RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	BRD2	P25440	801 aa	Known RBP	15.8	■□□□□ 0.12
PHGDH-231	ENST00000641939	PLA2G4A	P47712	749 aa		15.8	■□□□□ 0.12
PHGDH-231	ENST00000641939	CXCL12	P48061	93 aa		15.8	■□□□□ 0.12
PHGDH-231	ENST00000641939	MFAP3	P55082	362 aa		15.8	■□□□□ 0.12
PHGDH-231	ENST00000641939	DHCR24	Q15392	516 aa		15.8	■□□□□ 0.12
PHGDH-231	ENST00000641939	PM20D1	Q6GTS8	502 aa		15.8	■□□□□ 0.12
PHGDH-231	ENST00000641939	TSSK4	Q6SA08	328 aa		15.8	■□□□□ 0.12
PHGDH-231	ENST00000641939	CD101	Q93033	1021 aa		15.8	■□□□□ 0.12
PHGDH-231	ENST00000641939	NKD2	Q969F2	451 aa	Predicted RBP	15.8	■□□□□ 0.12
PHGDH-231	ENST00000641939	ZSWIM1	Q9BR11	485 aa		15.8	■□□□□ 0.12
PHGDH-231	ENST00000641939	ULBP1	Q9BZM6	244 aa		15.8	■□□□□ 0.12
PHGDH-231	ENST00000641939	LRRC4	Q9HBW1	653 aa		15.8	■□□□□ 0.12
PHGDH-231	ENST00000641939	NUDT5	Q9UKK9	219 aa		15.8	■□□□□ 0.12
PHGDH-231	ENST00000641939	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	15.8	■□□□□ 0.12
PHGDH-231	ENST00000641939	CNTN6	Q9UQ52	1028 aa		15.8	■□□□□ 0.12
PHGDH-231	ENST00000641939		R4GN57	208 aa		15.8	■□□□□ 0.12
PHGDH-231	ENST00000641939	GVINP1	Q7Z2Y8	2422 aa		15.79	■□□□□ 0.12
PHGDH-231	ENST00000641939	OTOGL	Q3ZCN5	2332 aa		15.79	■□□□□ 0.12
PHGDH-231	ENST00000641939	GFRA3	O60609	400 aa		15.79	■□□□□ 0.12
PHGDH-231	ENST00000641939	MBD3	O95983	291 aa		15.79	■□□□□ 0.12
PHGDH-231	ENST00000641939	ADH1C	P00326	375 aa		15.79	■□□□□ 0.12
PHGDH-231	ENST00000641939	EGF	P01133	1207 aa		15.79	■□□□□ 0.12
PHGDH-231	ENST00000641939	CALCA	P01258	141 aa		15.79	■□□□□ 0.12
PHGDH-231	ENST00000641939	KRT5	P13647	590 aa		15.79	■□□□□ 0.12
PHGDH-231	ENST00000641939	PRKCSH	P14314	528 aa	Predicted RBP	15.79	■□□□□ 0.12
PHGDH-231	ENST00000641939	SATB1	Q01826	763 aa		15.79	■□□□□ 0.12
PHGDH-231	ENST00000641939	GAB4	Q2WGN9	574 aa		15.79	■□□□□ 0.12
PHGDH-231	ENST00000641939	HSP90AA4P	Q58FG1	418 aa		15.79	■□□□□ 0.12
PHGDH-231	ENST00000641939	RHBDF2	Q6PJF5	856 aa		15.79	■□□□□ 0.12
PHGDH-231	ENST00000641939	HTR3D	Q70Z44	454 aa		15.79	■□□□□ 0.12
PHGDH-231	ENST00000641939	BBS7	Q8IWZ6	715 aa		15.79	■□□□□ 0.12
PHGDH-231	ENST00000641939	KCTD13	Q8WZ19	329 aa		15.79	■□□□□ 0.12
PHGDH-231	ENST00000641939	WBP2	Q969T9	261 aa		15.79	■□□□□ 0.12
PHGDH-231	ENST00000641939	TUBGCP2	Q9BSJ2	902 aa		15.79	■□□□□ 0.12
PHGDH-231	ENST00000641939	FAM126A	Q9BYI3	521 aa	Predicted RBP	15.79	■□□□□ 0.12
PHGDH-231	ENST00000641939	NDST4	Q9H3R1	872 aa		15.79	■□□□□ 0.12
PHGDH-231	ENST00000641939	SEMA4A	Q9H3S1	761 aa		15.79	■□□□□ 0.12
PHGDH-231	ENST00000641939	APEX2	Q9UBZ4	518 aa		15.79	■□□□□ 0.12
PHGDH-231	ENST00000641939	LSM7	Q9UK45	103 aa	Known RBP	15.79	■□□□□ 0.12
PHGDH-231	ENST00000641939	PRR23A	A6NEV1	266 aa		15.78	■□□□□ 0.12
PHGDH-231	ENST00000641939	KCNJ18	B7U540	433 aa		15.78	■□□□□ 0.12
PHGDH-231	ENST00000641939		M0QYV0	167 aa		15.78	■□□□□ 0.12
PHGDH-231	ENST00000641939	MDM4	O15151	490 aa		15.78	■□□□□ 0.12
PHGDH-231	ENST00000641939	GREM1	O60565	184 aa		15.78	■□□□□ 0.12
PHGDH-231	ENST00000641939	PAPSS2	O95340	614 aa	Predicted RBP	15.78	■□□□□ 0.12
PHGDH-231	ENST00000641939	ADH5	P11766	374 aa		15.78	■□□□□ 0.12
PHGDH-231	ENST00000641939	TDGF1	P13385	188 aa		15.78	■□□□□ 0.12
PHGDH-231	ENST00000641939	PON1	P27169	355 aa		15.78	■□□□□ 0.12
PHGDH-231	ENST00000641939	OPRD1	P41143	372 aa		15.78	■□□□□ 0.12
PHGDH-231	ENST00000641939	YWHAG	P61981	247 aa	Known RBP eCLIP	15.78	■□□□□ 0.12
PHGDH-231	ENST00000641939	ADIG	Q0VDE8	80 aa		15.78	■□□□□ 0.12
PHGDH-231	ENST00000641939	KCNJ12	Q14500	433 aa		15.78	■□□□□ 0.12
PHGDH-231	ENST00000641939	FBXO43	Q4G163	708 aa		15.78	■□□□□ 0.12
PHGDH-231	ENST00000641939	VWA3B	Q502W6	1294 aa		15.78	■□□□□ 0.12
PHGDH-231	ENST00000641939	MIIP	Q5JXC2	388 aa		15.78	■□□□□ 0.12
PHGDH-231	ENST00000641939	GJB7	Q6PEY0	223 aa		15.78	■□□□□ 0.12
PHGDH-231	ENST00000641939	SIX6OS1	Q8N1H7	587 aa		15.78	■□□□□ 0.12
PHGDH-231	ENST00000641939	ENOX1	Q8TC92	643 aa	Known RBP	15.78	■□□□□ 0.12
PHGDH-231	ENST00000641939	SLC35F5	Q8WV83	523 aa		15.78	■□□□□ 0.12
PHGDH-231	ENST00000641939	NELL1	Q92832	810 aa		15.78	■□□□□ 0.12
PHGDH-231	ENST00000641939	SECISBP2L	Q93073	1101 aa	Known RBP	15.78	■□□□□ 0.12
PHGDH-231	ENST00000641939	SAMSN1	Q9NSI8	373 aa	Known RBP	15.78	■□□□□ 0.12
PHGDH-231	ENST00000641939	ZSCAN32	Q9NX65	697 aa		15.78	■□□□□ 0.12
PHGDH-231	ENST00000641939	PCDHGA2	Q9Y5H1	932 aa		15.78	■□□□□ 0.12
PHGDH-231	ENST00000641939	GPR179	Q6PRD1	2367 aa		15.78	■□□□□ 0.12
PHGDH-231	ENST00000641939	ATG13	O75143	517 aa		15.77	■□□□□ 0.12
PHGDH-231	ENST00000641939	RNF40	O75150	1001 aa		15.77	■□□□□ 0.12
PHGDH-231	ENST00000641939	EEF1G	P26641	437 aa	Known RBP	15.77	■□□□□ 0.12
PHGDH-231	ENST00000641939	NRL	P54845	237 aa		15.77	■□□□□ 0.12
PHGDH-231	ENST00000641939	COG7	P83436	770 aa		15.77	■□□□□ 0.12
PHGDH-231	ENST00000641939	APBA1	Q02410	837 aa		15.77	■□□□□ 0.12
PHGDH-231	ENST00000641939	EFEMP1	Q12805	493 aa		15.77	■□□□□ 0.12
PHGDH-231	ENST00000641939	ARHGAP44	Q17R89	818 aa		15.77	■□□□□ 0.12
PHGDH-231	ENST00000641939	LY6G5C	Q5SRR4	150 aa		15.77	■□□□□ 0.12
PHGDH-231	ENST00000641939	CCDC183	Q5T5S1	534 aa		15.77	■□□□□ 0.12
PHGDH-231	ENST00000641939	PMF1	Q6P1K2	205 aa		15.77	■□□□□ 0.12
PHGDH-231	ENST00000641939	SASS6	Q6UVJ0	657 aa		15.77	■□□□□ 0.12
PHGDH-231	ENST00000641939	RSRC2	Q7L4I2	434 aa	Known RBP	15.77	■□□□□ 0.12
PHGDH-231	ENST00000641939	BHLHA9	Q7RTU4	235 aa		15.77	■□□□□ 0.12
PHGDH-231	ENST00000641939	ASCL5	Q7RTU5	278 aa		15.77	■□□□□ 0.12
PHGDH-231	ENST00000641939	MIB1	Q86YT6	1006 aa		15.77	■□□□□ 0.12
PHGDH-231	ENST00000641939	SCML4	Q8N228	414 aa		15.77	■□□□□ 0.12
PHGDH-231	ENST00000641939	ZBTB44	Q8NCP5	570 aa		15.77	■□□□□ 0.12
PHGDH-231	ENST00000641939	ATRIP	Q8WXE1	791 aa		15.77	■□□□□ 0.12
PHGDH-231	ENST00000641939	NDRG1	Q92597	394 aa	Known RBP	15.77	■□□□□ 0.12
PHGDH-231	ENST00000641939	CNGB3	Q9NQW8	809 aa		15.77	■□□□□ 0.12
PHGDH-231	ENST00000641939	SPHK2	Q9NRA0	654 aa		15.77	■□□□□ 0.12
PHGDH-231	ENST00000641939	C2orf42	Q9NWW7	574 aa		15.77	■□□□□ 0.12
PHGDH-231	ENST00000641939	RASAL2	Q9UJF2	1139 aa		15.77	■□□□□ 0.12
PHGDH-231	ENST00000641939	NFE2L3	Q9Y4A8	694 aa		15.77	■□□□□ 0.12
PHGDH-231	ENST00000641939	ZNF292	O60281	2723 aa		15.77	■□□□□ 0.11
PHGDH-231	ENST00000641939	SPAG17	Q6Q759	2223 aa		15.76	■□□□□ 0.11
PHGDH-231	ENST00000641939	YJEFN3	A6XGL0	299 aa		15.76	■□□□□ 0.11
PHGDH-231	ENST00000641939		E7ENQ6	273 aa		15.76	■□□□□ 0.11
PHGDH-231	ENST00000641939	MED7	O43513	233 aa		15.76	■□□□□ 0.11
PHGDH-231	ENST00000641939	STC2	O76061	302 aa		15.76	■□□□□ 0.11
PHGDH-231	ENST00000641939	LCP1	P13796	627 aa		15.76	■□□□□ 0.11
PHGDH-231	ENST00000641939	GNA15	P30679	374 aa		15.76	■□□□□ 0.11
PHGDH-231	ENST00000641939	EIF2D	P41214	584 aa	Known RBP	15.76	■□□□□ 0.11
PHGDH-231	ENST00000641939	RGS7	P49802	495 aa		15.76	■□□□□ 0.11

Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms