RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 PDLIM2Q96JY6 352 aa21.1■□□□□ 0.97
RHBDD3-201ENST00000216085 ZFP14Q9HCL3 533 aa21.1■□□□□ 0.97
RHBDD3-201ENST00000216085 TDP1Q9NUW8 608 aa21.1■□□□□ 0.97
RHBDD3-201ENST00000216085 TMEM51Q9NW97 253 aa21.1■□□□□ 0.97
RHBDD3-201ENST00000216085 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.1■□□□□ 0.97
RHBDD3-201ENST00000216085 RASAL2Q9UJF2 1139 aa21.1■□□□□ 0.97
RHBDD3-201ENST00000216085 ARHGAP26Q9UNA1 814 aa21.1■□□□□ 0.97
RHBDD3-201ENST00000216085 EPN1Q9Y6I3 576 aaPredicted RBP21.1■□□□□ 0.97
RHBDD3-201ENST00000216085 EIF3CLB5ME19 914 aaKnown RBP21.1■□□□□ 0.97
RHBDD3-201ENST00000216085 NRG2O14511 850 aaPredicted RBP21.1■□□□□ 0.97
RHBDD3-201ENST00000216085 NDUFA10O95299 355 aa21.1■□□□□ 0.97
RHBDD3-201ENST00000216085 KPNA1P52294 538 aaPredicted RBP21.1■□□□□ 0.97
RHBDD3-201ENST00000216085 FAM78AQ5JUQ0 283 aa21.1■□□□□ 0.97
RHBDD3-201ENST00000216085 MSANTD2Q6P1R3 559 aa21.1■□□□□ 0.97
RHBDD3-201ENST00000216085 CELF5Q8N6W0 485 aaKnown RBP21.1■□□□□ 0.97
RHBDD3-201ENST00000216085 ZSWIM3Q96MP5 696 aa21.1■□□□□ 0.97
RHBDD3-201ENST00000216085 SERPINB11Q96P15 392 aa21.1■□□□□ 0.97
RHBDD3-201ENST00000216085 SLC2A13Q96QE2 648 aa21.1■□□□□ 0.97
RHBDD3-201ENST00000216085 EIF3CQ99613 913 aaKnown RBP21.1■□□□□ 0.97
RHBDD3-201ENST00000216085 TRPV4Q9HBA0 871 aa21.1■□□□□ 0.97
RHBDD3-201ENST00000216085 MARCH2Q9P0N8 246 aa21.1■□□□□ 0.97
RHBDD3-201ENST00000216085 NENFQ9UMX5 172 aa21.1■□□□□ 0.97
RHBDD3-201ENST00000216085 ANAPC1Q9H1A4 1944 aa21.1■□□□□ 0.97
RHBDD3-201ENST00000216085 SIGLEC16A6NMB1 481 aa21.09■□□□□ 0.97
RHBDD3-201ENST00000216085 NOS2P35228 1153 aa21.09■□□□□ 0.97
RHBDD3-201ENST00000216085 MATKP42679 507 aa21.09■□□□□ 0.97
RHBDD3-201ENST00000216085 GPC5P78333 572 aa21.09■□□□□ 0.97
RHBDD3-201ENST00000216085 COG7P83436 770 aa21.09■□□□□ 0.97
RHBDD3-201ENST00000216085 TAF5Q15542 800 aa21.09■□□□□ 0.97
RHBDD3-201ENST00000216085 PHLDB2Q86SQ0 1253 aa21.09■□□□□ 0.97
RHBDD3-201ENST00000216085 MIB1Q86YT6 1006 aa21.09■□□□□ 0.97
RHBDD3-201ENST00000216085 LRRC8AQ8IWT6 810 aa21.09■□□□□ 0.97
RHBDD3-201ENST00000216085 DEFB106AQ8N104 65 aa21.09■□□□□ 0.97
RHBDD3-201ENST00000216085 NXPE3Q969Y0 559 aa21.09■□□□□ 0.97
RHBDD3-201ENST00000216085 CYP2S1Q96SQ9 504 aa21.09■□□□□ 0.97
RHBDD3-201ENST00000216085 SMOC2Q9H3U7 446 aa21.09■□□□□ 0.97
RHBDD3-201ENST00000216085 NUDT5Q9UKK9 219 aa21.09■□□□□ 0.97
RHBDD3-201ENST00000216085 NAALADL1Q9UQQ1 740 aa21.09■□□□□ 0.97
RHBDD3-201ENST00000216085 CPQQ9Y646 472 aa21.09■□□□□ 0.97
RHBDD3-201ENST00000216085 C5orf42Q9H799 3197 aa21.09■□□□□ 0.97
RHBDD3-201ENST00000216085 ARHGAP6O43182 974 aa21.08■□□□□ 0.97
RHBDD3-201ENST00000216085 LCA5LO95447 670 aa21.08■□□□□ 0.97
RHBDD3-201ENST00000216085 SDC4P31431 198 aa21.08■□□□□ 0.97
RHBDD3-201ENST00000216085 GBP1P32455 592 aa21.08■□□□□ 0.97
RHBDD3-201ENST00000216085 GALCP54803 685 aa21.08■□□□□ 0.97
RHBDD3-201ENST00000216085 KRT83P78385 493 aa21.08■□□□□ 0.97
RHBDD3-201ENST00000216085 SLC22A12Q96S37 553 aa21.08■□□□□ 0.97
RHBDD3-201ENST00000216085 RNF38Q9H0F5 515 aa21.08■□□□□ 0.97
RHBDD3-201ENST00000216085 THAP2Q9H0W7 228 aa21.08■□□□□ 0.97
RHBDD3-201ENST00000216085 FAM204AQ9H8W3 233 aa21.08■□□□□ 0.97
RHBDD3-201ENST00000216085 OBP2AQ9NY56 170 aa21.08■□□□□ 0.97
RHBDD3-201ENST00000216085 MYO1AQ9UBC5 1043 aa21.08■□□□□ 0.97
RHBDD3-201ENST00000216085 INTUQ9ULD6 942 aa21.08■□□□□ 0.97
RHBDD3-201ENST00000216085 DOCK8Q8NF50 2099 aa21.08■□□□□ 0.96
RHBDD3-201ENST00000216085 TBX18O95935 607 aa21.08■□□□□ 0.96
RHBDD3-201ENST00000216085 PLEKHA7Q6IQ23 1121 aa21.08■□□□□ 0.96
RHBDD3-201ENST00000216085 TMEM139Q8IV31 216 aa21.08■□□□□ 0.96
RHBDD3-201ENST00000216085 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.08■□□□□ 0.96
RHBDD3-201ENST00000216085 ELSPBP1Q96BH3 223 aa21.08■□□□□ 0.96
RHBDD3-201ENST00000216085 MCEEQ96PE7 176 aa21.08■□□□□ 0.96
RHBDD3-201ENST00000216085 SMPD4Q9NXE4 827 aa21.08■□□□□ 0.96
RHBDD3-201ENST00000216085 IGSF9Q9P2J2 1179 aa21.08■□□□□ 0.96
RHBDD3-201ENST00000216085 TMEM59LQ9UK28 342 aa21.08■□□□□ 0.96
RHBDD3-201ENST00000216085 LSM7Q9UK45 103 aaKnown RBP21.08■□□□□ 0.96
RHBDD3-201ENST00000216085 HBS1LQ9Y450 684 aaKnown RBP21.08■□□□□ 0.96
RHBDD3-201ENST00000216085 NUP210Q8TEM1 1887 aaPredicted RBP21.07■□□□□ 0.96
RHBDD3-201ENST00000216085 ATMINO43313 823 aaPredicted RBP21.07■□□□□ 0.96
RHBDD3-201ENST00000216085 TMEM253P0C7T8 217 aa21.07■□□□□ 0.96
RHBDD3-201ENST00000216085 MAGEA1P43355 309 aa21.07■□□□□ 0.96
RHBDD3-201ENST00000216085 ZP2Q05996 745 aa21.07■□□□□ 0.96
RHBDD3-201ENST00000216085 NNTQ13423 1086 aa21.07■□□□□ 0.96
RHBDD3-201ENST00000216085 MAMLD1Q13495 774 aa21.07■□□□□ 0.96
RHBDD3-201ENST00000216085 DQX1Q8TE96 717 aaKnown RBP21.07■□□□□ 0.96
RHBDD3-201ENST00000216085 USP13Q92995 863 aaPredicted RBP21.07■□□□□ 0.96
RHBDD3-201ENST00000216085 SH3BP1Q9Y3L3 701 aa21.07■□□□□ 0.96
RHBDD3-201ENST00000216085 PAXBP1Q9Y5B6 917 aa21.07■□□□□ 0.96
RHBDD3-201ENST00000216085 LOC730098B7Z3J9 87 aa21.06■□□□□ 0.96
RHBDD3-201ENST00000216085 ECI2O75521 394 aa21.06■□□□□ 0.96
RHBDD3-201ENST00000216085 PRAMEF12O95522 483 aa21.06■□□□□ 0.96
RHBDD3-201ENST00000216085 FYNP06241 537 aa21.06■□□□□ 0.96
RHBDD3-201ENST00000216085 SND1Q7KZF4 910 aaKnown RBP eCLIP21.06■□□□□ 0.963e-6■□□□□ 11.1
RHBDD3-201ENST00000216085 DNAAF5Q86Y56 855 aa21.06■□□□□ 0.96
RHBDD3-201ENST00000216085 TTC16Q8NEE8 873 aa21.06■□□□□ 0.96
RHBDD3-201ENST00000216085 DEPDC1BQ8WUY9 529 aa21.06■□□□□ 0.96
RHBDD3-201ENST00000216085 SMG9Q9H0W8 520 aaKnown RBP21.06■□□□□ 0.96
RHBDD3-201ENST00000216085 THG1LQ9NWX6 298 aaKnown RBP21.06■□□□□ 0.96
RHBDD3-201ENST00000216085 SLC12A8A0AV02 714 aa21.05■□□□□ 0.96
RHBDD3-201ENST00000216085 MDM4O15151 490 aa21.05■□□□□ 0.96
RHBDD3-201ENST00000216085 TRUB2O95900 331 aaKnown RBP21.05■□□□□ 0.96
RHBDD3-201ENST00000216085 CYP1A2P05177 515 aa21.05■□□□□ 0.96
RHBDD3-201ENST00000216085 BMP1P13497 986 aa21.05■□□□□ 0.96
RHBDD3-201ENST00000216085 TCF3P15923 654 aa21.05■□□□□ 0.96
RHBDD3-201ENST00000216085 PDGFRAP16234 1089 aa21.05■□□□□ 0.96
RHBDD3-201ENST00000216085 GPD1P21695 349 aa21.05■□□□□ 0.96
RHBDD3-201ENST00000216085 FLT3P36888 993 aa21.05■□□□□ 0.96
RHBDD3-201ENST00000216085 SULT1E1P49888 294 aa21.05■□□□□ 0.96
RHBDD3-201ENST00000216085 SLC25A52Q3SY17 297 aa21.05■□□□□ 0.96
RHBDD3-201ENST00000216085 TJAP1Q5JTD0 557 aa21.05■□□□□ 0.96
RHBDD3-201ENST00000216085 SYPL2Q5VXT5 272 aa21.05■□□□□ 0.96
RHBDD3-201ENST00000216085 CC2D1AQ6P1N0 951 aaPredicted RBP21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms