RNA–Protein interactions for RNA: ENST00000215587.11

POLR2E-201, Transcript of RNA polymerase II subunit E, humanhuman

TSL 3

Gene POLR2E, Length 1,286 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-201ENST00000215587 PER2O15055 1255 aa17.3■□□□□ 0.36
POLR2E-201ENST00000215587 PSTPIP1O43586 416 aa17.3■□□□□ 0.36
POLR2E-201ENST00000215587 LRCH4O75427 683 aa17.3■□□□□ 0.36
POLR2E-201ENST00000215587 URI1O94763 535 aaPredicted RBP17.3■□□□□ 0.36
POLR2E-201ENST00000215587 FYNP06241 537 aa17.3■□□□□ 0.36
POLR2E-201ENST00000215587 HNRNPA1P09651 372 aaKnown RBP eCLIP17.3■□□□□ 0.36
POLR2E-201ENST00000215587 EPCAMP16422 314 aa17.3■□□□□ 0.36
POLR2E-201ENST00000215587 TCP1P17987 556 aaKnown RBP17.3■□□□□ 0.36
POLR2E-201ENST00000215587 HOXA9P31269 272 aa17.3■□□□□ 0.36
POLR2E-201ENST00000215587 GJC1P36383 396 aa17.3■□□□□ 0.36
POLR2E-201ENST00000215587 PPP3CCP48454 512 aa17.3■□□□□ 0.36
POLR2E-201ENST00000215587 NRIP1P48552 1158 aa17.3■□□□□ 0.36
POLR2E-201ENST00000215587 DEUP1Q05D60 604 aa17.3■□□□□ 0.36
POLR2E-201ENST00000215587 DUSP6Q16828 381 aa17.3■□□□□ 0.36
POLR2E-201ENST00000215587 LRRC38Q5VT99 294 aa17.3■□□□□ 0.36
POLR2E-201ENST00000215587 PAPD7Q5XG87 772 aaKnown RBP17.3■□□□□ 0.36
POLR2E-201ENST00000215587 DNAJB7Q7Z6W7 309 aaPredicted RBP17.3■□□□□ 0.36
POLR2E-201ENST00000215587 ADGRD2Q7Z7M1 963 aa17.3■□□□□ 0.36
POLR2E-201ENST00000215587 CENPIQ92674 756 aaPredicted RBP17.3■□□□□ 0.36
POLR2E-201ENST00000215587 CD101Q93033 1021 aa17.3■□□□□ 0.36
POLR2E-201ENST00000215587 NT5C3BQ969T7 300 aa17.3■□□□□ 0.36
POLR2E-201ENST00000215587 CDK5RAP1Q96SZ6 601 aaKnown RBP17.3■□□□□ 0.36
POLR2E-201ENST00000215587 FAM204AQ9H8W3 233 aa17.3■□□□□ 0.36
POLR2E-201ENST00000215587 NMUR1Q9HB89 426 aa17.3■□□□□ 0.36
POLR2E-201ENST00000215587 SNX12Q9UMY4 172 aa17.3■□□□□ 0.36
POLR2E-201ENST00000215587 PIEZO1Q92508 2521 aa17.3■□□□□ 0.36
POLR2E-201ENST00000215587 MYO16Q9Y6X6 1858 aa17.3■□□□□ 0.36
POLR2E-201ENST00000215587 M0QYT0 321 aa17.29■□□□□ 0.36
POLR2E-201ENST00000215587 PRPSAP2O60256 369 aa17.29■□□□□ 0.36
POLR2E-201ENST00000215587 XYLBO75191 536 aa17.29■□□□□ 0.36
POLR2E-201ENST00000215587 F9P00740 461 aa17.29■□□□□ 0.36
POLR2E-201ENST00000215587 KRT7P08729 469 aa17.29■□□□□ 0.36
POLR2E-201ENST00000215587 ZDHHC11BP0C7U3 371 aa17.29■□□□□ 0.36
POLR2E-201ENST00000215587 GBP1P32455 592 aa17.29■□□□□ 0.36
POLR2E-201ENST00000215587 RDXP35241 583 aaKnown RBP17.29■□□□□ 0.36
POLR2E-201ENST00000215587 TUBB2AQ13885 445 aa17.29■□□□□ 0.36
POLR2E-201ENST00000215587 GRIN2CQ14957 1233 aa17.29■□□□□ 0.36
POLR2E-201ENST00000215587 PABPC1LQ4VXU2 614 aaKnown RBP17.29■□□□□ 0.36
POLR2E-201ENST00000215587 ZFYVE27Q5T4F4 411 aa17.29■□□□□ 0.36
POLR2E-201ENST00000215587 SH3PXD2AQ5TCZ1 1133 aa17.29■□□□□ 0.36
POLR2E-201ENST00000215587 DAB2IPQ5VWQ8 1189 aa17.29■□□□□ 0.36
POLR2E-201ENST00000215587 SCYL2Q6P3W7 929 aa17.29■□□□□ 0.36
POLR2E-201ENST00000215587 SND1Q7KZF4 910 aaKnown RBP eCLIP17.29■□□□□ 0.36
POLR2E-201ENST00000215587 POLNQ7Z5Q5 900 aa17.29■□□□□ 0.36
POLR2E-201ENST00000215587 TADA2BQ86TJ2 420 aa17.29■□□□□ 0.36
POLR2E-201ENST00000215587 DQX1Q8TE96 717 aaKnown RBP17.29■□□□□ 0.36
POLR2E-201ENST00000215587 GCNAQ96QF7 691 aa17.29■□□□□ 0.36
POLR2E-201ENST00000215587 TUBB2BQ9BVA1 445 aa17.29■□□□□ 0.36
POLR2E-201ENST00000215587 TMEM51Q9NW97 253 aa17.29■□□□□ 0.36
POLR2E-201ENST00000215587 DDIT4Q9NX09 232 aa17.29■□□□□ 0.36
POLR2E-201ENST00000215587 USP18Q9UMW8 372 aa17.29■□□□□ 0.36
POLR2E-201ENST00000215587 PCDHA3Q9Y5H8 950 aa17.29■□□□□ 0.36
POLR2E-201ENST00000215587 HCFC2Q9Y5Z7 792 aa17.29■□□□□ 0.36
POLR2E-201ENST00000215587 SAR1BQ9Y6B6 198 aa17.29■□□□□ 0.36
POLR2E-201ENST00000215587 SYNJ2BP-COX16A0A087WUM0 186 aa17.28■□□□□ 0.36
POLR2E-201ENST00000215587 KCNK3O14649 394 aa17.28■□□□□ 0.36
POLR2E-201ENST00000215587 CCL16O15467 120 aa17.28■□□□□ 0.36
POLR2E-201ENST00000215587 DDX3YO15523 660 aaKnown RBP17.28■□□□□ 0.36
POLR2E-201ENST00000215587 RARGP13631 454 aa17.28■□□□□ 0.36
POLR2E-201ENST00000215587 PRLRP16471 622 aa17.28■□□□□ 0.36
POLR2E-201ENST00000215587 TFE3P19532 575 aaPredicted RBP17.28■□□□□ 0.36
POLR2E-201ENST00000215587 MIPP30301 263 aa17.28■□□□□ 0.36
POLR2E-201ENST00000215587 HDAC4P56524 1084 aa17.28■□□□□ 0.36
POLR2E-201ENST00000215587 RWDD2BP57060 319 aa17.28■□□□□ 0.36
POLR2E-201ENST00000215587 TAS2R40P59535 323 aa17.28■□□□□ 0.36
POLR2E-201ENST00000215587 NME3Q13232 169 aa17.28■□□□□ 0.36
POLR2E-201ENST00000215587 ODF2Q5BJF6 829 aa17.28■□□□□ 0.36
POLR2E-201ENST00000215587 C10orf120Q5SQS8 335 aa17.28■□□□□ 0.36
POLR2E-201ENST00000215587 MSANTD2Q6P1R3 559 aa17.28■□□□□ 0.36
POLR2E-201ENST00000215587 ARFGAP1Q8N6T3 406 aa17.28■□□□□ 0.36
POLR2E-201ENST00000215587 ADAMTS19Q8TE59 1207 aa17.28■□□□□ 0.36
POLR2E-201ENST00000215587 KRT35Q92764 455 aa17.28■□□□□ 0.36
POLR2E-201ENST00000215587 PGAP3Q96FM1 320 aaPredicted RBP17.28■□□□□ 0.36
POLR2E-201ENST00000215587 PBKQ96KB5 322 aa17.28■□□□□ 0.36
POLR2E-201ENST00000215587 ASB2Q96Q27 587 aa17.28■□□□□ 0.36
POLR2E-201ENST00000215587 OSBPL9Q96SU4 736 aa17.28■□□□□ 0.36
POLR2E-201ENST00000215587 PSMB7Q99436 277 aa17.28■□□□□ 0.36
POLR2E-201ENST00000215587 SMOC2Q9H3U7 446 aa17.28■□□□□ 0.36
POLR2E-201ENST00000215587 NSUN3Q9H649 340 aaKnown RBP17.28■□□□□ 0.36
POLR2E-201ENST00000215587 ZWILCHQ9H900 591 aa17.28■□□□□ 0.36
POLR2E-201ENST00000215587 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.28■□□□□ 0.36
POLR2E-201ENST00000215587 OSER1Q9NX31 292 aa17.28■□□□□ 0.36
POLR2E-201ENST00000215587 ZDHHC7Q9NXF8 308 aa17.28■□□□□ 0.36
POLR2E-201ENST00000215587 DDX56Q9NY93 547 aaKnown RBP17.28■□□□□ 0.36
POLR2E-201ENST00000215587 COX16Q9P0S2 106 aa17.28■□□□□ 0.36
POLR2E-201ENST00000215587 THEGQ9P2T0 379 aa17.28■□□□□ 0.36
POLR2E-201ENST00000215587 PCSK1NQ9UHG2 260 aa17.28■□□□□ 0.36
POLR2E-201ENST00000215587 ENDOD1O94919 500 aa17.27■□□□□ 0.36
POLR2E-201ENST00000215587 FGF19O95750 216 aa17.27■□□□□ 0.36
POLR2E-201ENST00000215587 TRUB2O95900 331 aaKnown RBP17.27■□□□□ 0.36
POLR2E-201ENST00000215587 KRT1P04264 644 aa17.27■□□□□ 0.36
POLR2E-201ENST00000215587 MARCKSL1P49006 195 aa17.27■□□□□ 0.36
POLR2E-201ENST00000215587 PGFP49763 221 aa17.27■□□□□ 0.36
POLR2E-201ENST00000215587 PITX1P78337 314 aaPredicted RBP17.27■□□□□ 0.36
POLR2E-201ENST00000215587 AMPD2Q01433 879 aa17.27■□□□□ 0.36
POLR2E-201ENST00000215587 SLC25A11Q02978 314 aaKnown RBP17.27■□□□□ 0.36
POLR2E-201ENST00000215587 OTUD1Q5VV17 481 aaPredicted RBP17.27■□□□□ 0.36
POLR2E-201ENST00000215587 SNX30Q5VWJ9 437 aa17.27■□□□□ 0.36
POLR2E-201ENST00000215587 TAC4Q86UU9 113 aa17.27■□□□□ 0.36
POLR2E-201ENST00000215587 ADAM32Q8TC27 787 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms