RNA–Protein interactions for RNA: ENSMUST00000106035.7

Ccdc28b-202, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28b, Length 821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-202ENSMUST00000106035 Pnma3Q8JZW8 466 aa12.8□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Mtrf1Q8K126 446 aa12.8□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Taf6lQ8R2K4 616 aa12.8□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Slc30a5Q8R4H9 761 aa12.8□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 BbxQ8VBW5 907 aa12.8□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Fam3cQ91VU0 227 aa12.8□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Olfr703Q9EPF5 319 aa12.8□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Rnf14Q9JI90 485 aa12.8□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Herpud2Q9JJC9 404 aa12.8□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 NbnQ9R207 751 aa12.8□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 St6galnac4Q9R2B6 360 aa12.8□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Zfp990B1AVN5 605 aa12.79□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Pgrmc1O55022 195 aa12.79□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Sypl2O89104 264 aa12.79□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 AvpP35455 168 aa12.79□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 CebpzP53569 1052 aaKnown RBP12.79□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 CtswP56203 371 aa12.79□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Cry1P97784 606 aa12.79□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Zfp217Q3U0X6 1041 aa12.79□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Ccdc185Q3V118 621 aa12.79□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Gm14851Q5ERJ0 116 aa12.79□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Ccdc57Q6PHN1 1016 aa12.79□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Mgat5bQ765H6 792 aa12.79□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Nrde2Q80XC6 1172 aa12.79□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 MmaaQ8C7H1 415 aa12.79□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Ubxn4Q8VCH8 506 aa12.79□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Usp3Q91W36 520 aaKnown RBP12.79□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Med7Q9CZB6 233 aa12.79□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Thap2Q9D305 217 aa12.79□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Slco6d1Q9D5W6 683 aa12.79□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Prl5a1Q9JII2 230 aa12.79□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Orc1Q9Z1N2 840 aaKnown RBP12.79□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 RlfA2A7F4 1918 aa12.79□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 PtprdQ64487 1912 aa12.79□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 0610012G03RikA0A0J9YTR2 95 aa12.78□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Zfp626A0A0U1RQ84 676 aa12.78□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 1700016G14RikA0A286YCZ6 238 aa12.78□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Olfr552E9Q545 317 aa12.78□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Adcy1O88444 1118 aa12.78□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 GpiP06745 558 aaKnown RBP12.78□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 PrphP15331 475 aa12.78□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 F9P16294 471 aa12.78□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Tsta3P23591 321 aa12.78□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Pik3caP42337 1068 aa12.78□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Mrps6P58064 125 aa12.78□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Bcl2a1cQ0P538 128 aa12.78□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Gpr174Q3U507 335 aa12.78□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Agxt2Q3UEG6 513 aa12.78□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Defb28Q3V2L0 89 aa12.78□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Olfr1198Q7TR12 308 aa12.78□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Olfr698Q7TRN4 311 aa12.78□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Mib1Q80SY4 1006 aa12.78□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Znf750Q8BH05 703 aa12.78□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 LarsQ8BMJ2 1178 aa12.78□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Slc9a4Q8BUE1 797 aa12.78□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Ago1Q8CJG1 857 aaKnown RBP12.78□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Cts3Q91ZD5 332 aa12.78□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Rab11fip1Q9D620 645 aa12.78□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 MesdQ9ERE7 224 aa12.78□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Rtn3Q9ES97 964 aa12.78□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Asap1Q9QWY8 1147 aa12.78□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Cpxm1Q9Z100 722 aa12.78□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Eif2ak3Q9Z2B5 1114 aa12.78□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Slfn14V9GXG1 899 aa12.78□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 R3hdmlA2A5I3 253 aa12.77□□□□□ -0.37
Ccdc28b-202ENSMUST00000106035 Vmn2r54K7N649 806 aa12.77□□□□□ -0.37
Ccdc28b-202ENSMUST00000106035 Ring1O35730 406 aa12.77□□□□□ -0.37
Ccdc28b-202ENSMUST00000106035 Coro1aO89053 461 aa12.77□□□□□ -0.37
Ccdc28b-202ENSMUST00000106035 Atxn1lP0C7T6 687 aa12.77□□□□□ -0.37
Ccdc28b-202ENSMUST00000106035 Pla2g4bP0C871 782 aa12.77□□□□□ -0.37
Ccdc28b-202ENSMUST00000106035 Itga11P61622 1188 aa12.77□□□□□ -0.37
Ccdc28b-202ENSMUST00000106035 Ermp1Q3UVK0 898 aaKnown RBP12.77□□□□□ -0.37
Ccdc28b-202ENSMUST00000106035 Gm5169Q5M8P2 212 aa12.77□□□□□ -0.37
Ccdc28b-202ENSMUST00000106035 Fam46cQ5SSF7 391 aa12.77□□□□□ -0.37
Ccdc28b-202ENSMUST00000106035 Q6PAC4 1279 aa12.77□□□□□ -0.37
Ccdc28b-202ENSMUST00000106035 Mvb12aQ78HU3 271 aa12.77□□□□□ -0.37
Ccdc28b-202ENSMUST00000106035 HhipQ7TN16 700 aa12.77□□□□□ -0.37
Ccdc28b-202ENSMUST00000106035 Trim62Q80V85 475 aa12.77□□□□□ -0.37
Ccdc28b-202ENSMUST00000106035 Q80ZQ3 298 aa12.77□□□□□ -0.37
Ccdc28b-202ENSMUST00000106035 Gm5622Q810Q0 167 aa12.77□□□□□ -0.37
Ccdc28b-202ENSMUST00000106035 Enox1Q8BHR2 643 aaKnown RBP12.77□□□□□ -0.37
Ccdc28b-202ENSMUST00000106035 Slc6a17Q8BJI1 727 aa12.77□□□□□ -0.37
Ccdc28b-202ENSMUST00000106035 Anapc5Q8BTZ4 740 aa12.77□□□□□ -0.37
Ccdc28b-202ENSMUST00000106035 Cep95Q8BVV7 827 aa12.77□□□□□ -0.37
Ccdc28b-202ENSMUST00000106035 HnrnplQ8R081 586 aaKnown RBP12.77□□□□□ -0.37
Ccdc28b-202ENSMUST00000106035 Emid1Q91VF5 444 aa12.77□□□□□ -0.37
Ccdc28b-202ENSMUST00000106035 Vps36Q91XD6 386 aa12.77□□□□□ -0.37
Ccdc28b-202ENSMUST00000106035 Twf1Q91YR1 350 aaKnown RBP12.77□□□□□ -0.37
Ccdc28b-202ENSMUST00000106035 Lztr1Q9CQ33 837 aa12.77□□□□□ -0.37
Ccdc28b-202ENSMUST00000106035 Phf6Q9D4J7 364 aa12.77□□□□□ -0.37
Ccdc28b-202ENSMUST00000106035 Ndst4Q9EQW8 872 aa12.77□□□□□ -0.37
Ccdc28b-202ENSMUST00000106035 Cyp39a1Q9JKJ9 470 aa12.77□□□□□ -0.37
Ccdc28b-202ENSMUST00000106035 Nphs1Q9QZS7 1256 aa12.77□□□□□ -0.37
Ccdc28b-202ENSMUST00000106035 Brca2P97929 3329 aa12.77□□□□□ -0.37
Ccdc28b-202ENSMUST00000106035 Gm8113E0CXS8 587 aa12.76□□□□□ -0.37
Ccdc28b-202ENSMUST00000106035 Dthd1E9PZX1 795 aa12.76□□□□□ -0.37
Ccdc28b-202ENSMUST00000106035 CkmP07310 381 aa12.76□□□□□ -0.37
Ccdc28b-202ENSMUST00000106035 Lhx5P61375 402 aa12.76□□□□□ -0.37
Ccdc28b-202ENSMUST00000106035 TankP70347 448 aa12.76□□□□□ -0.37
Ccdc28b-202ENSMUST00000106035 MybphP70402 483 aa12.76□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 26 ms