84□□□□□ -0.35
NUP88-201ENST00000225696 DLG1Q12959 904 aa12.84□□□□□ -0.35
NUP88-201ENST00000225696 STX3Q13277 289 aa12.84□□□□□ -0.35
NUP88-201ENST00000225696 CCNIQ14094 377 aa12.84□□□□□ -0.35
NUP88-201ENST00000225696 ZRSR2Q15696 482 aaKnown RBP12.84□□□□□ -0.35
NUP88-201ENST00000225696 CFAP157Q5JU67 520 aa12.84□□□□□ -0.35
NUP88-201ENST00000225696 RABGAP1LQ5R372 815 aa12.84□□□□□ -0.35
NUP88-201ENST00000225696 TMCO4Q5TGY1 634 aa12.84□□□□□ -0.35
NUP88-201ENST00000225696 RASIP1Q5U651 963 aa12.84□□□□□ -0.35
NUP88-201ENST00000225696 LRRC71Q8N4P6 559 aa12.84□□□□□ -0.35
NUP88-201ENST00000225696 RXFP2Q8WXD0 754 aa12.84□□□□□ -0.35
NUP88-201ENST00000225696 SIGLEC10Q96LC7 697 aa12.84□□□□□ -0.35
NUP88-201ENST00000225696 RNF157Q96PX1 679 aa12.84□□□□□ -0.35
NUP88-201ENST00000225696 GORASP1Q9BQQ3 440 aa12.84□□□□□ -0.35
NUP88-201ENST00000225696 TMEM134Q9H6X4 195 aa12.84□□□□□ -0.35
NUP88-201ENST00000225696 XAB2Q9HCS7 855 aaKnown RBP12.84□□□□□ -0.35
NUP88-201ENST00000225696 S100A14Q9HCY8 104 aa12.84□□□□□ -0.35
NUP88-201ENST00000225696 ZNF180Q9UJW8 692 aa12.84□□□□□ -0.35
NUP88-201ENST00000225696 DNAJC16Q9Y2G8 782 aa12.84□□□□□ -0.35
NUP88-201ENST00000225696 M0QYV0 167 aa12.84□□□□□ -0.35
NUP88-201ENST00000225696 ADCY6O43306 1168 aa12.84□□□□□ -0.35
NUP88-201ENST00000225696 SPAG6O75602 509 aa12.84□□□□□ -0.35
NUP88-201ENST00000225696 F7P08709 466 aaPredicted RBP12.84□□□□□ -0.35
NUP88-201ENST00000225696 CYP3A5P20815 502 aa12.84□□□□□ -0.35
NUP88-201ENST00000225696 PEX2P28328 305 aa12.84□□□□□ -0.35
NUP88-201ENST00000225696 GPD2P43304 727 aa12.84□□□□□ -0.35
NUP88-201ENST00000225696 AQP4P55087 323 aa12.84□□□□□ -0.35
NUP88-201ENST00000225696 TARBP2Q15633 366 aaKnown RBP12.84□□□□□ -0.35
NUP88-201ENST00000225696 FASTKD1Q53R41 847 aaKnown RBP12.84□□□□□ -0.35
NUP88-201ENST00000225696 TEDDM1Q5T9Z0 273 aa12.84□□□□□ -0.35
NUP88-201ENST00000225696 SCYL2Q6P3W7 929 aa12.84□□□□□ -0.35
NUP88-201ENST00000225696 PCDH19Q8TAB3 1148 aa12.84□□□□□ -0.35
NUP88-201ENST00000225696 FAM172AQ8WUF8 416 aa12.84□□□□□ -0.35
NUP88-201ENST00000225696 MCRS1Q96EZ8 462 aa12.84□□□□□ -0.35
NUP88-201ENST00000225696 PGLYRP2Q96PD5 576 aa12.84□□□□□ -0.35
NUP88-201ENST00000225696 EPAS1Q99814 870 aa12.84□□□□□ -0.35
NUP88-201ENST00000225696 ADPGKQ9BRR6 497 aa12.84□□□□□ -0.35
NUP88-201ENST00000225696 CYP4F11Q9HBI6 524 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms