RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 F11Q91Y47 624 aa13.15□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Rgs10Q9CQE5 181 aa13.15□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Pgm3Q9CYR6 542 aa13.15□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Plekhg4A0A1L1SU27 1217 aa13.15□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Efna5O08543 228 aa13.15□□□□□ -0.3
Clcn3-201ENSMUST00000004430 SnrpfP62307 86 aaKnown RBP13.15□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Sephs2P97364 452 aa13.15□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Rgl2Q61193 778 aa13.15□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Krt75Q8BGZ7 551 aa13.15□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Afap1l1Q8BZI0 768 aa13.15□□□□□ -0.3
Clcn3-201ENSMUST00000004430 ClyblQ8R4N0 338 aa13.15□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Plekhh3Q8VCE9 796 aa13.15□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Ccdc144bE9PVZ3 520 aa13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Spata31E9QAF0 1014 aa13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Kcnk18Q6VV64 394 aa13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 RfflQ6ZQM0 377 aa13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Phka2Q8BWJ3 1235 aa13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 SgczQ8BX51 311 aa13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 TbcdQ8BYA0 1196 aa13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Taf5Q8C092 801 aa13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Dedd2Q8QZV0 330 aa13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Tmem82Q8R115 356 aa13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Itm2cQ91VK4 269 aa13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Q9DA42 136 aa13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Wdr95D3Z7A8 784 aa13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Mmp15O54732 657 aa13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Ppargc1aO70343 797 aa13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Krt1P04104 637 aa13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 PrkchP23298 683 aa13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Nt5dc3Q3UHB1 546 aa13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Trim67Q505D9 768 aa13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Tcf12Q61286 706 aa13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Frmd5Q6P5H6 517 aa13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Pak5Q8C015 719 aa13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 OgtQ8CGY8 1046 aa13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Mboat7Q8CHK3 473 aa13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Tspan14Q8QZY6 270 aa13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Rbmx2Q8R0F5 326 aaKnown RBP13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Rps6kl1Q8R2S1 544 aa13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Nup85Q8R480 656 aaKnown RBP13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 TgdsQ8VDR7 355 aa13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Olfr395Q8VGR3 312 aa13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Olfr449Q8VGW8 311 aa13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Katnal2Q9D3R6 539 aa13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Poc5Q9DBS8 558 aa13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Mageb4A2A9R3 556 aa13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Armt1A6H630 439 aa13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Gm10406A6NAS4 205 aa13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Gm3373A6NAS7 205 aa13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Gm3252E9PUT9 216 aa13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Gm3002E9PW72 216 aa13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Gm3298E9PW80 205 aa13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Gm3468E9QAJ8 216 aa13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Gm3667K7N757 205 aa13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Tnfrsf11bO08712 401 aa13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 GnazO70443 355 aa13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Psmc3O88685 442 aa13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 IapP03975 557 aa13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Ptpn11P35235 597 aa13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Rpl5P47962 297 aaKnown RBP13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Klrg2Q3UM83 387 aa13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Tars2Q3UQ84 723 aaKnown RBP13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Nxpe4Q52KP5 543 aa13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Gm3558Q5FWC9 205 aa13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Olfr784Q8VFZ9 319 aa13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Ciapin1Q8WTY4 309 aa13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Glra3Q91XP5 464 aa13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Grk2Q99MK8 689 aa13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Nipsnap3bQ9CQE1 247 aa13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 ParvbQ9ES46 365 aa13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 PtsQ9R1Z7 144 aa13.14□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Cyp2a22B2RXZ2 492 aa13.13□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Gm15448F6PZL4 682 aa13.13□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Crabp2P22935 138 aa13.13□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Msx3P70354 204 aa13.13□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Lrrc47Q505F5 581 aaKnown RBP13.13□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Fbxw2Q60584 422 aa13.13□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Creb3l2Q8BH52 521 aa13.13□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Serpina3nQ91WP6 418 aa13.13□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Gprc5dQ9JIL6 344 aa13.13□□□□□ -0.31
Clcn3-201ENSMUST00000004430 DgkeQ9R1C6 564 aa13.13□□□□□ -0.31
Clcn3-201ENSMUST00000004430 CdylQ9WTK2 593 aa13.13□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Bscl2Q9Z2E9 383 aa13.13□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Zfp457L7N1X4 647 aa13.13□□□□□ -0.31
Clcn3-201ENSMUST00000004430 LgmnO89017 435 aa13.13□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Nos2P29477 1144 aa13.13□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Znf354cQ571J5 560 aa13.13□□□□□ -0.31
Clcn3-201ENSMUST00000004430 CttnQ60598 546 aaKnown RBP13.13□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Msantd2Q6NZR2 559 aa13.13□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Elmo2Q8BHL5 732 aa13.13□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Fbxo43Q8CDI2 640 aa13.13□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Lman1lQ8VCD3 505 aa13.13□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Serpina1fQ9DCQ7 411 aa13.13□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Ifi30Q9ESY9 248 aa13.13□□□□□ -0.31
Clcn3-201ENSMUST00000004430 WapP01173 134 aa13.13□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Hspa8P63017 646 aaKnown RBP13.13□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Ubtfl1Q3USZ2 394 aa13.13□□□□□ -0.31
Clcn3-201ENSMUST00000004430 SpdyaQ5IBH7 310 aa13.13□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Grb10Q60760 621 aa13.13□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Pcsk7Q61139 770 aa13.13□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 34.4 ms