RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 ThtpaQ8JZL3 224 aa11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Tspan14Q8QZY6 270 aa11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Rpp40Q8R1F9 363 aa11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Snapc2Q91XA5 359 aa11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Rmi1Q9D4G9 616 aa11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Tmem59Q9QY73 323 aa11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Gm8257E9Q8R3 264 aa11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Gm7942L7N277 499 aa11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 LgmnO89017 435 aa11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Gucy2eP52785 1108 aa11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Mfsd14aP70187 490 aa11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Trim67Q505D9 768 aa11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 ADGRF3Q58Y75 991 aa11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 PterQ60866 349 aa11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Lrrc27Q80YS5 523 aa11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Gstm4Q8R5I6 218 aa11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Ciapin1Q8WTY4 309 aa11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 PigqQ9QYT7 581 aa11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Zscan12Q9Z1D7 501 aa11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Ddx39bQ9Z1N5 428 aaKnown RBP11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Eddm13E9Q7F5 164 aa11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Akap10O88845 662 aa11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 ChrngP04760 519 aa11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Il1rl1P14719 567 aa11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Fam167bP17257 162 aa11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Nyap1Q6PFX7 833 aa11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Acot5Q6Q2Z6 421 aa11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Znf598Q80YR4 908 aaKnown RBP11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 SybuQ8BHS8 665 aa11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 SowahcQ8C0J6 512 aa11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Panx3Q8CEG0 392 aa11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Xpo5Q924C1 1204 aaKnown RBP11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Mettl16Q9CQG2 553 aaKnown RBP11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 PompQ9CQT5 141 aa11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 PolhQ9JJN0 694 aa11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Ripk3Q9QZL0 486 aa11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Gm10406A6NAS4 205 aa11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Gm3373A6NAS7 205 aa11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Gm3252E9PUT9 216 aa11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Gm3002E9PW72 216 aa11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Gm3298E9PW80 205 aa11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Gm3468E9QAJ8 216 aa11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Gm3667K7N757 205 aa11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 ChkaO54804 453 aa11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Magea8O89012 320 aa11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 GfapP03995 430 aa11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Akr1c6P70694 323 aa11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Adcy6Q01341 1165 aa11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Gm3558Q5FWC9 205 aa11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Olfr301Q7TS04 311 aa11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 4930503B20RikQ80ZP0 234 aa11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Afap1l1Q8BZI0 768 aa11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Q9CR55 154 aa11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Znf711A2ANX9 761 aa11.67□□□□□ -0.54
Topbp1-201ENSMUST00000035164 CtshP49935 333 aa11.67□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Psmb4P99026 264 aa11.67□□□□□ -0.54
Topbp1-201ENSMUST00000035164 HmgcrQ01237 887 aa11.67□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Brsk2Q69Z98 735 aa11.67□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Exoc3l1Q8BI71 739 aa11.67□□□□□ -0.54
Topbp1-201ENSMUST00000035164 OgtQ8CGY8 1046 aa11.67□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Olfr397Q8VEZ6 315 aa11.67□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Pcdhb1Q91Y08 818 aa11.67□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Pcdha9Q91Y11 979 aa11.67□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Grk2Q99MK8 689 aa11.67□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Fam155bA2BDP1 471 aa11.67□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Aknad1E9Q8N6 675 aa11.67□□□□□ -0.54
Topbp1-201ENSMUST00000035164 UncxO08934 530 aa11.67□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Psmc3O88685 442 aa11.67□□□□□ -0.54
Topbp1-201ENSMUST00000035164 ErfP70459 551 aa11.67□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Bend4P86174 541 aa11.67□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Klrg2Q3UM83 387 aa11.67□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Pcnx4Q3UVY5 1174 aa11.67□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Tcf12Q61286 706 aa11.67□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Pum3Q8BKS9 647 aaKnown RBP11.67□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Atg14Q8CDJ3 492 aa11.67□□□□□ -0.54
Topbp1-201ENSMUST00000035164 ItpkaQ8R071 459 aa11.67□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Havcr2Q8VIM0 281 aa11.67□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Batf3Q9D275 118 aa11.67□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Olfr271-ps1A0A1L1SQH2 283 aa11.67□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Krt26Q3TRJ4 462 aa11.67□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Ankrd34bQ3UUF8 508 aa11.67□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Krt73Q6NXH9 539 aa11.67□□□□□ -0.54
Topbp1-201ENSMUST00000035164 6820408C15RikQ8BJX2 354 aa11.67□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Taf2Q8C176 1104 aa11.67□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Afg3l2Q8JZQ2 802 aaKnown RBP11.67□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Wdr49A0A0N4SUK7 710 aa11.67□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Olfr600E9PUN7 314 aa11.67□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Kif6E9PX57 802 aa11.67□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Inpp5aE9QAS7 422 aa11.67□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Klhl33G3UW92 533 aa11.67□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Grip2G3XA20 1042 aa11.67□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Vps33bP59016 617 aa11.67□□□□□ -0.54
Topbp1-201ENSMUST00000035164 PrkcbP68404 671 aa11.67□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Armcx5Q3UZB0 606 aa11.67□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Sp140Q6NSQ5 534 aa11.67□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Kcnk18Q6VV64 394 aa11.67□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Baiap2l2Q80Y61 522 aa11.67□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Nup85Q8R480 656 aaKnown RBP11.67□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Smap1Q91VZ6 440 aa11.67□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Ccdc70Q9D9B0 223 aa11.67□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 18.7 ms