RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 PIN4Q9Y237 131 aaKnown RBP23.07■■□□□ 1.28
CCDC9-201ENST00000221922 TCRBV7S3A2A0A539 114 aa23.06■■□□□ 1.28
CCDC9-201ENST00000221922 GRAP2O75791 330 aa23.06■■□□□ 1.28
CCDC9-201ENST00000221922 CYP2B6P20813 491 aa23.06■■□□□ 1.28
CCDC9-201ENST00000221922 CLNS1AP54105 237 aaKnown RBP23.06■■□□□ 1.28
CCDC9-201ENST00000221922 BASP1P80723 227 aaKnown RBP23.06■■□□□ 1.28
CCDC9-201ENST00000221922 CRYMQ14894 314 aa23.06■■□□□ 1.28
CCDC9-201ENST00000221922 NGRNQ9NPE2 291 aaKnown RBP23.06■■□□□ 1.28
CCDC9-201ENST00000221922 GJD2Q9UKL4 321 aa23.06■■□□□ 1.28
CCDC9-201ENST00000221922 TRIP12Q14669 1992 aaPredicted RBP23.05■■□□□ 1.28
CCDC9-201ENST00000221922 CFAP69A5D8W1 941 aa23.05■■□□□ 1.28
CCDC9-201ENST00000221922 DIAPH2O60879 1101 aa23.05■■□□□ 1.28
CCDC9-201ENST00000221922 CD4P01730 458 aa23.05■■□□□ 1.28
CCDC9-201ENST00000221922 CRYBB1P53674 252 aaPredicted RBP23.05■■□□□ 1.28
CCDC9-201ENST00000221922 XKR4Q5GH76 650 aa23.05■■□□□ 1.28
CCDC9-201ENST00000221922 PALM2Q8IXS6 379 aa23.05■■□□□ 1.28
CCDC9-201ENST00000221922 NME8Q8N427 588 aa23.05■■□□□ 1.28
CCDC9-201ENST00000221922 FAM49BQ9NUQ9 324 aa23.05■■□□□ 1.28
CCDC9-201ENST00000221922 C17orf102A2RUQ5 167 aa23.05■■□□□ 1.28
CCDC9-201ENST00000221922 ZNF487B1APH4 448 aa23.05■■□□□ 1.28
CCDC9-201ENST00000221922 H7C0C1 242 aa23.05■■□□□ 1.28
CCDC9-201ENST00000221922 APOL1O14791 398 aa23.05■■□□□ 1.28
CCDC9-201ENST00000221922 ATP5OP48047 213 aa23.05■■□□□ 1.28
CCDC9-201ENST00000221922 RASSF2P50749 326 aa23.05■■□□□ 1.28
CCDC9-201ENST00000221922 BEX3Q00994 111 aa23.05■■□□□ 1.28
CCDC9-201ENST00000221922 GLRA4Q5JXX5 417 aa23.05■■□□□ 1.28
CCDC9-201ENST00000221922 FYB2Q5VWT5 728 aa23.05■■□□□ 1.28
CCDC9-201ENST00000221922 SCYL2Q6P3W7 929 aa23.05■■□□□ 1.28
CCDC9-201ENST00000221922 NLRP9Q7RTR0 991 aa23.05■■□□□ 1.28
CCDC9-201ENST00000221922 OR6B3Q8NGW1 331 aa23.05■■□□□ 1.28
CCDC9-201ENST00000221922 TCP10LQ8TDR4 215 aa23.05■■□□□ 1.28
CCDC9-201ENST00000221922 FAM172AQ8WUF8 416 aa23.05■■□□□ 1.28
CCDC9-201ENST00000221922 SAR1AQ9NR31 198 aa23.05■■□□□ 1.28
CCDC9-201ENST00000221922 NME7Q9Y5B8 376 aa23.05■■□□□ 1.28
CCDC9-201ENST00000221922 PIRO00625 290 aa23.04■■□□□ 1.28
CCDC9-201ENST00000221922 MDM4O15151 490 aa23.04■■□□□ 1.28
CCDC9-201ENST00000221922 XPOTO43592 962 aaKnown RBP23.04■■□□□ 1.28
CCDC9-201ENST00000221922 GNAT1P11488 350 aa23.04■■□□□ 1.28
CCDC9-201ENST00000221922 KCNE1P15382 129 aa23.04■■□□□ 1.28
CCDC9-201ENST00000221922 UBXN11Q5T124 520 aa23.04■■□□□ 1.28
CCDC9-201ENST00000221922 NPNTQ6UXI9 565 aa23.04■■□□□ 1.28
CCDC9-201ENST00000221922 ZC3H18Q86VM9 953 aaKnown RBP23.04■■□□□ 1.28
CCDC9-201ENST00000221922 IFNL1Q8IU54 200 aa23.04■■□□□ 1.28
CCDC9-201ENST00000221922 PAK5Q9P286 719 aa23.04■■□□□ 1.28
CCDC9-201ENST00000221922 A8MXQ7 604 aa23.04■■□□□ 1.28
CCDC9-201ENST00000221922 CHADO15335 359 aa23.04■■□□□ 1.28
CCDC9-201ENST00000221922 AKAP5P24588 427 aa23.04■■□□□ 1.28
CCDC9-201ENST00000221922 SCNN1AP37088 669 aa23.04■■□□□ 1.28
CCDC9-201ENST00000221922 ZNF200P98182 395 aaPredicted RBP23.04■■□□□ 1.28
CCDC9-201ENST00000221922 CBLBQ13191 982 aa23.04■■□□□ 1.28
CCDC9-201ENST00000221922 FSCN1Q16658 493 aaKnown RBP23.04■■□□□ 1.28
CCDC9-201ENST00000221922 BBS9Q3SYG4 887 aa23.04■■□□□ 1.28
CCDC9-201ENST00000221922 PLEKHG4Q58EX7 1191 aa23.04■■□□□ 1.28
CCDC9-201ENST00000221922 PLD5Q8N7P1 536 aa23.04■■□□□ 1.28
CCDC9-201ENST00000221922 MIEF2Q96C03 454 aa23.04■■□□□ 1.28
CCDC9-201ENST00000221922 ZNF560Q96MR9 790 aa23.04■■□□□ 1.28
CCDC9-201ENST00000221922 ZNF570Q96NI8 536 aa23.04■■□□□ 1.28
CCDC9-201ENST00000221922 ZNF670Q9BS34 389 aa23.04■■□□□ 1.28
CCDC9-201ENST00000221922 TBC1D10AQ9BXI6 508 aa23.04■■□□□ 1.28
CCDC9-201ENST00000221922 FRMD8Q9BZ67 464 aaPredicted RBP23.04■■□□□ 1.28
CCDC9-201ENST00000221922 PCDH18Q9HCL0 1135 aa23.04■■□□□ 1.28
CCDC9-201ENST00000221922 SMIM28A0A1B0GU29 152 aa23.03■■□□□ 1.28
CCDC9-201ENST00000221922 PAPSS1O43252 624 aaPredicted RBP23.03■■□□□ 1.28
CCDC9-201ENST00000221922 PURAQ00577 322 aaKnown RBP23.03■■□□□ 1.28
CCDC9-201ENST00000221922 SEPT7Q16181 437 aaKnown RBP23.03■■□□□ 1.28
CCDC9-201ENST00000221922 SOWAHAQ2M3V2 549 aa23.03■■□□□ 1.28
CCDC9-201ENST00000221922 RAB6CQ53S08 254 aa23.03■■□□□ 1.28
CCDC9-201ENST00000221922 FBXO47Q5MNV8 452 aa23.03■■□□□ 1.28
CCDC9-201ENST00000221922 RTP4Q96DX8 246 aa23.03■■□□□ 1.28
CCDC9-201ENST00000221922 CYTH2Q99418 400 aa23.03■■□□□ 1.28
CCDC9-201ENST00000221922 APOL6Q9BWW8 343 aa23.03■■□□□ 1.28
CCDC9-201ENST00000221922 RAB6CQ9H0N0 254 aa23.03■■□□□ 1.28
CCDC9-201ENST00000221922 TLE6Q9H808 572 aa23.03■■□□□ 1.28
CCDC9-201ENST00000221922 NPHS2Q9NP85 383 aa23.03■■□□□ 1.28
CCDC9-201ENST00000221922 LNPEPQ9UIQ6 1025 aa23.03■■□□□ 1.28
CCDC9-201ENST00000221922 CAPN15O75808 1086 aa23.02■■□□□ 1.28
CCDC9-201ENST00000221922 TROVE2P10155 538 aaKnown RBP eCLIP23.02■■□□□ 1.28
CCDC9-201ENST00000221922 PNPLA4P41247 253 aa23.02■■□□□ 1.28
CCDC9-201ENST00000221922 PTPN9P43378 593 aa23.02■■□□□ 1.28
CCDC9-201ENST00000221922 BCAT1P54687 386 aa23.02■■□□□ 1.28
CCDC9-201ENST00000221922 BCAR1P56945 870 aa23.02■■□□□ 1.28
CCDC9-201ENST00000221922 INHBEP58166 350 aa23.02■■□□□ 1.28
CCDC9-201ENST00000221922 BST2Q10589 180 aaKnown RBP23.02■■□□□ 1.28
CCDC9-201ENST00000221922 TAF1BQ53T94 588 aaPredicted RBP23.02■■□□□ 1.28
CCDC9-201ENST00000221922 SLC9A4Q6AI14 798 aa23.02■■□□□ 1.28
CCDC9-201ENST00000221922 C1orf228Q6PIY5 440 aa23.02■■□□□ 1.28
CCDC9-201ENST00000221922 ARCQ7LC44 396 aa23.02■■□□□ 1.28
CCDC9-201ENST00000221922 SCUBE3Q8IX30 993 aa23.02■■□□□ 1.28
CCDC9-201ENST00000221922 FAM13CQ8NE31 585 aa23.02■■□□□ 1.28
CCDC9-201ENST00000221922 KHSRPQ92945 711 aaKnown RBP eCLIP23.02■■□□□ 1.28
CCDC9-201ENST00000221922 ANKRD27Q96NW4 1050 aa23.02■■□□□ 1.28
CCDC9-201ENST00000221922 SNRNP25Q9BV90 132 aaKnown RBP23.02■■□□□ 1.28
CCDC9-201ENST00000221922 BATF3Q9NR55 127 aa23.02■■□□□ 1.28
CCDC9-201ENST00000221922 GDAP2Q9NXN4 497 aa23.02■■□□□ 1.28
CCDC9-201ENST00000221922 KANSL3Q9P2N6 904 aa23.02■■□□□ 1.28
CCDC9-201ENST00000221922 ZFP69BQ9UJL9 534 aa23.02■■□□□ 1.28
CCDC9-201ENST00000221922 HNRNPCL1O60812 293 aaKnown RBP23.02■■□□□ 1.28
CCDC9-201ENST00000221922 SPAG6O75602 509 aa23.02■■□□□ 1.28
CCDC9-201ENST00000221922 PIAS1O75925 651 aa23.02■■□□□ 1.28
CCDC9-201ENST00000221922 DHRS4L1P0CG22 281 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms