RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Arhgap24Q8C4V1 747 aa17.01■□□□□ 0.31
Shh-201ENSMUST00000002708 Agbl2Q8CDK2 862 aa17.01■□□□□ 0.31
Shh-201ENSMUST00000002708 Eif2b5Q8CHW4 717 aa17.01■□□□□ 0.31
Shh-201ENSMUST00000002708 Ero1bQ8R2E9 467 aa17.01■□□□□ 0.31
Shh-201ENSMUST00000002708 Snrnp25Q8VIK1 123 aa17.01■□□□□ 0.31
Shh-201ENSMUST00000002708 Ctu1Q99J10 420 aa17.01■□□□□ 0.31
Shh-201ENSMUST00000002708 Mms19Q9D071 1031 aa17.01■□□□□ 0.31
Shh-201ENSMUST00000002708 Dpp7Q9ET22 506 aa17.01■□□□□ 0.31
Shh-201ENSMUST00000002708 Twf2Q9Z0P5 349 aaKnown RBP17.01■□□□□ 0.31
Shh-201ENSMUST00000002708 F6Y6L6 278 aa17.01■□□□□ 0.31
Shh-201ENSMUST00000002708 Gm20509G3UZF1 325 aa17.01■□□□□ 0.31
Shh-201ENSMUST00000002708 Cyp2c68K7N6C2 491 aa17.01■□□□□ 0.31
Shh-201ENSMUST00000002708 Gjd2O54851 321 aa17.01■□□□□ 0.31
Shh-201ENSMUST00000002708 Glud1P26443 558 aaKnown RBP17.01■□□□□ 0.31
Shh-201ENSMUST00000002708 Hexim2Q3TVI4 313 aa17.01■□□□□ 0.31
Shh-201ENSMUST00000002708 OtulinQ3UCV8 352 aa17.01■□□□□ 0.31
Shh-201ENSMUST00000002708 KizQ3UXL4 695 aa17.01■□□□□ 0.31
Shh-201ENSMUST00000002708 Rcsd1Q3UZA1 412 aa17.01■□□□□ 0.31
Shh-201ENSMUST00000002708 Bnip1Q6QD59 228 aa17.01■□□□□ 0.31
Shh-201ENSMUST00000002708 Entpd3Q8BFW6 529 aa17.01■□□□□ 0.31
Shh-201ENSMUST00000002708 Coq6Q8R1S0 476 aa17.01■□□□□ 0.31
Shh-201ENSMUST00000002708 Olfr615Q8VGY4 313 aa17.01■□□□□ 0.31
Shh-201ENSMUST00000002708 Trps1Q925H1 1281 aa17.01■□□□□ 0.31
Shh-201ENSMUST00000002708 Sytl1Q99N80 567 aa17.01■□□□□ 0.31
Shh-201ENSMUST00000002708 Chst7Q9EP78 484 aa17.01■□□□□ 0.31
Shh-201ENSMUST00000002708 Ptpn4Q9WU22 926 aa17.01■□□□□ 0.31
Shh-201ENSMUST00000002708 Kpna7C0LLJ0 499 aa17■□□□□ 0.31
Shh-201ENSMUST00000002708 Gm5689F6Y2A6 97 aa17■□□□□ 0.31
Shh-201ENSMUST00000002708 AlpiF8VPQ6 554 aa17■□□□□ 0.31
Shh-201ENSMUST00000002708 Spin2fJ3QPU0 254 aa17■□□□□ 0.31
Shh-201ENSMUST00000002708 Lamp1P11438 406 aaKnown RBP17■□□□□ 0.31
Shh-201ENSMUST00000002708 Il1rapl1P59823 695 aa17■□□□□ 0.31
Shh-201ENSMUST00000002708 Cfhr2Q4LDF6 332 aa17■□□□□ 0.31
Shh-201ENSMUST00000002708 Tfdp2Q64163 446 aa17■□□□□ 0.31
Shh-201ENSMUST00000002708 WtipQ7TQJ8 398 aa17■□□□□ 0.31
Shh-201ENSMUST00000002708 Olfr23Q7TRX4 325 aa17■□□□□ 0.31
Shh-201ENSMUST00000002708 Exoc3l1Q8BI71 739 aa17■□□□□ 0.31
Shh-201ENSMUST00000002708 Rsl1d1Q8BVY0 452 aaKnown RBP17■□□□□ 0.31
Shh-201ENSMUST00000002708 Mettl24Q8CCB5 363 aa17■□□□□ 0.31
Shh-201ENSMUST00000002708 Exd1Q8CDF7 570 aa17■□□□□ 0.31
Shh-201ENSMUST00000002708 Dync1li1Q8R1Q8 523 aa17■□□□□ 0.31
Shh-201ENSMUST00000002708 Olfr809Q8VEX8 328 aa17■□□□□ 0.31
Shh-201ENSMUST00000002708 Trim66Q924W6 1242 aa17■□□□□ 0.31
Shh-201ENSMUST00000002708 Tbc1d15Q9CXF4 671 aa17■□□□□ 0.31
Shh-201ENSMUST00000002708 AenQ9CZI9 336 aaKnown RBP17■□□□□ 0.31
Shh-201ENSMUST00000002708 PirQ9D711 290 aa17■□□□□ 0.31
Shh-201ENSMUST00000002708 Tk2Q9R088 270 aa17■□□□□ 0.31
Shh-201ENSMUST00000002708 Krt16Q9Z2K1 469 aa17■□□□□ 0.31
Shh-201ENSMUST00000002708 Mageb4A2A9R3 556 aa17■□□□□ 0.31
Shh-201ENSMUST00000002708 Ism2D3Z6A3 493 aa17■□□□□ 0.31
Shh-201ENSMUST00000002708 HalP35492 657 aa17■□□□□ 0.31
Shh-201ENSMUST00000002708 Lpar1P61793 364 aa17■□□□□ 0.31
Shh-201ENSMUST00000002708 Gabrb2P63137 512 aa17■□□□□ 0.31
Shh-201ENSMUST00000002708 Kcnq1P97414 668 aa17■□□□□ 0.31
Shh-201ENSMUST00000002708 Nlrc4Q3UP24 1024 aa17■□□□□ 0.31
Shh-201ENSMUST00000002708 Tmem45aQ60774 273 aa17■□□□□ 0.31
Shh-201ENSMUST00000002708 Foxn1Q61575 648 aa17■□□□□ 0.31
Shh-201ENSMUST00000002708 Capn11Q6J756 714 aa17■□□□□ 0.31
Shh-201ENSMUST00000002708 Senp5Q6NXL6 749 aa17■□□□□ 0.31
Shh-201ENSMUST00000002708 Tas2r102Q7M717 329 aa17■□□□□ 0.31
Shh-201ENSMUST00000002708 Q8BHN7 327 aa17■□□□□ 0.31
Shh-201ENSMUST00000002708 Lrrc19Q8BZT5 364 aa17■□□□□ 0.31
Shh-201ENSMUST00000002708 Trub1Q8C0D0 338 aaKnown RBP17■□□□□ 0.31
Shh-201ENSMUST00000002708 CntrobQ8CB62 887 aa17■□□□□ 0.31
Shh-201ENSMUST00000002708 Dlk2Q8K1E3 382 aa17■□□□□ 0.31
Shh-201ENSMUST00000002708 Mgat5Q8R4G6 740 aa17■□□□□ 0.31
Shh-201ENSMUST00000002708 Pdk3Q922H2 415 aaKnown RBP17■□□□□ 0.31
Shh-201ENSMUST00000002708 Efcab12V9GXH0 673 aa17■□□□□ 0.31
Shh-201ENSMUST00000002708 Olfr391-psA0A0U1RNJ4 312 aa16.99■□□□□ 0.31
Shh-201ENSMUST00000002708 Kifc5bE9PUA5 672 aa16.99■□□□□ 0.31
Shh-201ENSMUST00000002708 Thumpd3P97770 505 aa16.99■□□□□ 0.31
Shh-201ENSMUST00000002708 Lypla1P97823 230 aa16.99■□□□□ 0.31
Shh-201ENSMUST00000002708 Arhgap1Q5FWK3 439 aa16.99■□□□□ 0.31
Shh-201ENSMUST00000002708 Ecm1Q61508 559 aa16.99■□□□□ 0.31
Shh-201ENSMUST00000002708 Gdpd5Q640M6 607 aa16.99■□□□□ 0.31
Shh-201ENSMUST00000002708 Cand1Q6ZQ38 1230 aa16.99■□□□□ 0.31
Shh-201ENSMUST00000002708 Fcho1Q8K285 873 aa16.99■□□□□ 0.31
Shh-201ENSMUST00000002708 Fam49bQ921M7 324 aa16.99■□□□□ 0.31
Shh-201ENSMUST00000002708 Oma1Q9D8H7 521 aa16.99■□□□□ 0.31
Shh-201ENSMUST00000002708 Ropn1Q9ESG2 212 aa16.99■□□□□ 0.31
Shh-201ENSMUST00000002708 Pcdh15Q99PJ1 1943 aa16.99■□□□□ 0.31
Shh-201ENSMUST00000002708 Sh3pxd2bA2AAY5 908 aa16.99■□□□□ 0.31
Shh-201ENSMUST00000002708 Serpinb3cA2RSF9 386 aa16.99■□□□□ 0.31
Shh-201ENSMUST00000002708 Glb1P23780 647 aa16.99■□□□□ 0.31
Shh-201ENSMUST00000002708 Msx2Q03358 267 aa16.99■□□□□ 0.31
Shh-201ENSMUST00000002708 4930430A15RikQ05AC5 485 aa16.99■□□□□ 0.31
Shh-201ENSMUST00000002708 Hipk4Q3V016 616 aa16.99■□□□□ 0.31
Shh-201ENSMUST00000002708 Cln3Q61124 438 aa16.99■□□□□ 0.31
Shh-201ENSMUST00000002708 Bmp3Q8BHE5 468 aa16.99■□□□□ 0.31
Shh-201ENSMUST00000002708 Kct2Q8K201 259 aa16.99■□□□□ 0.31
Shh-201ENSMUST00000002708 Noxred1Q9D3S5 366 aa16.99■□□□□ 0.31
Shh-201ENSMUST00000002708 Lima1Q9ERG0 753 aaKnown RBP16.99■□□□□ 0.31
Shh-201ENSMUST00000002708 Ccnyl1D3YUJ3 367 aa16.98■□□□□ 0.31
Shh-201ENSMUST00000002708 Cdr1E9Q0B4 517 aa16.98■□□□□ 0.31
Shh-201ENSMUST00000002708 Lzts1P60853 599 aa16.98■□□□□ 0.31
Shh-201ENSMUST00000002708 Ranbp9P69566 653 aa16.98■□□□□ 0.31
Shh-201ENSMUST00000002708 Prdx5P99029 210 aa16.98■□□□□ 0.31
Shh-201ENSMUST00000002708 Fam189a2Q4FZH1 290 aa16.98■□□□□ 0.31
Shh-201ENSMUST00000002708 PapolaQ61183 739 aa16.98■□□□□ 0.31
Shh-201ENSMUST00000002708 Sp140Q6NSQ5 534 aa16.98■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 118.5 ms