RNA–Protein interactions for RNA: ENSMUST00000132214.7

Ccdc38-203, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc38, Length 2,222 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-203ENSMUST00000132214 PcnaP17918 261 aa6.72□□□□□ -1.33
Ccdc38-203ENSMUST00000132214 Slc2a3P32037 493 aaKnown RBP6.72□□□□□ -1.33
Ccdc38-203ENSMUST00000132214 FynP39688 537 aa6.72□□□□□ -1.33
Ccdc38-203ENSMUST00000132214 Rpl5P47962 297 aaKnown RBP6.72□□□□□ -1.33
Ccdc38-203ENSMUST00000132214 Pcyt1aP49586 367 aa6.72□□□□□ -1.33
Ccdc38-203ENSMUST00000132214 Rad23aP54726 363 aa6.72□□□□□ -1.33
Ccdc38-203ENSMUST00000132214 Cyp2c39P56656 490 aa6.72□□□□□ -1.33
Ccdc38-203ENSMUST00000132214 St14P56677 855 aa6.72□□□□□ -1.33
Ccdc38-203ENSMUST00000132214 Exosc10P56960 887 aaKnown RBP6.72□□□□□ -1.33
Ccdc38-203ENSMUST00000132214 Serping1P97290 504 aa6.72□□□□□ -1.33
Ccdc38-203ENSMUST00000132214 Kcna7Q17ST2 489 aa6.72□□□□□ -1.33
Ccdc38-203ENSMUST00000132214 Gbp8Q2V6D6 525 aa6.72□□□□□ -1.33
Ccdc38-203ENSMUST00000132214 Nr1d1Q3UV55 615 aa6.72□□□□□ -1.33
Ccdc38-203ENSMUST00000132214 Serpina3gQ5I2A0 440 aa6.72□□□□□ -1.33
Ccdc38-203ENSMUST00000132214 Gm5169Q5M8P2 212 aa6.72□□□□□ -1.33
Ccdc38-203ENSMUST00000132214 Foxn1Q61575 648 aa6.72□□□□□ -1.33
Ccdc38-203ENSMUST00000132214 Slc6a15Q8BG16 729 aa6.72□□□□□ -1.33
Ccdc38-203ENSMUST00000132214 Bpifb6Q8BU51 449 aa6.72□□□□□ -1.33
Ccdc38-203ENSMUST00000132214 Slc39a11Q8BWY7 342 aa6.72□□□□□ -1.33
Ccdc38-203ENSMUST00000132214 Efl1Q8C0D5 1127 aa6.72□□□□□ -1.33
Ccdc38-203ENSMUST00000132214 Actl9Q8CG27 415 aa6.72□□□□□ -1.33
Ccdc38-203ENSMUST00000132214 Lsm14bQ8CGC4 385 aaKnown RBP6.72□□□□□ -1.33
Ccdc38-203ENSMUST00000132214 Mtrf1Q8K126 446 aa6.72□□□□□ -1.33
Ccdc38-203ENSMUST00000132214 Mtss1Q8R1S4 759 aa6.72□□□□□ -1.33
Ccdc38-203ENSMUST00000132214 Mterf3Q8R3J4 412 aa6.72□□□□□ -1.33
Ccdc38-203ENSMUST00000132214 Cnot6lQ8VEG6 555 aa6.72□□□□□ -1.33
Ccdc38-203ENSMUST00000132214 Mogat1Q91ZV4 335 aa6.72□□□□□ -1.33
Ccdc38-203ENSMUST00000132214 Dppa5aQ9CQS7 118 aa6.72□□□□□ -1.33
Ccdc38-203ENSMUST00000132214 MthfsQ9D110 203 aa6.72□□□□□ -1.33
Ccdc38-203ENSMUST00000132214 Tomm20lQ9D4V6 152 aa6.72□□□□□ -1.33
Ccdc38-203ENSMUST00000132214 Natd1Q9DBW3 110 aa6.72□□□□□ -1.33
Ccdc38-203ENSMUST00000132214 Emc7Q9EP72 241 aa6.72□□□□□ -1.33
Ccdc38-203ENSMUST00000132214 Ccnl2Q9JJA7 518 aa6.72□□□□□ -1.33
Ccdc38-203ENSMUST00000132214 Acsl4Q9QUJ7 711 aa6.72□□□□□ -1.33
Ccdc38-203ENSMUST00000132214 Nlrp5Q9R1M5 1163 aa6.72□□□□□ -1.33
Ccdc38-203ENSMUST00000132214 Mtm1Q9Z2C5 603 aa6.72□□□□□ -1.33
Ccdc38-203ENSMUST00000132214 Mroh6V9GX81 722 aa6.72□□□□□ -1.33
Ccdc38-203ENSMUST00000132214 Myh4Q5SX39 1939 aa6.71□□□□□ -1.33
Ccdc38-203ENSMUST00000132214 Nup98Q6PFD9 1816 aaKnown RBP6.71□□□□□ -1.33
Ccdc38-203ENSMUST00000132214 Lrrc72A0A1Y7VMI0 288 aa6.71□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 Pcdhb9E9Q5G2 828 aa6.71□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 Zbtb11G5E8B9 1050 aaKnown RBP6.71□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 Casp1P29452 402 aa6.71□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 Gsta3P30115 221 aa6.71□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 Mmp12P34960 473 aa6.71□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 Crnkl1P63154 690 aaKnown RBP6.71□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 Cyp2e1Q05421 493 aa6.71□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 Macrod2Q3UYG8 475 aa6.71□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 Tdrd5Q5VCS6 1040 aa6.71□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 Tsg101Q61187 391 aa6.71□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 Ubxn7Q6P5G6 467 aa6.71□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 Kcnk18Q6VV64 394 aa6.71□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 Znf507Q6ZPY5 941 aa6.71□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 Ccdc25Q78PG9 208 aa6.71□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 Sez6Q7TSK2 991 aa6.71□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 Tyw3Q8BSA9 257 aa6.71□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 Aifm2Q8BUE4 373 aa6.71□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 Ccdc169Q8BXX9 214 aa6.71□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 Fsd1lQ8BYN5 507 aa6.71□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 SynpoQ8CC35 929 aaKnown RBP6.71□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 Tbc1d14Q8CGA2 694 aa6.71□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 Mmgt1Q8K273 131 aaKnown RBP6.71□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 Plcd1Q8R3B1 756 aa6.71□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 L2hgdhQ91YP0 464 aa6.71□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 Hdac9Q99N13 588 aa6.71□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 CoprsQ9CQ13 173 aa6.71□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 Fam133bQ9CVI2 245 aaKnown RBP6.71□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 NvlQ9DBY8 855 aaKnown RBP6.71□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 Aldh6a1Q9EQ20 535 aaKnown RBP6.71□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 Ror2Q9Z138 944 aa6.71□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 Krtap28-10A0A1Y7VP58 119 aa6.7□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 Vsig10lD3YZF7 868 aa6.7□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 8030474K03RikE9Q4Y8 554 aa6.7□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 ApoeP08226 311 aa6.7□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 PolP11369 1281 aa6.7□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 TstP52196 297 aaKnown RBP6.7□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 Faf1P54731 649 aa6.7□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 Chrna5Q2MKA5 467 aa6.7□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 Slc39a7Q31125 476 aa6.7□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 TraddQ3U0V2 310 aa6.7□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 Hdgfl2Q3UMU9 669 aa6.7□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 Proser1Q5PRE5 913 aa6.7□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 Ccdc157Q5SPX1 718 aa6.7□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 MycbpapQ5SUV2 932 aa6.7□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 Il17raQ60943 864 aa6.7□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 Rhpn1Q61085 643 aa6.7□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 Jade3Q6IE82 823 aa6.7□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 Arhgap10Q6Y5D8 786 aa6.7□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 Ctdp1Q7TSG2 960 aa6.7□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 Klhl29Q80T74 875 aa6.7□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 Ehd2Q8BH64 543 aa6.7□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 Ano1Q8BHY3 960 aa6.7□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 Hook1Q8BIL5 728 aa6.7□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 Olfm2Q8BM13 448 aa6.7□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 Rab44Q8CB87 725 aa6.7□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 Gbp5Q8CFB4 590 aa6.7□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 Tbc1d23Q8K0F1 684 aa6.7□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 Asb2Q8K0L0 634 aa6.7□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 Abcf3Q8K268 709 aa6.7□□□□□ -1.34
Ccdc38-203ENSMUST00000132214 Scara5Q8K299 491 aa6.7□□□□□ -1.34
Retrieved 100 of 22,080 RNA–protein pairs in 43.9 ms