RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Tbx20Q9ES03 445 aa15.51■□□□□ 0.07
Nup54-201ENSMUST00000038514 GghQ9Z0L8 317 aa15.51■□□□□ 0.07
Nup54-201ENSMUST00000038514 Nup210lQ9D2F7 1881 aa15.51■□□□□ 0.07
Nup54-201ENSMUST00000038514 Sh3pxd2bA2AAY5 908 aa15.51■□□□□ 0.07
Nup54-201ENSMUST00000038514 4931406B18RikA2RSL7 367 aa15.51■□□□□ 0.07
Nup54-201ENSMUST00000038514 Msx3P70354 204 aa15.51■□□□□ 0.07
Nup54-201ENSMUST00000038514 PrkcqQ02111 707 aa15.51■□□□□ 0.07
Nup54-201ENSMUST00000038514 Aldh1a2Q62148 518 aa15.51■□□□□ 0.07
Nup54-201ENSMUST00000038514 Ddr2Q62371 854 aa15.51■□□□□ 0.07
Nup54-201ENSMUST00000038514 Q8R1Y2 203 aa15.51■□□□□ 0.07
Nup54-201ENSMUST00000038514 Fbxo33Q8VE08 562 aa15.51■□□□□ 0.07
Nup54-201ENSMUST00000038514 Ap2b1Q9DBG3 937 aa15.51■□□□□ 0.07
Nup54-201ENSMUST00000038514 PllpQ9DCU2 182 aa15.51■□□□□ 0.07
Nup54-201ENSMUST00000038514 Ndufa13Q9ERS2 144 aa15.51■□□□□ 0.07
Nup54-201ENSMUST00000038514 Fut2Q9JL27 347 aa15.51■□□□□ 0.07
Nup54-201ENSMUST00000038514 Krt16Q9Z2K1 469 aa15.51■□□□□ 0.07
Nup54-201ENSMUST00000038514 Abcb5B5X0E4 1255 aa15.5■□□□□ 0.07
Nup54-201ENSMUST00000038514 Plekha5E9Q6H8 1269 aa15.5■□□□□ 0.07
Nup54-201ENSMUST00000038514 Olfm1O88998 485 aa15.5■□□□□ 0.07
Nup54-201ENSMUST00000038514 Pex2P55098 305 aa15.5■□□□□ 0.07
Nup54-201ENSMUST00000038514 G3bp2P97379 482 aaKnown RBP15.5■□□□□ 0.07
Nup54-201ENSMUST00000038514 4930430A15RikQ05AC5 485 aa15.5■□□□□ 0.07
Nup54-201ENSMUST00000038514 Pdss1Q33DR2 409 aa15.5■□□□□ 0.07
Nup54-201ENSMUST00000038514 Slc26a2Q62273 739 aa15.5■□□□□ 0.07
Nup54-201ENSMUST00000038514 Zfp759Q7M6X3 721 aa15.5■□□□□ 0.07
Nup54-201ENSMUST00000038514 Lrrc27Q80YS5 523 aa15.5■□□□□ 0.07
Nup54-201ENSMUST00000038514 Gbp9Q8BTS3 619 aa15.5■□□□□ 0.07
Nup54-201ENSMUST00000038514 Tp53inp2Q8CFU8 221 aa15.5■□□□□ 0.07
Nup54-201ENSMUST00000038514 Wdr98Q8VC42 657 aa15.5■□□□□ 0.07
Nup54-201ENSMUST00000038514 Ascc2Q91WR3 749 aa15.5■□□□□ 0.07
Nup54-201ENSMUST00000038514 ChiaQ91XA9 473 aa15.5■□□□□ 0.07
Nup54-201ENSMUST00000038514 Tmod2Q9JKK7 351 aa15.5■□□□□ 0.07
Nup54-201ENSMUST00000038514 Rtl9Q32KG4 1339 aa15.5■□□□□ 0.07
Nup54-201ENSMUST00000038514 Ccdc175E9PVB3 822 aa15.5■□□□□ 0.07
Nup54-201ENSMUST00000038514 Abhd12bG3UZN6 359 aa15.5■□□□□ 0.07
Nup54-201ENSMUST00000038514 Axin1O35625 863 aa15.5■□□□□ 0.07
Nup54-201ENSMUST00000038514 Fam198aQ3UY90 562 aa15.5■□□□□ 0.07
Nup54-201ENSMUST00000038514 Foxn1Q61575 648 aa15.5■□□□□ 0.07
Nup54-201ENSMUST00000038514 Rpf1Q7TND5 349 aaKnown RBP15.5■□□□□ 0.07
Nup54-201ENSMUST00000038514 Zbtb5Q7TQG0 670 aa15.5■□□□□ 0.07
Nup54-201ENSMUST00000038514 Clec4gQ8BNX1 294 aa15.5■□□□□ 0.07
Nup54-201ENSMUST00000038514 Pcdhb6Q91XZ4 772 aa15.5■□□□□ 0.07
Nup54-201ENSMUST00000038514 Fgd4Q91ZT5 766 aa15.5■□□□□ 0.07
Nup54-201ENSMUST00000038514 Vta1Q9CR26 309 aa15.5■□□□□ 0.07
Nup54-201ENSMUST00000038514 Olfr271-ps1A0A1L1SQH2 283 aa15.49■□□□□ 0.07
Nup54-201ENSMUST00000038514 Olfr611K7N609 323 aa15.49■□□□□ 0.07
Nup54-201ENSMUST00000038514 Olfr612L7N462 323 aa15.49■□□□□ 0.07
Nup54-201ENSMUST00000038514 Cbfa2t2O70374 594 aa15.49■□□□□ 0.07
Nup54-201ENSMUST00000038514 Cyth2P63034 400 aaKnown RBP15.49■□□□□ 0.07
Nup54-201ENSMUST00000038514 Hsdl2Q2TPA8 490 aaKnown RBP15.49■□□□□ 0.07
Nup54-201ENSMUST00000038514 Nlrc4Q3UP24 1024 aa15.49■□□□□ 0.07
Nup54-201ENSMUST00000038514 Gemin4Q6P6L6 1058 aaKnown RBP15.49■□□□□ 0.07
Nup54-201ENSMUST00000038514 Tbx10Q810F8 385 aa15.49■□□□□ 0.07
Nup54-201ENSMUST00000038514 Slc35f5Q8R314 524 aa15.49■□□□□ 0.07
Nup54-201ENSMUST00000038514 Gstm4Q8R5I6 218 aa15.49■□□□□ 0.07
Nup54-201ENSMUST00000038514 Upb1Q8VC97 393 aa15.49■□□□□ 0.07
Nup54-201ENSMUST00000038514 Ttc8Q8VD72 515 aa15.49■□□□□ 0.07
Nup54-201ENSMUST00000038514 Ophn1Q99J31 802 aa15.49■□□□□ 0.07
Nup54-201ENSMUST00000038514 Ogfod2Q9CQ04 349 aa15.49■□□□□ 0.07
Nup54-201ENSMUST00000038514 Thg1lQ9CY52 298 aa15.49■□□□□ 0.07
Nup54-201ENSMUST00000038514 Cldn22Q9D7U6 220 aa15.49■□□□□ 0.07
Nup54-201ENSMUST00000038514 Ddx21Q9JIK5 851 aaKnown RBP15.49■□□□□ 0.07
Nup54-201ENSMUST00000038514 Mtm1Q9Z2C5 603 aa15.49■□□□□ 0.07
Nup54-201ENSMUST00000038514 Hcn2O88703 863 aa15.49■□□□□ 0.07
Nup54-201ENSMUST00000038514 Rab17P35292 214 aa15.49■□□□□ 0.07
Nup54-201ENSMUST00000038514 Faf2Q3TDN2 445 aa15.49■□□□□ 0.07
Nup54-201ENSMUST00000038514 Fam172aQ3TNH5 417 aa15.49■□□□□ 0.07
Nup54-201ENSMUST00000038514 Srrm1Q52KI8 946 aaKnown RBP15.49■□□□□ 0.07
Nup54-201ENSMUST00000038514 ProcrQ64695 242 aa15.49■□□□□ 0.07
Nup54-201ENSMUST00000038514 Gucy2gQ6TL19 1100 aa15.49■□□□□ 0.07
Nup54-201ENSMUST00000038514 Cdkn3Q810P3 211 aa15.49■□□□□ 0.07
Nup54-201ENSMUST00000038514 Agbl2Q8CDK2 862 aa15.49■□□□□ 0.07
Nup54-201ENSMUST00000038514 Fam192aQ91WE2 254 aa15.49■□□□□ 0.07
Nup54-201ENSMUST00000038514 SncaipQ99ME3 962 aa15.49■□□□□ 0.07
Nup54-201ENSMUST00000038514 Sytl1Q99N80 567 aa15.49■□□□□ 0.07
Nup54-201ENSMUST00000038514 Ndc80Q9D0F1 642 aaKnown RBP15.49■□□□□ 0.07
Nup54-201ENSMUST00000038514 Msh5Q9QUM7 833 aa15.49■□□□□ 0.07
Nup54-201ENSMUST00000038514 Ripk3Q9QZL0 486 aa15.49■□□□□ 0.07
Nup54-201ENSMUST00000038514 PapolbQ9WVP6 641 aa15.49■□□□□ 0.07
Nup54-201ENSMUST00000038514 Lrrc73B2RWC4 316 aa15.48■□□□□ 0.07
Nup54-201ENSMUST00000038514 Zbed6D2EAC2 980 aa15.48■□□□□ 0.07
Nup54-201ENSMUST00000038514 Vmn2r84D3YWE3 849 aa15.48■□□□□ 0.07
Nup54-201ENSMUST00000038514 PiggD3Z3Y1 983 aa15.48■□□□□ 0.07
Nup54-201ENSMUST00000038514 Gm17535J3KMR8 224 aa15.48■□□□□ 0.07
Nup54-201ENSMUST00000038514 Gm3415J3QMS8 315 aa15.48■□□□□ 0.07
Nup54-201ENSMUST00000038514 Nedd9O35177 833 aa15.48■□□□□ 0.07
Nup54-201ENSMUST00000038514 Shmt1P50431 478 aa15.48■□□□□ 0.07
Nup54-201ENSMUST00000038514 Rpl10aP53026 217 aaKnown RBP15.48■□□□□ 0.07
Nup54-201ENSMUST00000038514 Mbtd1Q6P5G3 631 aa15.48■□□□□ 0.07
Nup54-201ENSMUST00000038514 Rbbp5Q8BX09 538 aaKnown RBP15.48■□□□□ 0.07
Nup54-201ENSMUST00000038514 Q8CIL4 281 aa15.48■□□□□ 0.07
Nup54-201ENSMUST00000038514 Sorcs3Q8VI51 1219 aa15.48■□□□□ 0.07
Nup54-201ENSMUST00000038514 Snrnp25Q8VIK1 123 aa15.48■□□□□ 0.07
Nup54-201ENSMUST00000038514 Lpin3Q99PI4 848 aa15.48■□□□□ 0.07
Nup54-201ENSMUST00000038514 Nde1Q9CZA6 344 aa15.48■□□□□ 0.07
Nup54-201ENSMUST00000038514 Gm3404Q9D506 307 aa15.48■□□□□ 0.07
Nup54-201ENSMUST00000038514 Rnf138rt1Q9D9M9 248 aa15.48■□□□□ 0.07
Nup54-201ENSMUST00000038514 TfebQ9R210 475 aa15.48■□□□□ 0.07
Nup54-201ENSMUST00000038514 Cd97Q9Z0M6 818 aa15.48■□□□□ 0.07
Nup54-201ENSMUST00000038514 Gm15155B1B034 138 aa15.48■□□□□ 0.07
Retrieved 100 of 22,080 RNA–protein pairs in 27.2 ms