RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Fgf15O35622 218 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Tspyl1O88852 379 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Rbp3P49194 1234 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Psmc5P62196 406 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Serpina1eQ00898 413 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Fdxacb1Q3UY23 622 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 HarsQ61035 509 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Trim24Q64127 1051 aaKnown RBP8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Nyap1Q6PFX7 833 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Cacna2d2Q6PHS9 1154 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 HpseQ6YGZ1 535 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Tdpoz2Q717B2 364 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Trpm4Q7TN37 1213 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Vat1lQ80TB8 417 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Atg16l1Q8C0J2 607 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Taf2Q8C176 1104 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Afg3l2Q8JZQ2 802 aaKnown RBP8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Clvs1Q9D4C9 354 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Tmx2Q9D710 295 aaKnown RBP8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Tor1aQ9ER39 333 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Rdh14Q9ERI6 334 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Angptl2Q9R045 493 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Prmt2Q9R144 448 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Capn7Q9R1S8 813 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Lamb2Q61292 1799 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Plxnb2B2RXS4 1842 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Acnat1A2AKK5 416 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 1700011I03RikE9PYL8 271 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Ifnar2O35664 513 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 UgcgO88693 394 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Cyp4a10O88833 509 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 AfmO89020 608 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Nr3c1P06537 783 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Tcea1P10711 301 aaKnown RBP8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Ifrd1P19182 449 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Nos2P29477 1144 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Tfap2aP34056 437 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 TxkP42682 527 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 SftpbP50405 377 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Rpl22P67984 128 aaKnown RBP8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Mark2Q05512 776 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Fam172aQ3TNH5 417 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Lrrn4clQ3TYX2 239 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Ubn1Q4G0F8 1135 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Nab1Q61122 486 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Pcsk7Q61139 770 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Bcap31Q61335 245 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Ifit3Q64345 403 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Tbc1d22bQ80VE5 505 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Nipa1Q8BHK1 323 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 EtnpplQ8BWU8 499 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Thop1Q8C1A5 687 aaKnown RBP8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Cfap61Q8CEL2 1252 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Kdm4bQ91VY5 1086 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 BrdtQ91Y44 956 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Dctn2Q99KJ8 402 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Ddx28Q9CWT6 540 aaKnown RBP8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Wars2Q9CYK1 360 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Bcs1lQ9CZP5 418 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Nt5c3aQ9D020 331 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Plpp6Q9D4F2 292 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Natd1Q9DBW3 110 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Xpo7Q9EPK7 1087 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Cntnap5cQ0V8T7 1305 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Plekhg4A0A1L1SU27 1217 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Kpna7C0LLJ0 499 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Zfp457L7N1X4 647 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Gm3424L7N298 263 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Gm8246M0QWX9 263 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 KitP05532 979 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 YwhagP61982 247 aaKnown RBP8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Ikzf1Q03267 517 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Pou6f1Q07916 301 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Eif2dQ61211 570 aaKnown RBP8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Zpbp2Q6X786 326 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Deup1Q7M6Y5 601 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 NfascQ810U3 1240 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Tcaf1Q8BNE1 924 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Pnma1Q8C1C8 353 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Mgat5Q8R4G6 740 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Yipf5Q9EQQ2 257 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Dkc1Q9ESX5 509 aaKnown RBP8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 FibpQ9JI19 357 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 B4galt4Q9JJ04 344 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Tgm1Q9JLF6 815 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Cntnap4Q99P47 1310 aa8.54□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Gm36028A0A0U1RPM1 299 aa8.54□□□□□ -1.04
Cdc40-201ENSMUST00000044166 TroapB7ZNG4 668 aa8.54□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Gm8257E9Q8R3 264 aa8.54□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Itm2bO89051 266 aa8.54□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Camk4P08414 469 aa8.54□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Sult2a1P52843 285 aa8.54□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Q3TQQ9 903 aa8.54□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Abi3bpQ59IW6 1179 aa8.54□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Gata6Q61169 589 aa8.54□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Ino80dQ66JY2 873 aaKnown RBP8.54□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Vmn2r43Q80Z08 845 aa8.54□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Svs3bQ8BZH8 265 aa8.54□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Stoml1Q8CI66 399 aa8.54□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Dppa3Q8QZY3 150 aa8.54□□□□□ -1.04
Retrieved 100 of 22,080 RNA–protein pairs in 26.4 ms