RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 CSH2P0DML3 217 aa10.9□□□□□ -0.66
CX3CL1-201ENST00000006053 RBL1P28749 1068 aa10.9□□□□□ -0.66
CX3CL1-201ENST00000006053 CDC16Q13042 620 aa10.9□□□□□ -0.66
CX3CL1-201ENST00000006053 MYBPC3Q14896 1274 aa10.9□□□□□ -0.66
CX3CL1-201ENST00000006053 NOMO1Q15155 1222 aa10.9□□□□□ -0.66
CX3CL1-201ENST00000006053 C15orf59Q2T9L4 293 aaPredicted RBP10.9□□□□□ -0.66
CX3CL1-201ENST00000006053 ANGEL2Q5VTE6 544 aaKnown RBP10.9□□□□□ -0.66
CX3CL1-201ENST00000006053 C16orf46Q6P387 395 aa10.9□□□□□ -0.66
CX3CL1-201ENST00000006053 CMASQ8NFW8 434 aaPredicted RBP10.9□□□□□ -0.66
CX3CL1-201ENST00000006053 CCDC124Q96CT7 223 aaKnown RBP10.9□□□□□ -0.66
CX3CL1-201ENST00000006053 MMP19Q99542 508 aa10.9□□□□□ -0.66
CX3CL1-201ENST00000006053 PLA2G4CQ9UP65 541 aa10.9□□□□□ -0.66
CX3CL1-201ENST00000006053 hCG_2014768A0A024R1R8 64 aa10.9□□□□□ -0.66
CX3CL1-201ENST00000006053 F5H423 210 aaPredicted RBP10.9□□□□□ -0.66
CX3CL1-201ENST00000006053 LYPLA1O75608 230 aaPredicted RBP10.9□□□□□ -0.66
CX3CL1-201ENST00000006053 RFPL1O75677 317 aa10.9□□□□□ -0.66
CX3CL1-201ENST00000006053 KRT38O76015 456 aa10.9□□□□□ -0.66
CX3CL1-201ENST00000006053 ZBED1O96006 694 aa10.9□□□□□ -0.66
CX3CL1-201ENST00000006053 ASPAP45381 313 aa10.9□□□□□ -0.66
CX3CL1-201ENST00000006053 TRMT10BQ6PF06 316 aaKnown RBP10.9□□□□□ -0.66
CX3CL1-201ENST00000006053 RAPH1Q70E73 1250 aa10.9□□□□□ -0.66
CX3CL1-201ENST00000006053 FAM83AQ86UY5 434 aa10.9□□□□□ -0.66
CX3CL1-201ENST00000006053 TTLL6Q8N841 843 aa10.9□□□□□ -0.66
CX3CL1-201ENST00000006053 UBA3Q8TBC4 463 aa10.9□□□□□ -0.66
CX3CL1-201ENST00000006053 USP6NLQ92738 828 aa10.9□□□□□ -0.66
CX3CL1-201ENST00000006053 CDHR1Q96JP9 859 aa10.9□□□□□ -0.66
CX3CL1-201ENST00000006053 GMLQ99445 158 aa10.9□□□□□ -0.66
CX3CL1-201ENST00000006053 CYP4F11Q9HBI6 524 aa10.9□□□□□ -0.66
CX3CL1-201ENST00000006053 GALNT8Q9NY28 637 aa10.9□□□□□ -0.66
CX3CL1-201ENST00000006053 PAK5Q9P286 719 aa10.9□□□□□ -0.66
CX3CL1-201ENST00000006053 HBS1LQ9Y450 684 aaKnown RBP10.9□□□□□ -0.66
CX3CL1-201ENST00000006053 M0QYV0 167 aa10.89□□□□□ -0.67
CX3CL1-201ENST00000006053 WNT10BO00744 389 aa10.89□□□□□ -0.67
CX3CL1-201ENST00000006053 CHADO15335 359 aa10.89□□□□□ -0.67
CX3CL1-201ENST00000006053 MED7O43513 233 aa10.89□□□□□ -0.67
CX3CL1-201ENST00000006053 ADCY3O60266 1144 aa10.89□□□□□ -0.67
CX3CL1-201ENST00000006053 ATG7O95352 703 aa10.89□□□□□ -0.67
CX3CL1-201ENST00000006053 GSTT1P30711 240 aa10.89□□□□□ -0.67
CX3CL1-201ENST00000006053 AP3M2P53677 418 aa10.89□□□□□ -0.67
CX3CL1-201ENST00000006053 TAZQ16635 292 aa10.89□□□□□ -0.67
CX3CL1-201ENST00000006053 GSTA3Q16772 222 aa10.89□□□□□ -0.67
CX3CL1-201ENST00000006053 PRAMEF18Q5VWM3 479 aa10.89□□□□□ -0.67
CX3CL1-201ENST00000006053 RASSF3Q86WH2 238 aa10.89□□□□□ -0.67
CX3CL1-201ENST00000006053 SLC26A7Q8TE54 656 aa10.89□□□□□ -0.67
CX3CL1-201ENST00000006053 PRPF31Q8WWY3 499 aaKnown RBP10.89□□□□□ -0.67
CX3CL1-201ENST00000006053 NR1H4Q96RI1 486 aaPredicted RBP10.89□□□□□ -0.67
CX3CL1-201ENST00000006053 CCDC106Q9BWC9 280 aa10.89□□□□□ -0.67
CX3CL1-201ENST00000006053 EBF3Q9H4W6 596 aa10.89□□□□□ -0.67
CX3CL1-201ENST00000006053 POPDC2Q9HBU9 364 aa10.89□□□□□ -0.67
CX3CL1-201ENST00000006053 PREBQ9HCU5 417 aa10.89□□□□□ -0.67
CX3CL1-201ENST00000006053 ASNSD1Q9NWL6 643 aa10.89□□□□□ -0.67
CX3CL1-201ENST00000006053 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.89□□□□□ -0.67
CX3CL1-201ENST00000006053 OPHN1O60890 802 aa10.89□□□□□ -0.67
CX3CL1-201ENST00000006053 PDE5AO76074 875 aa10.89□□□□□ -0.67
CX3CL1-201ENST00000006053 IL1BP01584 269 aa10.89□□□□□ -0.67
CX3CL1-201ENST00000006053 TNNC2P02585 160 aa10.89□□□□□ -0.67
CX3CL1-201ENST00000006053 HIC1Q14526 733 aa10.89□□□□□ -0.67
CX3CL1-201ENST00000006053 FAM91A1Q658Y4 838 aa10.89□□□□□ -0.67
CX3CL1-201ENST00000006053 OR6B2Q6IFH4 312 aa10.89□□□□□ -0.67
CX3CL1-201ENST00000006053 EFCAB3Q8N7B9 438 aa10.89□□□□□ -0.67
CX3CL1-201ENST00000006053 FNIP1Q8TF40 1166 aa10.89□□□□□ -0.67
CX3CL1-201ENST00000006053 ZFAND2BQ8WV99 257 aa10.89□□□□□ -0.67
CX3CL1-201ENST00000006053 TSPAN18Q96SJ8 248 aa10.89□□□□□ -0.67
CX3CL1-201ENST00000006053 MRPL4Q9BYD3 311 aaKnown RBP10.89□□□□□ -0.67
CX3CL1-201ENST00000006053 SIRPGQ9P1W8 387 aa10.89□□□□□ -0.67
CX3CL1-201ENST00000006053 HMGXB4Q9UGU5 601 aa10.89□□□□□ -0.67
CX3CL1-201ENST00000006053 PRPSAP2O60256 369 aa10.89□□□□□ -0.67
CX3CL1-201ENST00000006053 APOEP02649 317 aa10.89□□□□□ -0.67
CX3CL1-201ENST00000006053 PDGFRAP16234 1089 aa10.89□□□□□ -0.67
CX3CL1-201ENST00000006053 RPL10AP62906 217 aaKnown RBP10.89□□□□□ -0.67
CX3CL1-201ENST00000006053 PDE1BQ01064 536 aa10.89□□□□□ -0.67
CX3CL1-201ENST00000006053 ASPHQ12797 758 aa10.89□□□□□ -0.67
CX3CL1-201ENST00000006053 TFDP2Q14188 446 aa10.89□□□□□ -0.67
CX3CL1-201ENST00000006053 TEX44Q53QW1 395 aa10.89□□□□□ -0.67
CX3CL1-201ENST00000006053 RALGPS1Q5JS13 557 aa10.89□□□□□ -0.67
CX3CL1-201ENST00000006053 UNC5AQ6ZN44 842 aa10.89□□□□□ -0.67
CX3CL1-201ENST00000006053 RSPH3Q86UC2 560 aa10.89□□□□□ -0.67
CX3CL1-201ENST00000006053 CAND1Q86VP6 1230 aaKnown RBP10.89□□□□□ -0.67
CX3CL1-201ENST00000006053 STKLD1Q8NE28 680 aa10.89□□□□□ -0.67
CX3CL1-201ENST00000006053 TWNKQ96RR1 684 aa10.89□□□□□ -0.67
CX3CL1-201ENST00000006053 CAMKK2Q96RR4 588 aa10.89□□□□□ -0.67
CX3CL1-201ENST00000006053 KLC2Q9H0B6 622 aa10.89□□□□□ -0.67
CX3CL1-201ENST00000006053 XAB2Q9HCS7 855 aaKnown RBP10.89□□□□□ -0.67
CX3CL1-201ENST00000006053 SOX13Q9UN79 622 aa10.89□□□□□ -0.67
CX3CL1-201ENST00000006053 DNAJC16Q9Y2G8 782 aa10.89□□□□□ -0.67
CX3CL1-201ENST00000006053 SPATA31C2B4DYI2 1134 aa10.88□□□□□ -0.67
CX3CL1-201ENST00000006053 TXNDC9O14530 226 aa10.88□□□□□ -0.67
CX3CL1-201ENST00000006053 OGTO15294 1046 aa10.88□□□□□ -0.67
CX3CL1-201ENST00000006053 PFDN1O60925 122 aa10.88□□□□□ -0.67
CX3CL1-201ENST00000006053 RNASEH1O60930 286 aaKnown RBP10.88□□□□□ -0.67
CX3CL1-201ENST00000006053 SORBS2O94875 1100 aaKnown RBP10.88□□□□□ -0.67
CX3CL1-201ENST00000006053 C1QAP02745 245 aa10.88□□□□□ -0.67
CX3CL1-201ENST00000006053 HMGCRP04035 888 aa10.88□□□□□ -0.67
CX3CL1-201ENST00000006053 BPGMP07738 259 aa10.88□□□□□ -0.67
CX3CL1-201ENST00000006053 ETS2P15036 469 aa10.88□□□□□ -0.67
CX3CL1-201ENST00000006053 BCAR1P56945 870 aa10.88□□□□□ -0.67
CX3CL1-201ENST00000006053 FSTL1Q12841 308 aa10.88□□□□□ -0.67
CX3CL1-201ENST00000006053 ZNF667Q5HYK9 610 aa10.88□□□□□ -0.67
CX3CL1-201ENST00000006053 LPCAT4Q643R3 524 aa10.88□□□□□ -0.67
CX3CL1-201ENST00000006053 DENND5BQ6ZUT9 1274 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms