RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 PEAR1Q5VY43 1037 aaPredicted RBP16.72■□□□□ 0.27
ERCC1-201ENST00000013807 SCD5Q86SK9 330 aa16.72■□□□□ 0.27
ERCC1-201ENST00000013807 TADA2BQ86TJ2 420 aa16.72■□□□□ 0.27
ERCC1-201ENST00000013807 ZC3H3Q8IXZ2 948 aaKnown RBP16.72■□□□□ 0.27
ERCC1-201ENST00000013807 CCDC150Q8NCX0 1101 aa16.72■□□□□ 0.27
ERCC1-201ENST00000013807 FBXL13Q8NEE6 735 aa16.72■□□□□ 0.27
ERCC1-201ENST00000013807 CCDC34Q96HJ3 373 aa16.72■□□□□ 0.27
ERCC1-201ENST00000013807 XPO6Q96QU8 1125 aaKnown RBP16.72■□□□□ 0.27
ERCC1-201ENST00000013807 CDK5RAP1Q96SZ6 601 aaKnown RBP16.72■□□□□ 0.27
ERCC1-201ENST00000013807 MBD1Q9UIS9 605 aaPredicted RBP16.72■□□□□ 0.27
ERCC1-201ENST00000013807 COQ4Q9Y3A0 265 aa16.72■□□□□ 0.27
ERCC1-201ENST00000013807 A0A1W2PQF6 199 aa16.71■□□□□ 0.27
ERCC1-201ENST00000013807 A0A1W2PQH9 124 aa16.71■□□□□ 0.27
ERCC1-201ENST00000013807 CDX4O14627 284 aaPredicted RBP16.71■□□□□ 0.27
ERCC1-201ENST00000013807 STX10O60499 249 aa16.71■□□□□ 0.27
ERCC1-201ENST00000013807 TYRP14679 529 aa16.71■□□□□ 0.27
ERCC1-201ENST00000013807 HOXD12P35452 270 aa16.71■□□□□ 0.27
ERCC1-201ENST00000013807 RAB41Q5JT25 222 aa16.71■□□□□ 0.27
ERCC1-201ENST00000013807 C10orf76Q5T2E6 689 aa16.71■□□□□ 0.27
ERCC1-201ENST00000013807 ARHGAP17Q68EM7 881 aa16.71■□□□□ 0.27
ERCC1-201ENST00000013807 LPCAT2Q7L5N7 544 aa16.71■□□□□ 0.27
ERCC1-201ENST00000013807 CYP2U1Q7Z449 544 aa16.71■□□□□ 0.27
ERCC1-201ENST00000013807 SPATA20Q8TB22 786 aa16.71■□□□□ 0.27
ERCC1-201ENST00000013807 SEMA4DQ92854 862 aa16.71■□□□□ 0.27
ERCC1-201ENST00000013807 SPACA7Q96KW9 195 aa16.71■□□□□ 0.27
ERCC1-201ENST00000013807 GABRG3Q99928 467 aa16.71■□□□□ 0.27
ERCC1-201ENST00000013807 EDEM2Q9BV94 578 aa16.71■□□□□ 0.27
ERCC1-201ENST00000013807 BBS2Q9BXC9 721 aa16.71■□□□□ 0.27
ERCC1-201ENST00000013807 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.71■□□□□ 0.272e-7■■■■■ 86.5
ERCC1-201ENST00000013807 RAB20Q9NX57 234 aa16.71■□□□□ 0.27
ERCC1-201ENST00000013807 LSM7Q9UK45 103 aaKnown RBP16.71■□□□□ 0.27
ERCC1-201ENST00000013807 ZNF510Q9Y2H8 683 aa16.71■□□□□ 0.27
ERCC1-201ENST00000013807 GFRA2O00451 464 aa16.7■□□□□ 0.26
ERCC1-201ENST00000013807 TRIM24O15164 1050 aa16.7■□□□□ 0.26
ERCC1-201ENST00000013807 CETN3O15182 167 aa16.7■□□□□ 0.26
ERCC1-201ENST00000013807 STC2O76061 302 aa16.7■□□□□ 0.26
ERCC1-201ENST00000013807 IRF1P10914 325 aa16.7■□□□□ 0.26
ERCC1-201ENST00000013807 GABRG2P18507 467 aa16.7■□□□□ 0.26
ERCC1-201ENST00000013807 CD58P19256 250 aa16.7■□□□□ 0.26
ERCC1-201ENST00000013807 RAD23BP54727 409 aa16.7■□□□□ 0.26
ERCC1-201ENST00000013807 COG7P83436 770 aa16.7■□□□□ 0.26
ERCC1-201ENST00000013807 GRAMD4Q6IC98 578 aa16.7■□□□□ 0.26
ERCC1-201ENST00000013807 MIB1Q86YT6 1006 aa16.7■□□□□ 0.26
ERCC1-201ENST00000013807 SYT12Q8IV01 421 aa16.7■□□□□ 0.26
ERCC1-201ENST00000013807 FMR1NBQ8N0W7 255 aaPredicted RBP16.7■□□□□ 0.26
ERCC1-201ENST00000013807 SLC4A11Q8NBS3 891 aa16.7■□□□□ 0.26
ERCC1-201ENST00000013807 RLN3Q8WXF3 142 aa16.7■□□□□ 0.26
ERCC1-201ENST00000013807 TMEM176AQ96HP8 235 aa16.7■□□□□ 0.26
ERCC1-201ENST00000013807 GSDMAQ96QA5 445 aa16.7■□□□□ 0.26
ERCC1-201ENST00000013807 CISHQ9NSE2 258 aa16.7■□□□□ 0.26
ERCC1-201ENST00000013807 DNAJC17Q9NVM6 304 aaKnown RBP16.7■□□□□ 0.26
ERCC1-201ENST00000013807 SLC27A6Q9Y2P4 619 aa16.7■□□□□ 0.26
ERCC1-201ENST00000013807 PCDH15Q96QU1 1955 aa16.69■□□□□ 0.26
ERCC1-201ENST00000013807 TCRBV21S2A2A0A5A6 115 aa16.69■□□□□ 0.26
ERCC1-201ENST00000013807 C4orf47A7E2U8 309 aa16.69■□□□□ 0.26
ERCC1-201ENST00000013807 PRRT4C9JH25 899 aa16.69■□□□□ 0.26
ERCC1-201ENST00000013807 NEDD8-MDP1E9PL57 170 aa16.69■□□□□ 0.26
ERCC1-201ENST00000013807 PENKP01210 267 aaPredicted RBP16.69■□□□□ 0.26
ERCC1-201ENST00000013807 KLKB1P03952 638 aa16.69■□□□□ 0.26
ERCC1-201ENST00000013807 CSRP1P21291 193 aaKnown RBP16.69■□□□□ 0.26
ERCC1-201ENST00000013807 CHKAP35790 457 aa16.69■□□□□ 0.26
ERCC1-201ENST00000013807 DHPSP49366 369 aaPredicted RBP16.69■□□□□ 0.26
ERCC1-201ENST00000013807 MXI1P50539 228 aa16.69■□□□□ 0.26
ERCC1-201ENST00000013807 IRX4P78413 519 aa16.69■□□□□ 0.26
ERCC1-201ENST00000013807 C10orf120Q5SQS8 335 aa16.69■□□□□ 0.26
ERCC1-201ENST00000013807 DAB2IPQ5VWQ8 1189 aa16.69■□□□□ 0.26
ERCC1-201ENST00000013807 PM20D1Q6GTS8 502 aa16.69■□□□□ 0.26
ERCC1-201ENST00000013807 SLC23A3Q6PIS1 610 aa16.69■□□□□ 0.26
ERCC1-201ENST00000013807 FRMD1Q8N878 549 aa16.69■□□□□ 0.26
ERCC1-201ENST00000013807 ANKRD52Q8NB46 1076 aa16.69■□□□□ 0.26
ERCC1-201ENST00000013807 HMGB4Q8WW32 186 aa16.69■□□□□ 0.26
ERCC1-201ENST00000013807 HEXIM2Q96MH2 286 aaKnown RBP16.69■□□□□ 0.26
ERCC1-201ENST00000013807 GTPBP4Q9BZE4 634 aaKnown RBP16.69■□□□□ 0.26
ERCC1-201ENST00000013807 ZDHHC4Q9NPG8 344 aa16.69■□□□□ 0.26
ERCC1-201ENST00000013807 TMEM9BQ9NQ34 198 aa16.69■□□□□ 0.26
ERCC1-201ENST00000013807 RMND1Q9NWS8 449 aa16.69■□□□□ 0.26
ERCC1-201ENST00000013807 NAGPAQ9UK23 515 aa16.69■□□□□ 0.26
ERCC1-201ENST00000013807 PILRBQ9UKJ0 227 aa16.69■□□□□ 0.26
ERCC1-201ENST00000013807 ANGPTL2Q9UKU9 493 aa16.69■□□□□ 0.26
ERCC1-201ENST00000013807 CHD6Q8TD26 2715 aa16.69■□□□□ 0.26
ERCC1-201ENST00000013807 SLC16A3O15427 465 aaKnown RBP16.68■□□□□ 0.26
ERCC1-201ENST00000013807 EPB41P11171 864 aaKnown RBP16.68■□□□□ 0.26
ERCC1-201ENST00000013807 RALAP11233 206 aa16.68■□□□□ 0.26
ERCC1-201ENST00000013807 HOXB2P14652 356 aa16.68■□□□□ 0.26
ERCC1-201ENST00000013807 PRCPP42785 496 aa16.68■□□□□ 0.26
ERCC1-201ENST00000013807 PTGER3P43115 390 aa16.68■□□□□ 0.26
ERCC1-201ENST00000013807 DGKGP49619 791 aa16.68■□□□□ 0.26
ERCC1-201ENST00000013807 ZNF132P52740 706 aa16.68■□□□□ 0.26
ERCC1-201ENST00000013807 FKBP3Q00688 224 aaKnown RBP16.68■□□□□ 0.26
ERCC1-201ENST00000013807 LMAN2Q12907 356 aa16.68■□□□□ 0.26
ERCC1-201ENST00000013807 ENPP2Q13822 863 aa16.68■□□□□ 0.26
ERCC1-201ENST00000013807 ZNF658Q5TYW1 1059 aaPredicted RBP16.68■□□□□ 0.26
ERCC1-201ENST00000013807 EGFLAMQ63HQ2 1017 aa16.68■□□□□ 0.26
ERCC1-201ENST00000013807 SLC36A4Q6YBV0 504 aa16.68■□□□□ 0.26
ERCC1-201ENST00000013807 TPGS1Q6ZTW0 290 aa16.68■□□□□ 0.26
ERCC1-201ENST00000013807 FAM217AQ8IXS0 508 aa16.68■□□□□ 0.26
ERCC1-201ENST00000013807 ARHGAP18Q8N392 663 aa16.68■□□□□ 0.26
ERCC1-201ENST00000013807 ENGASEQ8NFI3 743 aa16.68■□□□□ 0.26
ERCC1-201ENST00000013807 PIGKQ92643 395 aa16.68■□□□□ 0.26
ERCC1-201ENST00000013807 P2RY11Q96G91 374 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms