RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 GABRB2P47870 512 aa15.07■□□□□ 0
SUPT4H1-201ENST00000225504 SOX9P48436 509 aa15.07■□□□□ 0
SUPT4H1-201ENST00000225504 PITX1P78337 314 aaPredicted RBP15.07■□□□□ 0
SUPT4H1-201ENST00000225504 CLEC16AQ2KHT3 1053 aa15.07■□□□□ 0
SUPT4H1-201ENST00000225504 SPECC1LQ69YQ0 1117 aa15.07■□□□□ 0
SUPT4H1-201ENST00000225504 CC2D1AQ6P1N0 951 aaPredicted RBP15.07■□□□□ 0
SUPT4H1-201ENST00000225504 OLFML1Q6UWY5 402 aa15.07■□□□□ 0
SUPT4H1-201ENST00000225504 XYLT1Q86Y38 959 aa15.07■□□□□ 0
SUPT4H1-201ENST00000225504 DNAAF5Q86Y56 855 aa15.07■□□□□ 0
SUPT4H1-201ENST00000225504 RNF139Q8WU17 664 aa15.07■□□□□ 0
SUPT4H1-201ENST00000225504 FAM149B1Q96BN6 582 aa15.07■□□□□ 0
SUPT4H1-201ENST00000225504 C18orf8Q96DM3 657 aa15.07■□□□□ 0
SUPT4H1-201ENST00000225504 SYNCQ9H7C4 482 aa15.07■□□□□ 0
SUPT4H1-201ENST00000225504 SEPT11Q9NVA2 429 aaKnown RBP15.07■□□□□ 0
SUPT4H1-201ENST00000225504 DUS2Q9NX74 493 aaKnown RBP15.07■□□□□ 0
SUPT4H1-201ENST00000225504 TAS2R14Q9NYV8 317 aa15.07■□□□□ 0
SUPT4H1-201ENST00000225504 LUC7L2Q9Y383 392 aaKnown RBP15.07■□□□□ 0
SUPT4H1-201ENST00000225504 KIF26AQ9ULI4 1882 aaPredicted RBP15.06■□□□□ 0
SUPT4H1-201ENST00000225504 SLC12A8A0AV02 714 aa15.06■□□□□ 0
SUPT4H1-201ENST00000225504 E2F8A0AVK6 867 aa15.06■□□□□ 0
SUPT4H1-201ENST00000225504 MSI1O43347 362 aaKnown RBP15.06■□□□□ 0
SUPT4H1-201ENST00000225504 STC2O76061 302 aa15.06■□□□□ 0
SUPT4H1-201ENST00000225504 TNFAIP3P21580 790 aa15.06■□□□□ 0
SUPT4H1-201ENST00000225504 PRKCIP41743 596 aa15.06■□□□□ 0
SUPT4H1-201ENST00000225504 YWHAZP63104 245 aaKnown RBP15.06■□□□□ 0
SUPT4H1-201ENST00000225504 SLC6A3Q01959 620 aa15.06■□□□□ 0
SUPT4H1-201ENST00000225504 KLHL30Q0D2K2 578 aa15.06■□□□□ 0
SUPT4H1-201ENST00000225504 PTP4A2Q12974 167 aa15.06■□□□□ 0
SUPT4H1-201ENST00000225504 EML3Q32P44 896 aa15.06■□□□□ 0
SUPT4H1-201ENST00000225504 HGSNATQ68CP4 663 aa15.06■□□□□ 0
SUPT4H1-201ENST00000225504 MMS22LQ6ZRQ5 1243 aa15.06■□□□□ 0
SUPT4H1-201ENST00000225504 FMNL3Q8IVF7 1028 aa15.06■□□□□ 0
SUPT4H1-201ENST00000225504 BBS7Q8IWZ6 715 aa15.06■□□□□ 0
SUPT4H1-201ENST00000225504 ADGRG2Q8IZP9 1017 aa15.06■□□□□ 0
SUPT4H1-201ENST00000225504 OSCP1Q8WVF1 389 aa15.06■□□□□ 0
SUPT4H1-201ENST00000225504 TRPV5Q9NQA5 729 aa15.06■□□□□ 0
SUPT4H1-201ENST00000225504 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.06■□□□□ 06e-6■□□□□ 9.8
SUPT4H1-201ENST00000225504 COL4A2P08572 1712 aa15.05■□□□□ 0
SUPT4H1-201ENST00000225504 PLEKP08567 350 aaPredicted RBP15.05■□□□□ -0
SUPT4H1-201ENST00000225504 CCDC172P0C7W6 258 aa15.05■□□□□ -0
SUPT4H1-201ENST00000225504 NCAM1P13591 858 aa15.05■□□□□ -0
SUPT4H1-201ENST00000225504 MMP8P22894 467 aa15.05■□□□□ -0
SUPT4H1-201ENST00000225504 ZNF75DP51815 510 aa15.05■□□□□ -0
SUPT4H1-201ENST00000225504 PFKPQ01813 784 aa15.05■□□□□ -0
SUPT4H1-201ENST00000225504 RUNX3Q13761 415 aa15.05■□□□□ -0
SUPT4H1-201ENST00000225504 MSANTD2Q6P1R3 559 aa15.05■□□□□ -0
SUPT4H1-201ENST00000225504 TRIM72Q6ZMU5 477 aa15.05■□□□□ -0
SUPT4H1-201ENST00000225504 HTR3DQ70Z44 454 aa15.05■□□□□ -0
SUPT4H1-201ENST00000225504 TADA2BQ86TJ2 420 aa15.05■□□□□ -0
SUPT4H1-201ENST00000225504 DEFB106AQ8N104 65 aa15.05■□□□□ -0
SUPT4H1-201ENST00000225504 ADAM32Q8TC27 787 aa15.05■□□□□ -0
SUPT4H1-201ENST00000225504 DQX1Q8TE96 717 aaKnown RBP15.05■□□□□ -0
SUPT4H1-201ENST00000225504 IPO4Q8TEX9 1081 aaKnown RBP15.05■□□□□ -0
SUPT4H1-201ENST00000225504 DNASE1L2Q92874 299 aa15.05■□□□□ -0
SUPT4H1-201ENST00000225504 CHFRQ96EP1 664 aa15.05■□□□□ -0
SUPT4H1-201ENST00000225504 CDK5RAP1Q96SZ6 601 aaKnown RBP15.05■□□□□ -0
SUPT4H1-201ENST00000225504 ARHGEF3Q9NR81 526 aa15.05■□□□□ -0
SUPT4H1-201ENST00000225504 SH3BP1Q9Y3L3 701 aa15.05■□□□□ -0
SUPT4H1-201ENST00000225504 GOLGA8SH3BPF8 625 aa15.04■□□□□ -0
SUPT4H1-201ENST00000225504 DDX3XO00571 662 aaKnown RBP eCLIP15.04■□□□□ -07e-12■■■■□ 23.3
SUPT4H1-201ENST00000225504 SART1O43290 800 aaKnown RBP15.04■□□□□ -0
SUPT4H1-201ENST00000225504 GJB6O95452 261 aa15.04■□□□□ -0
SUPT4H1-201ENST00000225504 IFNAR2P48551 515 aa15.04■□□□□ -0
SUPT4H1-201ENST00000225504 ADKP55263 362 aaKnown RBP15.04■□□□□ -0
SUPT4H1-201ENST00000225504 RNASE9P60153 205 aaKnown RBP15.04■□□□□ -0
SUPT4H1-201ENST00000225504 COG7P83436 770 aa15.04■□□□□ -0
SUPT4H1-201ENST00000225504 TBX2Q13207 712 aaPredicted RBP15.04■□□□□ -0
SUPT4H1-201ENST00000225504 PDGFRLQ15198 375 aa15.04■□□□□ -0
SUPT4H1-201ENST00000225504 MLF2Q15773 248 aaPredicted RBP15.04■□□□□ -0
SUPT4H1-201ENST00000225504 ITPRIPL2Q3MIP1 535 aa15.04■□□□□ -0
SUPT4H1-201ENST00000225504 EFHC1Q5JVL4 640 aa15.04■□□□□ -0
SUPT4H1-201ENST00000225504 NAIF1Q69YI7 327 aaPredicted RBP15.04■□□□□ -0
SUPT4H1-201ENST00000225504 ACAD10Q6JQN1 1059 aa15.04■□□□□ -0
SUPT4H1-201ENST00000225504 TMC6Q7Z403 805 aa15.04■□□□□ -0
SUPT4H1-201ENST00000225504 DDX42Q86XP3 938 aaKnown RBP eCLIP15.04■□□□□ -0
SUPT4H1-201ENST00000225504 ZNF397Q8NF99 534 aaPredicted RBP15.04■□□□□ -0
SUPT4H1-201ENST00000225504 CSGALNACT1Q8TDX6 532 aa15.04■□□□□ -0
SUPT4H1-201ENST00000225504 SYN2Q92777 582 aaPredicted RBP15.04■□□□□ -0
SUPT4H1-201ENST00000225504 GOLGA1Q92805 767 aa15.04■□□□□ -0
SUPT4H1-201ENST00000225504 SLC2A13Q96QE2 648 aa15.04■□□□□ -0
SUPT4H1-201ENST00000225504 C11orf70Q9BRQ4 267 aa15.04■□□□□ -0
SUPT4H1-201ENST00000225504 POPDC2Q9HBU9 364 aa15.04■□□□□ -0
SUPT4H1-201ENST00000225504 OLA1Q9NTK5 396 aaKnown RBP15.04■□□□□ -0
SUPT4H1-201ENST00000225504 STRIP2Q9ULQ0 834 aa15.04■□□□□ -0
SUPT4H1-201ENST00000225504 MTF2Q9Y483 593 aaPredicted RBP15.04■□□□□ -0
SUPT4H1-201ENST00000225504 TMCO5BA8MYB1 307 aa15.03■□□□□ -0
SUPT4H1-201ENST00000225504 TFE3P19532 575 aaPredicted RBP15.03■□□□□ -0
SUPT4H1-201ENST00000225504 KPNA1P52294 538 aaPredicted RBP15.03■□□□□ -0
SUPT4H1-201ENST00000225504 SNX16P57768 344 aa15.03■□□□□ -0
SUPT4H1-201ENST00000225504 CENPCQ03188 943 aa15.03■□□□□ -0
SUPT4H1-201ENST00000225504 TRIP4Q15650 581 aaPredicted RBP15.03■□□□□ -0
SUPT4H1-201ENST00000225504 DCAF6Q58WW2 860 aa15.03■□□□□ -0
SUPT4H1-201ENST00000225504 TRNP1Q6NT89 227 aa15.03■□□□□ -0
SUPT4H1-201ENST00000225504 RHBDF2Q6PJF5 856 aa15.03■□□□□ -0
SUPT4H1-201ENST00000225504 WDR59Q6PJI9 974 aa15.03■□□□□ -0
SUPT4H1-201ENST00000225504 TXNDC11Q6PKC3 985 aa15.03■□□□□ -0
SUPT4H1-201ENST00000225504 Q6ZNB5 142 aa15.03■□□□□ -0
SUPT4H1-201ENST00000225504 TPRG1Q6ZUI0 275 aa15.03■□□□□ -0
SUPT4H1-201ENST00000225504 BEND5Q7L4P6 421 aa15.03■□□□□ -0
SUPT4H1-201ENST00000225504 SLC26A9Q7LBE3 791 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms