RNA–Protein interactions for RNA: ENST00000223500.8

CHMP5-201, Transcript of charged multivesicular body protein 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP5, Length 1,477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5-201ENST00000223500 M0QYT0 321 aa17.28■□□□□ 0.36
CHMP5-201ENST00000223500 NCK2O43639 380 aa17.28■□□□□ 0.36
CHMP5-201ENST00000223500 F11P03951 625 aa17.28■□□□□ 0.36
CHMP5-201ENST00000223500 POU3F3P20264 500 aaPredicted RBP17.28■□□□□ 0.36
CHMP5-201ENST00000223500 GABRR2P28476 465 aa17.28■□□□□ 0.36
CHMP5-201ENST00000223500 PCK1P35558 622 aa17.28■□□□□ 0.36
CHMP5-201ENST00000223500 DEUP1Q05D60 604 aa17.28■□□□□ 0.36
CHMP5-201ENST00000223500 HYAL1Q12794 435 aa17.28■□□□□ 0.36
CHMP5-201ENST00000223500 KCNC3Q14003 757 aa17.28■□□□□ 0.36
CHMP5-201ENST00000223500 RPS6KA1Q15418 735 aa17.28■□□□□ 0.36
CHMP5-201ENST00000223500 MEI1Q5TIA1 1274 aa17.28■□□□□ 0.36
CHMP5-201ENST00000223500 TMEM184AQ6ZMB5 413 aa17.28■□□□□ 0.36
CHMP5-201ENST00000223500 SND1Q7KZF4 910 aaKnown RBP eCLIP17.28■□□□□ 0.36
CHMP5-201ENST00000223500 UBL4BQ8N7F7 174 aa17.28■□□□□ 0.36
CHMP5-201ENST00000223500 CMASQ8NFW8 434 aaPredicted RBP17.28■□□□□ 0.36
CHMP5-201ENST00000223500 MRPS31Q92665 395 aaKnown RBP17.28■□□□□ 0.36
CHMP5-201ENST00000223500 CENPIQ92674 756 aaPredicted RBP17.28■□□□□ 0.36
CHMP5-201ENST00000223500 WDR24Q96S15 920 aa17.28■□□□□ 0.36
CHMP5-201ENST00000223500 TBCBQ99426 244 aa17.28■□□□□ 0.36
CHMP5-201ENST00000223500 GAS2L1Q99501 681 aaPredicted RBP17.28■□□□□ 0.36
CHMP5-201ENST00000223500 ZNF334Q9HCZ1 680 aaPredicted RBP17.28■□□□□ 0.36
CHMP5-201ENST00000223500 OSER1Q9NX31 292 aa17.28■□□□□ 0.36
CHMP5-201ENST00000223500 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.28■□□□□ 0.36
CHMP5-201ENST00000223500 HYOU1Q9Y4L1 999 aa17.28■□□□□ 0.36
CHMP5-201ENST00000223500 DENND4CQ5VZ89 1909 aa17.28■□□□□ 0.36
CHMP5-201ENST00000223500 DOCK6Q96HP0 2047 aa17.27■□□□□ 0.36
CHMP5-201ENST00000223500 TLR5O60602 858 aa17.27■□□□□ 0.36
CHMP5-201ENST00000223500 LRCH4O75427 683 aa17.27■□□□□ 0.36
CHMP5-201ENST00000223500 ENDOD1O94919 500 aa17.27■□□□□ 0.36
CHMP5-201ENST00000223500 TRUB2O95900 331 aaKnown RBP17.27■□□□□ 0.36
CHMP5-201ENST00000223500 MYL4P12829 197 aa17.27■□□□□ 0.36
CHMP5-201ENST00000223500 IGFBP4P22692 258 aa17.27■□□□□ 0.36
CHMP5-201ENST00000223500 RDXP35241 583 aaKnown RBP17.27■□□□□ 0.36
CHMP5-201ENST00000223500 GTF2F1P35269 517 aaKnown RBP eCLIP17.27■□□□□ 0.36
CHMP5-201ENST00000223500 PGFP49763 221 aa17.27■□□□□ 0.36
CHMP5-201ENST00000223500 TUBP50607 506 aa17.27■□□□□ 0.36
CHMP5-201ENST00000223500 C10orf120Q5SQS8 335 aa17.27■□□□□ 0.36
CHMP5-201ENST00000223500 MSANTD2Q6P1R3 559 aa17.27■□□□□ 0.36
CHMP5-201ENST00000223500 PDZD4Q76G19 769 aaPredicted RBP17.27■□□□□ 0.36
CHMP5-201ENST00000223500 TMC8Q8IU68 726 aa17.27■□□□□ 0.36
CHMP5-201ENST00000223500 RHOT1Q8IXI2 618 aa17.27■□□□□ 0.36
CHMP5-201ENST00000223500 HS6ST3Q8IZP7 471 aa17.27■□□□□ 0.36
CHMP5-201ENST00000223500 DQX1Q8TE96 717 aaKnown RBP17.27■□□□□ 0.36
CHMP5-201ENST00000223500 PGAP3Q96FM1 320 aaPredicted RBP17.27■□□□□ 0.36
CHMP5-201ENST00000223500 SERPINB11Q96P15 392 aa17.27■□□□□ 0.36
CHMP5-201ENST00000223500 LRRC3Q9BY71 257 aa17.27■□□□□ 0.36
CHMP5-201ENST00000223500 NACA2Q9H009 215 aa17.27■□□□□ 0.36
CHMP5-201ENST00000223500 SMOC2Q9H3U7 446 aa17.27■□□□□ 0.36
CHMP5-201ENST00000223500 IL21Q9HBE4 155 aa17.27■□□□□ 0.36
CHMP5-201ENST00000223500 DDIT4Q9NX09 232 aa17.27■□□□□ 0.36
CHMP5-201ENST00000223500 MTCH2Q9Y6C9 303 aa17.27■□□□□ 0.36
CHMP5-201ENST00000223500 CCDC66A2RUB6 948 aa17.26■□□□□ 0.35
CHMP5-201ENST00000223500 SOX1O00570 391 aaPredicted RBP17.26■□□□□ 0.35
CHMP5-201ENST00000223500 ZNF197O14709 1029 aa17.26■□□□□ 0.35
CHMP5-201ENST00000223500 PRPSAP2O60256 369 aa17.26■□□□□ 0.35
CHMP5-201ENST00000223500 MIPP30301 263 aa17.26■□□□□ 0.35
CHMP5-201ENST00000223500 ATP5C1P36542 298 aaKnown RBP17.26■□□□□ 0.35
CHMP5-201ENST00000223500 EPHA5P54756 1037 aa17.26■□□□□ 0.35
CHMP5-201ENST00000223500 NME3Q13232 169 aa17.26■□□□□ 0.35
CHMP5-201ENST00000223500 DNTTIP2Q5QJE6 756 aaKnown RBP17.26■□□□□ 0.35
CHMP5-201ENST00000223500 LRRC38Q5VT99 294 aa17.26■□□□□ 0.35
CHMP5-201ENST00000223500 SCYL2Q6P3W7 929 aa17.26■□□□□ 0.35
CHMP5-201ENST00000223500 TAC4Q86UU9 113 aa17.26■□□□□ 0.35
CHMP5-201ENST00000223500 VN1R2Q8NFZ6 395 aa17.26■□□□□ 0.35
CHMP5-201ENST00000223500 KIF18AQ8NI77 898 aa17.26■□□□□ 0.35
CHMP5-201ENST00000223500 SMG7Q92540 1137 aaKnown RBP17.26■□□□□ 0.35
CHMP5-201ENST00000223500 ZNF592Q92610 1267 aa17.26■□□□□ 0.35
CHMP5-201ENST00000223500 LRCH3Q96II8 777 aa17.26■□□□□ 0.35
CHMP5-201ENST00000223500 ATXN3LQ9H3M9 355 aa17.26■□□□□ 0.35
CHMP5-201ENST00000223500 OBSL1O75147 1896 aa17.26■□□□□ 0.35
CHMP5-201ENST00000223500 SYNJ2BP-COX16A0A087WUM0 186 aa17.25■□□□□ 0.35
CHMP5-201ENST00000223500 PSTPIP1O43586 416 aa17.25■□□□□ 0.35
CHMP5-201ENST00000223500 TADA3O75528 432 aa17.25■□□□□ 0.35
CHMP5-201ENST00000223500 PAPLNO95428 1278 aa17.25■□□□□ 0.35
CHMP5-201ENST00000223500 RHOP08100 348 aa17.25■□□□□ 0.35
CHMP5-201ENST00000223500 KRT7P08729 469 aa17.25■□□□□ 0.35
CHMP5-201ENST00000223500 HOXB8P17481 243 aaPredicted RBP17.25■□□□□ 0.35
CHMP5-201ENST00000223500 PFKLP17858 780 aa17.25■□□□□ 0.35
CHMP5-201ENST00000223500 CTNNA2P26232 953 aa17.25■□□□□ 0.35
CHMP5-201ENST00000223500 KPNA1P52294 538 aaPredicted RBP17.25■□□□□ 0.35
CHMP5-201ENST00000223500 HDAC4P56524 1084 aa17.25■□□□□ 0.35
CHMP5-201ENST00000223500 RBM10P98175 930 aaKnown RBP17.25■□□□□ 0.35
CHMP5-201ENST00000223500 EFEMP1Q12805 493 aa17.25■□□□□ 0.35
CHMP5-201ENST00000223500 SH3PXD2AQ5TCZ1 1133 aa17.25■□□□□ 0.35
CHMP5-201ENST00000223500 KLHDC10Q6PID8 442 aa17.25■□□□□ 0.35
CHMP5-201ENST00000223500 ADAM32Q8TC27 787 aa17.25■□□□□ 0.35
CHMP5-201ENST00000223500 ZNF707Q96C28 371 aaPredicted RBP17.25■□□□□ 0.35
CHMP5-201ENST00000223500 HES6Q96HZ4 224 aa17.25■□□□□ 0.35
CHMP5-201ENST00000223500 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.25■□□□□ 0.35
CHMP5-201ENST00000223500 MARCH2Q9P0N8 246 aa17.25■□□□□ 0.35
CHMP5-201ENST00000223500 COX16Q9P0S2 106 aa17.25■□□□□ 0.35
CHMP5-201ENST00000223500 DNMT3BQ9UBC3 853 aaKnown RBP17.25■□□□□ 0.35
CHMP5-201ENST00000223500 DNMT3LQ9UJW3 386 aa17.25■□□□□ 0.35
CHMP5-201ENST00000223500 NUDT5Q9UKK9 219 aa17.25■□□□□ 0.35
CHMP5-201ENST00000223500 USP18Q9UMW8 372 aa17.25■□□□□ 0.35
CHMP5-201ENST00000223500 ENC1O14682 589 aa17.24■□□□□ 0.35
CHMP5-201ENST00000223500 IRAK2O43187 625 aa17.24■□□□□ 0.35
CHMP5-201ENST00000223500 TFE3P19532 575 aaPredicted RBP17.24■□□□□ 0.35
CHMP5-201ENST00000223500 CTNNA1P35221 906 aaKnown RBP17.24■□□□□ 0.35
CHMP5-201ENST00000223500 PITX1P78337 314 aaPredicted RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms